SRR2936112.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936112.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	476419
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	691	0.1450403951143846	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCG	521	0.10935751932647524	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGATT	20	7.029123E-4	45.000004	19
CGATTAC	20	7.029123E-4	45.000004	10
TTACGAC	20	7.029123E-4	45.000004	13
ACGTTAG	25	3.887355E-5	45.0	1
TACGGGT	25	3.887355E-5	45.0	4
CGCGACA	25	3.887355E-5	45.0	29
GCCGATA	25	3.887355E-5	45.0	9
CGAATAT	25	3.887355E-5	45.0	14
CTCGACA	25	3.887355E-5	45.0	18
CGGTCTA	25	3.887355E-5	45.0	31
AGTACGA	25	3.887355E-5	45.0	45
GCGATTA	70	0.0	41.785713	9
TTAATCG	55	6.002665E-11	40.909092	20
CGTTGAT	55	6.002665E-11	40.909092	25
TAATCGT	55	6.002665E-11	40.909092	21
CGCACGG	40	3.4525328E-7	39.375004	2
TCAACGG	40	3.4525328E-7	39.375004	2
ACGGTTA	40	3.4525328E-7	39.375004	34
AGGGCGA	375	0.0	38.4	6
ACAACGA	65	9.094947E-12	38.076927	13