##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936111.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 269435 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.712709930038784 31.0 31.0 34.0 30.0 34.0 2 31.828381613376138 31.0 31.0 34.0 30.0 34.0 3 31.79151557889658 31.0 31.0 34.0 30.0 34.0 4 35.570055857628 37.0 35.0 37.0 33.0 37.0 5 31.051281385120717 35.0 35.0 37.0 0.0 37.0 6 33.24577727466736 37.0 35.0 37.0 17.0 37.0 7 29.531141091543414 35.0 32.0 37.0 0.0 37.0 8 32.36605860411602 35.0 33.0 37.0 17.0 37.0 9 36.13873475977508 39.0 35.0 39.0 32.0 39.0 10 36.609994989515094 38.0 35.0 39.0 32.0 39.0 11 36.75036650769202 38.0 35.0 39.0 33.0 39.0 12 36.70682724961493 39.0 35.0 39.0 33.0 39.0 13 36.34549705865979 39.0 35.0 39.0 32.0 39.0 14 37.601206227847165 39.0 36.0 41.0 33.0 41.0 15 37.63013342735725 39.0 36.0 41.0 33.0 41.0 16 37.77063113552434 39.0 36.0 41.0 33.0 41.0 17 37.66335108653293 39.0 36.0 41.0 33.0 41.0 18 37.57170003897044 39.0 36.0 41.0 33.0 41.0 19 37.472778221092284 39.0 36.0 41.0 32.0 41.0 20 37.447046597509605 39.0 36.0 41.0 32.0 41.0 21 37.40771243528123 39.0 35.0 41.0 32.0 41.0 22 37.415332083805 39.0 35.0 41.0 32.0 41.0 23 37.44069256035779 39.0 35.0 41.0 33.0 41.0 24 37.34673668973964 39.0 35.0 41.0 32.0 41.0 25 37.260437582348246 39.0 35.0 41.0 32.0 41.0 26 37.00950878690593 39.0 35.0 40.0 32.0 41.0 27 37.013339024254456 39.0 35.0 40.0 32.0 41.0 28 36.85466624603337 39.0 35.0 40.0 31.0 41.0 29 36.80333661179876 39.0 35.0 40.0 31.0 41.0 30 36.72553305992169 39.0 35.0 40.0 31.0 41.0 31 36.460715942620666 39.0 35.0 40.0 30.0 41.0 32 36.41026592684692 39.0 35.0 40.0 30.0 41.0 33 36.275495017351126 38.0 35.0 40.0 30.0 41.0 34 36.065147438157624 38.0 35.0 40.0 30.0 41.0 35 36.06459071761278 38.0 35.0 40.0 30.0 41.0 36 35.66506578581105 38.0 35.0 40.0 27.0 41.0 37 35.60441293818546 38.0 35.0 40.0 27.0 41.0 38 35.37749364410711 38.0 34.0 40.0 26.0 41.0 39 35.23073097407538 38.0 34.0 40.0 26.0 41.0 40 35.124879841149074 38.0 34.0 40.0 25.0 41.0 41 34.83143244196188 38.0 34.0 40.0 23.0 41.0 42 34.86954181899159 38.0 34.0 40.0 24.0 41.0 43 34.58173956612912 38.0 33.0 40.0 23.0 41.0 44 34.32714383803144 38.0 33.0 40.0 22.0 41.0 45 34.222703063818734 37.0 33.0 40.0 22.0 41.0 46 33.899118525804 37.0 33.0 40.0 21.0 41.0 47 33.64528736058789 37.0 32.0 40.0 20.0 41.0 48 33.478093046560396 37.0 32.0 40.0 19.0 41.0 49 33.28684098205504 36.0 32.0 40.0 18.0 41.0 50 33.12786015179913 36.0 31.0 40.0 18.0 41.0 51 30.742049102752055 35.0 27.0 38.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 6.0 10 18.0 11 14.0 12 4.0 13 2.0 14 4.0 15 8.0 16 21.0 17 63.0 18 142.0 19 260.0 20 444.0 21 760.0 22 1223.0 23 1756.0 24 2389.0 25 3095.0 26 3833.0 27 4617.0 28 5324.0 29 6244.0 30 7612.0 31 9258.0 32 11651.0 33 15390.0 34 21375.0 35 25352.0 36 26125.0 37 37874.0 38 44528.0 39 40036.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.53786627572513 18.97080928609869 22.29368864475662 10.197635793419563 2 29.092731085419487 31.175979364225135 22.53567650824874 17.19561304210663 3 29.55072652031102 29.773785885278453 25.090652662052072 15.584834932358454 4 26.875127581791524 24.15907361701338 30.68792101991204 18.277877781283056 5 24.251489227457455 37.56713121903242 20.417911555662776 17.763467997847346 6 23.856959934678123 38.53842299626997 24.152392970475255 13.452224098576652 7 63.69402638855382 19.60881103048973 11.850353517545976 4.84680906341047 8 73.85863009631265 10.710932135765583 9.995731809156197 5.434705958765565 9 68.1875034795034 8.687067381743278 11.11436895726242 12.011060181490897 10 40.535565164139776 26.08792473138234 18.72214077606844 14.65436932840945 11 31.76313396552044 24.764043275743685 25.001206227847163 18.471616530888713 12 30.68346725555329 21.251136637779055 29.15768181565127 18.907714291016386 13 22.798077458385137 26.55000278360272 32.87360587896895 17.778313879043182 14 18.916250672703992 31.29882903112068 26.96346057490675 22.82145972126858 15 16.256239909440126 26.84320893722048 39.84374710041383 17.056804052925568 16 18.973036168278064 26.462040937517394 32.087887616679346 22.477035277525193 17 19.007181695028486 25.063187781839773 30.33421790042125 25.59541262271049 18 20.296917623916716 27.084825653682703 30.379126691038653 22.239130031361924 19 23.336240651734187 28.389778610796668 25.939094772394082 22.334885965075067 20 24.52873605878969 26.69066750793327 31.123647633009817 17.656948800267223 21 22.482231335943734 30.287082227624474 27.5283463544083 19.702340082023493 22 19.174569005511533 25.799914636183125 27.343143986490247 27.682372371815095 23 19.248427264460815 30.60626867333494 28.298847588472174 21.84645647373207 24 21.686863250876833 24.79521962625494 28.4320893722048 25.085827750663427 25 19.270696086254567 32.03184441516507 26.830218791174126 21.86724070740624 26 20.14994340007794 27.3928776884963 28.519308924230337 23.93786998719543 27 22.523057509232284 30.05288845176016 25.39350863844712 22.03054540056043 28 18.68873754337781 28.02828140367807 31.588694861469367 21.694286191474752 29 24.373596600293208 24.954070555050382 26.460556349397812 24.211776495258597 30 23.166255312041866 27.537625030155695 27.530202089557775 21.76591756824466 31 23.293558743296156 28.929426392265295 24.164269675431925 23.612745189006628 32 24.156846734834005 28.359344554345206 24.9073060292835 22.576502681537292 33 21.685007515727357 27.660103550021343 23.940839163434593 26.71404977081671 34 22.543470595876556 26.585632898472728 28.248000445376437 22.62289606027428 35 22.350474140330693 23.996140070889084 28.067251841817136 25.58613394696309 36 23.427542821088572 31.66292426744855 25.217584946276467 19.69194796518641 37 21.661254105814017 27.813016126338447 29.745949858036262 20.77977990981127 38 18.87134188208659 28.294764971143316 26.32805685972498 26.505836287045113 39 22.179004212518787 24.847551357470262 28.741625995137976 24.231818434872977 40 22.060979457011896 23.096479670421438 32.220387106352185 22.62215376621449 41 18.228144079277005 29.194425371610965 29.17438343199659 23.403047117115445 42 20.47284131608737 25.215358064097092 32.42117764952586 21.89062297028968 43 23.341807857182623 26.728524504982648 25.81735854658823 24.112309091246498 44 20.778666468721585 26.271271364150913 27.617421641583313 25.332640525544193 45 20.285783213019837 24.985989199621432 27.14235344331657 27.58587414404216 46 23.718150945497058 28.691521146102026 25.7928628426151 21.79746506578581 47 19.7828789875109 24.801900272793066 33.38764451537477 22.027576224321265 48 21.46603076808878 25.37161096368326 28.13888321858704 25.023475049640915 49 19.371648078386254 23.201885426911872 32.845769851726764 24.580696642975113 50 19.84820086477258 24.27041772598215 30.16237682557945 25.719004583665818 51 20.310278916992967 23.569320986508803 27.14124000222688 28.979160094271343 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 457.0 1 537.0 2 617.0 3 798.5 4 980.0 5 804.0 6 628.0 7 566.5 8 505.0 9 509.5 10 514.0 11 513.5 12 513.0 13 555.0 14 597.0 15 654.0 16 711.0 17 658.5 18 606.0 19 756.5 20 907.0 21 962.0 22 1017.0 23 1158.5 24 1300.0 25 1714.5 26 2578.5 27 3028.0 28 3533.5 29 4039.0 30 4719.0 31 5399.0 32 5946.5 33 6494.0 34 6846.5 35 7199.0 36 7967.0 37 8735.0 38 9387.0 39 10039.0 40 11704.5 41 13370.0 42 14826.0 43 16282.0 44 19652.5 45 23023.0 46 29299.5 47 35576.0 48 30254.0 49 24932.0 50 23557.0 51 22182.0 52 19482.0 53 16782.0 54 14985.5 55 13189.0 56 11864.0 57 10539.0 58 10344.0 59 10149.0 60 9385.5 61 8622.0 62 7610.0 63 6598.0 64 5425.5 65 4253.0 66 3634.0 67 3015.0 68 2405.5 69 1796.0 70 1462.0 71 1128.0 72 884.0 73 640.0 74 501.0 75 305.0 76 248.0 77 209.5 78 171.0 79 113.0 80 55.0 81 52.0 82 49.0 83 41.5 84 34.0 85 23.0 86 12.0 87 10.0 88 8.0 89 5.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 269435.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.71405752732509 #Duplication Level Percentage of deduplicated Percentage of total 1 74.55352226940593 28.11715827733088 2 9.251622982515165 6.978324827673996 3 3.978513474335694 4.501376581330031 4 2.3253224093186793 3.5078937245849136 5 1.6605003080470346 3.1312102070913443 6 1.2076359390484661 2.7326910766403465 7 0.9037275296795855 2.3858262430354293 8 0.6937908235925611 2.0932533626320082 9 0.5328393500566064 1.8085980510771629 >10 4.772561082843745 35.52121258770239 >50 0.07697679165876767 1.9318858481688936 >100 0.0349894507539853 2.929122005156935 >500 0.004998492964855043 1.1944212269709318 >1k 0.002999095778913026 3.167025980604744 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCG 3191 1.1843301723977955 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGC 2817 1.0455211832167313 No Hit GAATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 2392 0.8877836955109767 No Hit GCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 804 0.2984022120362982 TruSeq Adapter, Index 23 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCT 668 0.24792621597045672 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCG 664 0.24644162785087315 No Hit GAATATGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 526 0.19522333772523986 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTC 506 0.187800397127322 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGC 493 0.18297548573867536 No Hit GAATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTT 477 0.1770371332603411 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCG 459 0.170356486722215 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGC 419 0.15551060552637927 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTT 353 0.13101490155325032 No Hit GAACTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCT 344 0.1276745782841873 TruSeq Adapter, Index 20 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 339 0.12581884313470781 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 297 0.1102306678790803 No Hit GAATCTATCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 288 0.10689034461001726 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGACCTTATCGTA 275 0.10206543322137064 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17295451593148625 0.0 2 0.0 0.0 0.0 1.0655631228311095 0.0 3 0.0 0.0 0.0 1.3253660437582349 0.0 4 0.0 0.0 0.0 1.8123109469816467 0.0 5 0.0 0.0 0.0 4.210663054168909 0.0 6 0.0 0.0 0.0 4.937368938705068 0.0 7 0.0 0.0 0.0 5.923506597138457 0.0 8 0.0 0.0 0.0 7.176127823037096 0.0 9 0.0 0.0 0.0 7.548759441052573 0.0 10 0.0 0.0 0.0 10.547256295581494 0.0 11 0.0 0.0 0.0 11.74791693729471 0.0 12 0.0 0.0 0.0 14.387143466884407 0.0 13 0.0 0.0 0.0 14.891903427542822 0.0 14 0.0 0.0 0.0 15.147252584111195 0.0 15 0.0 0.0 0.0 15.644218457141797 0.0 16 0.0 0.0 0.0 16.34457290255535 0.0 17 0.0 0.0 0.0 17.10690890196151 0.0 18 0.0 0.0 0.0 18.003971273219886 0.0 19 0.0 0.0 0.0 18.482008647725795 0.0 20 0.0 0.0 0.0 18.988995490563585 0.0 21 0.0 0.0 0.0 19.564644533932118 0.0 22 0.0 0.0 0.0 20.17443910405107 0.0 23 0.0 0.0 0.0 20.79425464397721 0.0 24 0.0 0.0 0.0 21.27080743036354 0.0 25 0.0 0.0 0.0 21.694657338504648 0.0 26 0.0 0.0 0.0 22.067660103550022 0.0 27 0.0 0.0 0.0 22.458849073060293 0.0 28 0.0 0.0 0.0 22.87490489357359 0.0 29 0.0 0.0 0.0 23.28613580269824 0.0 30 0.0 0.0 0.0 23.77122497077217 0.0 31 0.0 0.0 0.0 24.218828288826618 0.0 32 0.0 0.0 0.0 24.645276226177 0.0 33 0.0 0.0 0.0 25.02310390261102 0.0 34 0.0 0.0 0.0 25.458459368678902 0.0 35 0.0 0.0 0.0 25.909031862972515 0.0 36 0.0 0.0 0.0 26.337335535472377 0.0 37 0.0 0.0 0.0 26.79161950006495 0.0 38 0.0 0.0 0.0 27.202479262159706 0.0 39 0.0 0.0 0.0 27.621504258912168 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGG 50 2.1827873E-11 45.000004 2 GCGTTGG 25 3.8828293E-5 45.000004 2 CGGGAGC 25 3.8828293E-5 45.000004 6 CGATACA 25 3.8828293E-5 45.000004 13 TCTATCT 95 0.0 45.000004 4 TAATACG 80 0.0 45.0 4 CGAGTGA 20 7.023662E-4 45.0 14 CGTGCGG 20 7.023662E-4 45.0 2 CGGCATC 20 7.023662E-4 45.0 41 ACCGACC 20 7.023662E-4 45.0 30 ACGGGTG 40 6.7811925E-9 45.0 5 ACGGGAC 35 1.2072996E-7 45.0 5 CATAGCG 20 7.023662E-4 45.0 1 GTGTACG 20 7.023662E-4 45.0 1 AGCGAGT 20 7.023662E-4 45.0 12 GCGATAT 35 1.2072996E-7 45.0 9 GGTTGAC 20 7.023662E-4 45.0 8 GTTGGCA 20 7.023662E-4 45.0 29 AGAGCGA 20 7.023662E-4 45.0 10 ACGACTC 20 7.023662E-4 45.0 20 >>END_MODULE