##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936110.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 832217 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89810710427689 31.0 31.0 34.0 30.0 34.0 2 32.0275565147071 33.0 31.0 34.0 30.0 34.0 3 31.97305149978912 33.0 31.0 34.0 30.0 34.0 4 35.69627032372566 37.0 35.0 37.0 35.0 37.0 5 31.101990226106892 37.0 35.0 37.0 0.0 37.0 6 33.345254903468685 37.0 35.0 37.0 17.0 37.0 7 29.5851995332948 35.0 32.0 37.0 0.0 37.0 8 32.54774295646448 35.0 33.0 37.0 17.0 37.0 9 36.39184010901003 39.0 35.0 39.0 32.0 39.0 10 36.75981745145797 38.0 35.0 39.0 33.0 39.0 11 36.90883387385742 39.0 37.0 39.0 33.0 39.0 12 36.95265057070451 39.0 37.0 39.0 33.0 39.0 13 36.763180756942 39.0 35.0 39.0 33.0 39.0 14 38.04098209962065 40.0 37.0 41.0 33.0 41.0 15 38.09869300915506 40.0 37.0 41.0 33.0 41.0 16 38.14278727783739 40.0 37.0 41.0 33.0 41.0 17 38.069407378123735 40.0 37.0 41.0 33.0 41.0 18 37.97420144024936 40.0 37.0 41.0 33.0 41.0 19 37.89210987038236 40.0 37.0 41.0 33.0 41.0 20 37.857933687968405 40.0 36.0 41.0 33.0 41.0 21 37.79913772489627 40.0 36.0 41.0 33.0 41.0 22 37.79667682827916 40.0 36.0 41.0 33.0 41.0 23 37.76413964146371 40.0 36.0 41.0 33.0 41.0 24 37.70476570413726 40.0 36.0 41.0 33.0 41.0 25 37.595323094817815 40.0 36.0 41.0 33.0 41.0 26 37.41727097619972 39.0 36.0 41.0 32.0 41.0 27 37.364460230925346 39.0 36.0 41.0 32.0 41.0 28 37.239101099833334 39.0 36.0 41.0 32.0 41.0 29 37.22111300297879 39.0 36.0 41.0 32.0 41.0 30 37.09608070971874 39.0 35.0 41.0 31.0 41.0 31 36.964510458209816 39.0 35.0 41.0 31.0 41.0 32 36.90807085171296 39.0 35.0 41.0 31.0 41.0 33 36.75837191501736 39.0 35.0 41.0 31.0 41.0 34 36.6101425469559 39.0 35.0 41.0 30.0 41.0 35 36.53422124277682 39.0 35.0 41.0 30.0 41.0 36 36.40450507499847 39.0 35.0 40.0 30.0 41.0 37 36.339044984661456 39.0 35.0 40.0 30.0 41.0 38 36.21620202423166 39.0 35.0 40.0 30.0 41.0 39 36.242437969904486 39.0 35.0 40.0 30.0 41.0 40 36.1012692603011 39.0 35.0 40.0 29.0 41.0 41 35.98040895583724 39.0 35.0 40.0 29.0 41.0 42 35.952056975524414 39.0 35.0 40.0 29.0 41.0 43 35.79298428174383 38.0 35.0 40.0 28.0 41.0 44 35.63902083230696 38.0 35.0 40.0 27.0 41.0 45 35.51999899064787 38.0 34.0 40.0 27.0 41.0 46 35.38140533058085 38.0 34.0 40.0 26.0 41.0 47 35.220223811818315 38.0 34.0 40.0 26.0 41.0 48 35.10910255378104 38.0 34.0 40.0 26.0 41.0 49 34.952513587201416 38.0 34.0 40.0 25.0 41.0 50 34.804328678697985 38.0 34.0 40.0 24.0 41.0 51 32.74331574577304 36.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 17.0 9 42.0 10 48.0 11 28.0 12 31.0 13 15.0 14 33.0 15 47.0 16 105.0 17 191.0 18 384.0 19 678.0 20 1125.0 21 1748.0 22 2530.0 23 3711.0 24 5110.0 25 6658.0 26 8344.0 27 10210.0 28 12050.0 29 14600.0 30 18082.0 31 23009.0 32 29764.0 33 42032.0 34 58890.0 35 70484.0 36 82352.0 37 127620.0 38 158466.0 39 153793.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.35645991370039 19.98781567788209 24.455280293481145 11.200444114936369 2 30.655946706207637 27.0472725262762 25.38460521714889 16.912175550367273 3 31.834485476744646 26.478550666472806 25.55331121570456 16.13365264107799 4 28.63039327483096 25.60486027081879 27.182693936797737 18.582052517552512 5 23.432830619898414 39.415561085630316 20.29242373082982 16.859184563641456 6 25.458864695145618 36.4558762918806 23.7096814893231 14.375577523650682 7 68.47480885394074 19.558360379564466 7.924495654378605 4.0423351121161915 8 81.99003384934458 6.830910687957588 7.478698464462995 3.7003569982348354 9 76.06201267217565 8.01329460945883 9.131512574244457 6.793180144121065 10 39.724735255348065 29.03449460897819 17.021161548009715 14.219608587664034 11 29.86552786112276 26.214316698649508 25.958734320495736 17.961421119731995 12 29.2454972681404 23.66798563355471 28.504945224622908 18.581571873681984 13 24.857338891178625 24.54287763888505 30.198974546302225 20.400808923634102 14 20.255053669896192 28.40220759729734 28.51660083848323 22.826137894323235 15 19.856720062195315 27.040903994991687 33.10158288042662 20.000793062386375 16 23.14276204403419 26.066518708461857 29.883912489170495 20.906806758333463 17 22.367964124741505 26.032032510751403 28.415305142769252 23.18469822173784 18 22.96083833903898 27.50712854940478 28.846322533666097 20.68571057789014 19 24.488444720547644 28.41506482083399 26.38446462881676 20.712025829801604 20 25.328129562361738 27.129222306201388 28.50398393688185 19.03866419455503 21 24.699086896806964 28.395478583109934 27.530199455190175 19.37523506489293 22 23.29416486325081 25.08672617838857 27.70984010180037 23.90926885656025 23 22.81135809530447 27.735314226938407 28.404971299552884 21.048356378204243 24 22.860864413968955 25.256633786620558 29.23948921975879 22.6430125796517 25 22.118149473034077 28.553249933611063 26.93684459702217 22.391755996332687 26 21.507851918429928 27.77905281915654 27.338182228913855 23.374913033499674 27 22.152755831712163 28.221365341010817 27.5198656119738 22.106013215303218 28 19.78786782774204 28.239389486155652 29.640947012618103 22.3317956734842 29 21.750577073047054 26.69820491530454 27.919040346448103 23.632177665200302 30 22.63448115094981 26.986951720524814 28.51323633138953 21.865330797135844 31 22.80282666660258 27.898733142918253 26.66203646404724 22.63640372643193 32 23.50444655660723 27.805488232035636 26.757203950411974 21.932861260945163 33 23.118609689540108 27.155898041015746 27.575379979019893 22.150112290424254 34 21.768721379159523 27.272334018651385 28.79549444435766 22.16345015783143 35 22.483318653668455 25.927131986008455 28.60672156420741 22.982827796115675 36 23.25667464134955 29.439797552801732 26.726683064633384 20.576844741215332 37 22.387790684400823 29.379236425115085 27.56168162870982 20.67129126177427 38 21.267770305100715 28.6774963741428 27.533924445186774 22.520808875569713 39 22.93308115551593 27.343949955360202 27.18317458066826 22.53979430845561 40 22.199137965218206 26.14402253258465 30.175062513743413 21.48177698845373 41 20.898876134469734 28.000869965405656 28.397641480527312 22.702612419597294 42 21.708761056311037 26.729326605921294 28.595186111314717 22.96672622645296 43 22.962881075488724 26.348536499494724 27.064695866582873 23.623886558433675 44 21.81570431750373 26.68787107208817 27.385886133063853 24.11053847734425 45 21.33842495406847 26.43361046457835 27.202400335489425 25.02556424586376 46 21.69986914470625 28.44150023371308 26.717550831093334 23.141079790487336 47 20.91882285509669 26.357188089164246 30.257372776571493 22.466616279167575 48 21.204685797093788 26.1091758519713 29.31783417065501 23.368304180279903 49 21.077915976241773 26.14402253258465 29.603576951684474 23.1744845394891 50 20.332917976921884 25.798319428706694 29.99001462358976 23.878747970781657 51 20.473986952922136 24.66508134296704 28.757523578585875 26.10340812552495 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 596.0 1 1189.0 2 1782.0 3 2814.0 4 3846.0 5 2980.0 6 2114.0 7 1760.5 8 1407.0 9 1409.0 10 1411.0 11 1394.5 12 1378.0 13 1433.0 14 1488.0 15 1505.0 16 1522.0 17 1656.5 18 1791.0 19 2012.5 20 2234.0 21 2819.0 22 3404.0 23 3829.0 24 4254.0 25 5548.5 26 8623.5 27 10404.0 28 12127.0 29 13850.0 30 16434.5 31 19019.0 32 21700.0 33 24381.0 34 26319.0 35 28257.0 36 30141.5 37 32026.0 38 35404.5 39 38783.0 40 40536.0 41 42289.0 42 45842.5 43 49396.0 44 54516.5 45 59637.0 46 68034.0 47 76431.0 48 70403.5 49 64376.0 50 61596.0 51 58816.0 52 54598.0 53 50380.0 54 46318.5 55 42257.0 56 40072.5 57 37888.0 58 37022.5 59 36157.0 60 35491.0 61 34825.0 62 31220.0 63 27615.0 64 22913.5 65 18212.0 66 15297.5 67 12383.0 68 10077.5 69 7772.0 70 6493.5 71 5215.0 72 4334.5 73 3454.0 74 2621.5 75 1419.0 76 1049.0 77 858.0 78 667.0 79 518.5 80 370.0 81 268.5 82 167.0 83 142.5 84 118.0 85 102.5 86 87.0 87 63.0 88 39.0 89 27.0 90 15.0 91 12.5 92 10.0 93 7.5 94 5.0 95 5.5 96 6.0 97 3.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 832217.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.456533162033146 #Duplication Level Percentage of deduplicated Percentage of total 1 73.45456799600734 24.57535190061238 2 8.410933648395256 5.628013610623926 3 3.6895533978046178 3.703189968202268 4 2.3148405889745436 3.097861637193886 5 1.6985677997351203 2.841409495989986 6 1.3090077755121947 2.6276917230469787 7 1.051933024695538 2.463582248747487 8 0.8194090790027629 2.1931669619941583 9 0.6312762251384356 1.9008282564672456 >10 6.477414803099554 44.72804260681743 >50 0.10779464844586428 2.306018867662014 >100 0.03027109661150273 2.008364277374866 >500 0.002953277718195337 0.6163051315479056 >1k 0.0014766388590976686 1.3101733137194753 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCG 3516 0.4224859621949564 No Hit GAATCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTC 2857 0.34329988452531013 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGC 2757 0.3312837877620861 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1478 0.17759791016045093 No Hit GCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 964 0.1158351727974795 RNA PCR Primer, Index 27 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2016096763224015E-4 0.0 0.0 0.06392563478035176 0.0 2 1.2016096763224015E-4 0.0 0.0 0.36312644418462975 0.0 3 1.2016096763224015E-4 0.0 0.0 0.4711511540860136 0.0 4 1.2016096763224015E-4 0.0 0.0 0.6940497490438191 0.0 5 1.2016096763224015E-4 0.0 0.0 1.59417555757693 0.0 6 1.2016096763224015E-4 0.0 0.0 1.9806132294822143 0.0 7 1.2016096763224015E-4 0.0 0.0 2.39552905071634 0.0 8 1.2016096763224015E-4 0.0 0.0 3.0081096637055 0.0 9 1.2016096763224015E-4 0.0 0.0 3.2219961860908874 0.0 10 1.2016096763224015E-4 0.0 0.0 4.321469039925884 0.0 11 1.2016096763224015E-4 0.0 0.0 4.950271383545397 0.0 12 1.2016096763224015E-4 0.0 0.0 5.9166058852438725 0.0 13 1.2016096763224015E-4 0.0 0.0 6.161854420181275 0.0 14 1.2016096763224015E-4 0.0 0.0 6.27372428104689 0.0 15 1.2016096763224015E-4 0.0 0.0 6.500468026968927 0.0 16 1.2016096763224015E-4 0.0 0.0 6.9185080333614914 0.0 17 1.2016096763224015E-4 0.0 0.0 7.392422889703046 0.0 18 1.2016096763224015E-4 0.0 0.0 7.908874728586414 0.0 19 1.2016096763224015E-4 0.0 0.0 8.219370668948123 0.0 20 1.2016096763224015E-4 0.0 0.0 8.519773088028723 0.0 21 1.2016096763224015E-4 0.0 0.0 8.889268063497862 0.0 22 1.2016096763224015E-4 0.0 0.0 9.294571007321407 0.0 23 1.2016096763224015E-4 0.0 0.0 9.715855359840042 0.0 24 1.2016096763224015E-4 0.0 0.0 10.043293996637896 0.0 25 1.2016096763224015E-4 0.0 0.0 10.339490781851367 0.0 26 1.2016096763224015E-4 0.0 0.0 10.629078713845066 0.0 27 1.2016096763224015E-4 0.0 0.0 10.903045720046574 0.0 28 1.2016096763224015E-4 0.0 0.0 11.201886046547955 0.0 29 1.2016096763224015E-4 0.0 0.0 11.508176353042536 0.0 30 1.2016096763224015E-4 0.0 0.0 11.862290724654747 0.0 31 2.403219352644803E-4 0.0 0.0 12.172185860178296 0.0 32 2.403219352644803E-4 0.0 0.0 12.494938219238492 0.0 33 2.403219352644803E-4 0.0 0.0 12.813364783463928 0.0 34 3.6048290289672047E-4 0.0 0.0 13.127705874789868 0.0 35 3.6048290289672047E-4 0.0 0.0 13.500805679287975 0.0 36 3.6048290289672047E-4 0.0 0.0 13.82247658963948 0.0 37 3.6048290289672047E-4 0.0 0.0 14.163253093844514 0.0 38 3.6048290289672047E-4 0.0 0.0 14.515324729006977 0.0 39 3.6048290289672047E-4 0.0 0.0 14.871722159004202 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGAACG 35 1.2113924E-7 45.0 1 ATTACGG 55 1.8189894E-12 45.0 2 TACGGGT 135 0.0 45.0 4 TACGCTT 25 3.8898746E-5 45.0 18 GATTACG 25 3.8898746E-5 45.0 1 TCGAACG 35 1.2113924E-7 45.0 1 ACGGGTA 170 0.0 42.35294 5 CGGTCTA 50 1.0804797E-9 40.5 31 TACGGCT 520 0.0 39.80769 7 TAATACG 125 0.0 39.6 4 CACAACG 120 0.0 39.374996 12 CGATTAG 75 0.0 39.0 10 AGATCGG 35 6.2462113E-6 38.571426 2 AACGCCA 35 6.2462113E-6 38.571426 15 GTTCACG 35 6.2462113E-6 38.571426 1 ACGGCTG 650 0.0 38.423073 8 TCGTAAG 65 9.094947E-12 38.07692 1 TCGCTAC 30 1.1396512E-4 37.499996 41 CTTTCGT 30 1.1396512E-4 37.499996 15 CAATACG 30 1.1396512E-4 37.499996 32 >>END_MODULE