SRR2936109.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936109.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	450864
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	726	0.16102416693282232	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACG	20	7.028722E-4	45.0	1
TGCCCTA	20	7.028722E-4	45.0	43
TCACCCG	20	7.028722E-4	45.0	14
TTCGTCA	20	7.028722E-4	45.0	19
ATACTCC	20	7.028722E-4	45.0	27
CTAACGG	25	3.8870217E-5	45.0	2
GTTGTCG	20	7.028722E-4	45.0	37
GTTCGGA	20	7.028722E-4	45.0	45
GCGATAC	20	7.028722E-4	45.0	9
GATTGCG	20	7.028722E-4	45.0	1
TGTAGCG	35	1.2097371E-7	45.0	1
TCATACG	25	3.8870217E-5	45.0	1
TAAACGG	30	2.1625565E-6	44.999996	2
CGAAAGG	60	3.6379788E-12	41.249996	2
TAGACGG	55	6.002665E-11	40.909092	2
CGGGTAT	50	1.0786607E-9	40.5	6
GCGATCA	50	1.0786607E-9	40.5	9
ATGGGCG	95	0.0	40.26316	5
TCAAGCG	95	0.0	40.26316	17
ACGGGAA	165	0.0	39.545456	5