SRR2936108.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936108.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	595376
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1319	0.22154067345677353	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCACG	35	1.2106102E-7	45.000004	1
CCCGTAT	20	7.030543E-4	45.000004	17
TCGACAA	20	7.030543E-4	45.000004	19
TCGGTAA	20	7.030543E-4	45.000004	27
GTCGGTA	20	7.030543E-4	45.000004	26
TACGGGT	50	2.1827873E-11	45.0	4
CGATATG	25	3.8885333E-5	45.0	10
GCGATAT	65	0.0	41.538464	9
CGGGTAT	55	6.002665E-11	40.90909	6
ACTACGG	45	1.9255822E-8	40.0	2
CACGACG	40	3.4544792E-7	39.375004	26
TGCGATA	40	3.4544792E-7	39.375004	1
CGGTCTA	40	3.4544792E-7	39.375004	31
GACCGAT	300	0.0	39.000004	9
GTATGCG	35	6.2432155E-6	38.57143	1
CGAATAT	105	0.0	38.571426	14
CGTTATT	100	0.0	38.25	1
TTCGTAC	30	1.1392613E-4	37.499996	33
CGGCTAT	30	1.1392613E-4	37.499996	41
TTTGACG	30	1.1392613E-4	37.499996	1