##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936108.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 595376 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.92263208459864 31.0 31.0 34.0 30.0 34.0 2 32.067656405364005 33.0 31.0 34.0 30.0 34.0 3 31.962675687296766 33.0 31.0 34.0 30.0 34.0 4 35.70621758351025 37.0 35.0 37.0 35.0 37.0 5 31.267415885087743 37.0 35.0 37.0 0.0 37.0 6 33.454077759264734 37.0 35.0 37.0 17.0 37.0 7 29.433688962941066 35.0 32.0 37.0 0.0 37.0 8 32.54698207519282 35.0 33.0 37.0 17.0 37.0 9 36.43752687377388 39.0 35.0 39.0 32.0 39.0 10 36.8028741501169 38.0 35.0 39.0 33.0 39.0 11 36.94618022896455 39.0 37.0 39.0 33.0 39.0 12 36.87313731154766 39.0 35.0 39.0 33.0 39.0 13 36.627284270780144 39.0 35.0 39.0 33.0 39.0 14 37.715606608261 40.0 37.0 41.0 33.0 41.0 15 37.85139306925372 40.0 37.0 41.0 33.0 41.0 16 37.94859718900325 40.0 37.0 41.0 33.0 41.0 17 37.933190118513345 40.0 36.0 41.0 33.0 41.0 18 37.83606829969633 40.0 36.0 41.0 33.0 41.0 19 37.754723065760125 40.0 36.0 41.0 33.0 41.0 20 37.67582502485824 40.0 36.0 41.0 33.0 41.0 21 37.56405531966354 39.0 36.0 41.0 33.0 41.0 22 37.54605828921555 39.0 35.0 41.0 33.0 41.0 23 37.511859732337214 39.0 35.0 41.0 33.0 41.0 24 37.46345838596114 39.0 35.0 41.0 33.0 41.0 25 37.29271922281046 39.0 35.0 41.0 32.0 41.0 26 37.13093910402838 39.0 35.0 41.0 32.0 41.0 27 37.05661296390852 39.0 35.0 41.0 32.0 41.0 28 36.846156042568055 39.0 35.0 41.0 31.0 41.0 29 36.740207868640994 39.0 35.0 41.0 31.0 41.0 30 36.61312683077585 39.0 35.0 41.0 31.0 41.0 31 36.49002815027814 39.0 35.0 40.0 30.0 41.0 32 36.371647496707965 39.0 35.0 40.0 30.0 41.0 33 36.210619843594635 39.0 35.0 40.0 30.0 41.0 34 36.034672207143046 39.0 35.0 40.0 29.0 41.0 35 35.87768065894493 38.0 35.0 40.0 28.0 41.0 36 35.76168001397436 38.0 35.0 40.0 28.0 41.0 37 35.63522379135202 38.0 34.0 40.0 27.0 41.0 38 35.43168350756497 38.0 34.0 40.0 26.0 41.0 39 35.370224866302976 38.0 34.0 40.0 26.0 41.0 40 35.202957458815945 38.0 34.0 40.0 25.0 41.0 41 35.06225981564591 38.0 34.0 40.0 25.0 41.0 42 35.01484943968182 38.0 34.0 40.0 24.0 41.0 43 34.876768630243745 38.0 34.0 40.0 24.0 41.0 44 34.707336204348174 38.0 34.0 40.0 24.0 41.0 45 34.57476619816721 37.0 33.0 40.0 23.0 41.0 46 34.490276732686574 37.0 33.0 40.0 23.0 41.0 47 34.34262046169143 37.0 33.0 40.0 23.0 41.0 48 34.214874297922655 37.0 33.0 40.0 23.0 41.0 49 34.03064785950391 37.0 33.0 40.0 23.0 41.0 50 33.831536709575126 36.0 33.0 40.0 22.0 41.0 51 31.877571484238533 35.0 29.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 14.0 9 25.0 10 33.0 11 37.0 12 29.0 13 32.0 14 34.0 15 55.0 16 92.0 17 193.0 18 394.0 19 727.0 20 1294.0 21 1952.0 22 2841.0 23 3694.0 24 4976.0 25 6461.0 26 7918.0 27 9120.0 28 10230.0 29 11602.0 30 14182.0 31 17644.0 32 22658.0 33 32077.0 34 45547.0 35 51985.0 36 60489.0 37 90430.0 38 106185.0 39 92411.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.903644083738676 20.118378973959313 24.920218483781678 12.05775845852033 2 32.38356937464728 24.50820993792158 25.72441616726237 17.383804520168766 3 33.520330009943294 23.958809223079196 26.314127542930855 16.20673322404665 4 29.047190346940422 25.46575609362823 26.359141114186663 19.127912445244686 5 22.041197495364273 39.480933057429255 22.017011098868615 16.460858348337855 6 26.174551879820484 35.092949665421514 24.594709897610922 14.13778855714708 7 69.78682378866465 19.972084867377927 6.553505683803176 3.6875856601542556 8 85.05163123807476 4.877925882131628 6.771519174437667 3.2989237053559433 9 79.14242428314208 7.031019053505684 9.05696568219075 4.7695909811614845 10 44.17259009432695 25.401091075219696 16.476310768321195 13.950008062132166 11 34.41942570745209 24.405081830641475 22.58068850608691 18.594803955819515 12 31.507316384939937 21.901117948993576 27.685865738625676 18.90569992744081 13 27.4943900997017 22.854968960791165 29.101273816882106 20.549367122625032 14 22.09998387573567 25.59038322001559 30.3611499287845 21.948482975464245 15 22.01751498212894 25.075078605788608 32.41884120287012 20.488565209212332 16 26.361492569401523 23.950075246566875 29.812085136115662 19.87634704791594 17 27.41460858348338 22.930383488753325 26.552296363978396 23.102711563784904 18 27.743308430302864 23.3131668055145 28.447233344978635 20.496291419204 19 28.08863642471312 25.184589234366182 25.56854827873478 21.15822606218591 20 28.781475907661715 25.844004461046467 25.277135793179433 20.097383838112385 21 27.95208406116471 25.513121120098898 27.338858133347664 19.19593668538873 22 26.557167235494884 22.80054956867593 27.870119050818303 22.772164145010883 23 25.58920749240816 24.55255166483029 27.67931525624143 22.178925586520116 24 25.03661551691704 24.102415952272178 28.562958533766896 22.298009997043884 25 25.65622396603155 24.872349574050684 26.71605842358443 22.755368036333344 26 23.91480341834404 25.483559968826423 26.166825669828814 24.434810943000727 27 24.02683346322324 25.01310096476848 27.65798419822096 23.30208137378732 28 21.936053855042864 26.11207035554003 28.40121200720217 23.550663782214937 29 23.746170487221523 26.539699282470234 27.71912203380721 21.995008196501033 30 25.704428797936096 24.68003412969283 27.97929375722233 21.636243315148747 31 27.199618392410844 25.102960146193332 26.609739055655584 21.08768240574024 32 26.643163311923896 25.849211254736502 26.01566069173094 21.491964741608662 33 26.61948079868856 24.957169922872268 26.088891725565023 22.334457552874152 34 24.28952460293999 24.90409421945124 28.751578834215692 22.05480234339308 35 24.058242186450244 26.045221843003414 27.968880169842254 21.927655800704095 36 26.6164574991266 26.599493429362287 25.77010158286528 21.013947488645833 37 24.841444734084007 27.601549273064418 25.420910483459192 22.136095509392383 38 25.255132890811854 27.641859933890515 24.580601166321784 22.52240600897584 39 24.815410765633818 24.80466125608019 25.62212786541614 24.75780011286985 40 26.573963344172423 23.733573405713365 27.687041466233104 22.00542178388111 41 23.23472897799038 24.31774206551826 27.51471339120153 24.932815565289836 42 24.34041681223294 24.522654591384267 27.01334954717691 24.12357904920588 43 23.85400150493134 24.698341888151354 27.416624116524684 24.031032490392626 44 23.693598667060815 24.667437048184677 27.23791352019564 24.401050764558867 45 23.583584155222916 24.43145172126522 26.425821665636505 25.55914245787536 46 24.012388809760555 25.29426782403053 26.343856655290104 24.349486710918814 47 24.016419875843166 25.628174464540056 27.82241810217409 22.53298755744269 48 23.377831823923035 25.906318024240143 27.660335653435812 23.05551449840101 49 23.926224772244765 25.071383461879552 27.759936577893633 23.242455187982046 50 21.989633441724223 26.073607266668457 28.388279003520466 23.548480288086857 51 23.358684260030635 24.7574641906963 26.33915374486039 25.544697804412674 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 396.0 1 822.0 2 1248.0 3 2253.0 4 3258.0 5 2527.0 6 1796.0 7 1518.5 8 1241.0 9 1244.5 10 1248.0 11 1246.0 12 1244.0 13 1259.5 14 1275.0 15 1316.5 16 1358.0 17 1461.0 18 1564.0 19 1610.5 20 1657.0 21 1706.5 22 1756.0 23 2052.0 24 2348.0 25 2790.5 26 4206.0 27 5179.0 28 6260.0 29 7341.0 30 8068.0 31 8795.0 32 10445.5 33 12096.0 34 13781.5 35 15467.0 36 15807.5 37 16148.0 38 17452.5 39 18757.0 40 20734.5 41 22712.0 42 25245.5 43 27779.0 44 29491.5 45 31204.0 46 34025.0 47 36846.0 48 39981.5 49 43117.0 50 44562.5 51 46008.0 52 45439.0 53 44870.0 54 42905.5 55 40941.0 56 39315.5 57 37690.0 58 37008.5 59 36327.0 60 34856.0 61 33385.0 62 30807.5 63 28230.0 64 24689.5 65 21149.0 66 17411.0 67 13673.0 68 11287.5 69 8902.0 70 7443.5 71 5985.0 72 4938.0 73 3891.0 74 3172.0 75 1868.0 76 1283.0 77 988.0 78 693.0 79 530.5 80 368.0 81 289.5 82 211.0 83 164.0 84 117.0 85 86.5 86 56.0 87 44.5 88 33.0 89 27.5 90 22.0 91 16.0 92 10.0 93 7.5 94 5.0 95 6.5 96 8.0 97 5.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 595376.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.67147840142747 #Duplication Level Percentage of deduplicated Percentage of total 1 74.07887008162943 27.90660554282255 2 8.150067808002337 6.140502067986588 3 3.774545133386219 4.265780864027165 4 2.514510218372552 3.7890126952636107 5 1.8074770412892238 3.4045166161001514 6 1.290344780872855 2.9165517325827857 7 0.9887335351813653 2.6072937810746284 8 0.7932605366336377 2.390663773799908 9 0.6306088260473395 2.1380370093172694 >10 5.903522364820311 41.62671898710729 >50 0.04537311584481623 1.131025516321304 >100 0.022232826761546694 1.4578383901875063 >500 0.0 0.0 >1k 4.537311583989121E-4 0.2254530234092298 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1319 0.22154067345677353 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04669318212356561 0.0 2 0.0 0.0 0.0 0.2275872725806885 0.0 3 0.0 0.0 0.0 0.3250047029104297 0.0 4 0.0 0.0 0.0 0.4477842573432587 0.0 5 0.0 0.0 0.0 0.8115879712988094 0.0 6 0.0 0.0 0.0 1.1197965655316977 0.0 7 0.0 0.0 0.0 1.383663432855876 0.0 8 0.0 0.0 0.0 1.8474039934427993 0.0 9 0.0 0.0 0.0 2.0511407917013784 0.0 10 0.0 0.0 0.0 2.535372604874903 0.0 11 0.0 0.0 0.0 3.1613635752868774 0.0 12 0.0 0.0 0.0 3.6953118701459244 0.0 13 0.0 0.0 0.0 3.958003009862675 0.0 14 0.0 0.0 0.0 4.096402945365618 0.0 15 0.0 0.0 0.0 4.264531993227809 0.0 16 0.0 0.0 0.0 4.607844454596759 0.0 17 0.0 0.0 0.0 4.994322915266991 0.0 18 0.0 0.0 0.0 5.431525624143399 0.0 19 0.0 0.0 0.0 5.687498320389132 0.0 20 0.0 0.0 0.0 5.964466152481793 0.0 21 0.0 0.0 0.0 6.309122302544947 0.0 22 0.0 0.0 0.0 6.6465561258767565 0.0 23 0.0 0.0 0.0 6.999946252452232 0.0 24 0.0 0.0 0.0 7.272211174115181 0.0 25 0.0 0.0 0.0 7.53456639165838 0.0 26 0.0 0.0 0.0 7.775254629007551 0.0 27 0.0 0.0 0.0 8.041137029373035 0.0 28 1.6796108677541587E-4 0.0 0.0 8.301140791701378 0.0 29 1.6796108677541587E-4 0.0 0.0 8.578276584880815 0.0 30 1.6796108677541587E-4 0.0 0.0 8.971641450108839 0.0 31 1.6796108677541587E-4 0.0 0.0 9.285896643465643 0.0 32 3.3592217355083175E-4 0.0 0.0 9.556481954260837 0.0 33 3.3592217355083175E-4 0.0 0.0 9.845375023514553 0.0 34 3.3592217355083175E-4 0.0 0.0 10.168868076644003 0.0 35 3.3592217355083175E-4 0.0 0.0 10.529312568864045 0.0 36 3.3592217355083175E-4 0.0 0.0 10.844575528741501 0.0 37 3.3592217355083175E-4 0.0 0.0 11.17176372578001 0.0 38 3.3592217355083175E-4 0.0 0.0 11.52834511300422 0.0 39 3.3592217355083175E-4 0.0 0.0 12.122759399102415 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 35 1.2106102E-7 45.000004 1 CCCGTAT 20 7.030543E-4 45.000004 17 TCGACAA 20 7.030543E-4 45.000004 19 TCGGTAA 20 7.030543E-4 45.000004 27 GTCGGTA 20 7.030543E-4 45.000004 26 TACGGGT 50 2.1827873E-11 45.0 4 CGATATG 25 3.8885333E-5 45.0 10 GCGATAT 65 0.0 41.538464 9 CGGGTAT 55 6.002665E-11 40.90909 6 ACTACGG 45 1.9255822E-8 40.0 2 CACGACG 40 3.4544792E-7 39.375004 26 TGCGATA 40 3.4544792E-7 39.375004 1 CGGTCTA 40 3.4544792E-7 39.375004 31 GACCGAT 300 0.0 39.000004 9 GTATGCG 35 6.2432155E-6 38.57143 1 CGAATAT 105 0.0 38.571426 14 CGTTATT 100 0.0 38.25 1 TTCGTAC 30 1.1392613E-4 37.499996 33 CGGCTAT 30 1.1392613E-4 37.499996 41 TTTGACG 30 1.1392613E-4 37.499996 1 >>END_MODULE