SRR2936106.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936106.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	208898
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	313	0.14983389022393703	No Hit
GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC	251	0.1201543336939559	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTCGT	20	7.0200197E-4	45.000004	43
CATATGC	20	7.0200197E-4	45.000004	33
CCCTCGT	40	6.7684596E-9	45.000004	14
TAGGTCC	20	7.0200197E-4	45.000004	6
GGATCGT	20	7.0200197E-4	45.000004	8
CATCTCG	20	7.0200197E-4	45.000004	42
CCTCGTG	40	6.7684596E-9	45.000004	15
GTTAACG	20	7.0200197E-4	45.000004	1
CGTAGGT	20	7.0200197E-4	45.000004	39
CTACGAA	35	1.2055534E-7	45.000004	11
TACGAAT	35	1.2055534E-7	45.000004	12
GCCCTCG	40	6.7684596E-9	45.000004	13
CGAATAT	35	1.2055534E-7	45.000004	14
GCGATAA	35	1.2055534E-7	45.000004	9
GTATCCC	20	7.0200197E-4	45.000004	39
GCTACGA	35	1.2055534E-7	45.000004	10
ATTATAC	35	1.2055534E-7	45.000004	42
GCATCAA	20	7.0200197E-4	45.000004	44
GCATATG	20	7.0200197E-4	45.000004	32
GCGAGAC	25	3.8798134E-5	45.0	21