SRR2936104.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936104.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	612989
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3074	0.5014771880082677	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCG	1944	0.3171345652205831	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC	1798	0.2933168458161566	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGC	1528	0.2492703784244089	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1019	0.1662346306377439	No Hit
GCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC	715	0.11664157105592432	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGCGG	75	0.0	45.000004	2
AGATCGA	25	3.888668E-5	45.0	30
GTCGAGT	20	7.030708E-4	45.0	13
CGCATCG	25	3.888668E-5	45.0	21
ACTTACG	25	3.888668E-5	45.0	1
AAACGGT	20	7.030708E-4	45.0	20
TATTACG	20	7.030708E-4	45.0	1
ATCGGCA	20	7.030708E-4	45.0	38
CGCCGTA	20	7.030708E-4	45.0	35
AATCGGC	20	7.030708E-4	45.0	37
CAGACGA	25	3.888668E-5	45.0	1
AGGTACG	30	2.1638389E-6	44.999996	1
TTAACGG	65	0.0	44.999996	2
TATAGCG	30	2.1638389E-6	44.999996	1
TCGACAC	30	2.1638389E-6	44.999996	34
TTACGGG	205	0.0	41.707317	3
CGCACGG	65	0.0	41.53846	2
ATTACGG	60	3.6379788E-12	41.249996	2
CGTTATT	320	0.0	40.78125	1
CGAACTT	50	1.0804797E-9	40.5	12