##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936099.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 311409 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.864522219974376 31.0 31.0 34.0 30.0 34.0 2 31.99338169417069 33.0 31.0 34.0 30.0 34.0 3 31.92277037593647 33.0 31.0 34.0 30.0 34.0 4 35.667713521446075 37.0 35.0 37.0 33.0 37.0 5 31.29231974669968 37.0 35.0 37.0 0.0 37.0 6 33.436287968555824 37.0 35.0 37.0 17.0 37.0 7 29.384092945290597 35.0 32.0 37.0 0.0 37.0 8 32.47402611999011 35.0 33.0 37.0 17.0 37.0 9 36.34889807295229 39.0 35.0 39.0 32.0 39.0 10 36.757524670128355 38.0 35.0 39.0 33.0 39.0 11 36.896255406876485 39.0 37.0 39.0 33.0 39.0 12 36.835162117986314 39.0 35.0 39.0 33.0 39.0 13 36.57325896168704 39.0 35.0 39.0 32.0 39.0 14 37.81161430787164 40.0 36.0 41.0 33.0 41.0 15 37.914177175354595 40.0 36.0 41.0 33.0 41.0 16 37.993680336791805 40.0 36.0 41.0 33.0 41.0 17 37.94615441429117 40.0 36.0 41.0 33.0 41.0 18 37.86600579944703 40.0 36.0 41.0 33.0 41.0 19 37.74518077512211 40.0 36.0 41.0 33.0 41.0 20 37.69143473695365 39.0 36.0 41.0 33.0 41.0 21 37.58154709722584 39.0 36.0 41.0 33.0 41.0 22 37.55275537958119 39.0 35.0 41.0 33.0 41.0 23 37.52443570995058 39.0 35.0 41.0 33.0 41.0 24 37.446258778648016 39.0 35.0 41.0 33.0 41.0 25 37.32218079760058 39.0 35.0 41.0 32.0 41.0 26 37.13108805461628 39.0 35.0 41.0 32.0 41.0 27 37.09075524471033 39.0 35.0 41.0 32.0 41.0 28 36.9596286555623 39.0 35.0 41.0 31.0 41.0 29 36.936813001551016 39.0 35.0 41.0 31.0 41.0 30 36.80469414821023 39.0 35.0 40.0 31.0 41.0 31 36.641320578403324 39.0 35.0 40.0 31.0 41.0 32 36.55071947182002 39.0 35.0 40.0 30.0 41.0 33 36.37640530620502 39.0 35.0 40.0 30.0 41.0 34 36.22571280855723 39.0 35.0 40.0 30.0 41.0 35 36.15903522377324 39.0 35.0 40.0 30.0 41.0 36 35.928248701867965 38.0 35.0 40.0 29.0 41.0 37 35.826417990488395 38.0 35.0 40.0 29.0 41.0 38 35.653282339302976 38.0 35.0 40.0 27.0 41.0 39 35.66296735161797 38.0 35.0 40.0 27.0 41.0 40 35.477054291944036 38.0 34.0 40.0 27.0 41.0 41 35.386013249456504 38.0 34.0 40.0 26.0 41.0 42 35.384182859198035 38.0 34.0 40.0 27.0 41.0 43 35.20335635771606 38.0 34.0 40.0 26.0 41.0 44 35.05207620845897 38.0 34.0 40.0 26.0 41.0 45 34.87473708210103 38.0 34.0 40.0 24.0 41.0 46 34.74851722333009 37.0 34.0 40.0 24.0 41.0 47 34.571229476347824 37.0 33.0 40.0 23.0 41.0 48 34.474273383235555 37.0 33.0 40.0 23.0 41.0 49 34.330632704899344 37.0 33.0 40.0 23.0 41.0 50 34.13816556361569 37.0 33.0 40.0 23.0 41.0 51 31.921842335963316 35.0 29.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 12.0 10 21.0 11 17.0 12 6.0 13 11.0 14 7.0 15 20.0 16 39.0 17 63.0 18 177.0 19 305.0 20 438.0 21 769.0 22 1204.0 23 1638.0 24 2289.0 25 2954.0 26 3584.0 27 4327.0 28 4919.0 29 5929.0 30 7487.0 31 9381.0 32 12132.0 33 17338.0 34 25022.0 35 29636.0 36 31111.0 37 45875.0 38 55501.0 39 49183.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.182759650491796 20.41045698743453 24.9816158171408 11.42516754493287 2 31.2948566033737 27.96964763381919 23.806633719642015 16.9288620431651 3 32.065547238519116 25.89905879406183 25.072814208966342 16.96257975845271 4 28.71593306551834 26.216005317765383 26.886506170341896 18.181555446374382 5 23.411012526934034 38.85597397634622 20.622718033197497 17.11029546352225 6 25.496694058296328 36.210578371209564 24.67173395759275 13.62099361290136 7 67.16922118500108 20.94705034215453 7.835033669547123 4.048694803297272 8 80.97357494484744 7.034157651191841 7.990135159870139 4.00213224409057 9 74.83534515701216 8.284282085617308 9.890208696601576 6.990164060768957 10 42.06172589745319 26.98765931620473 16.952625004415413 13.997989781926663 11 33.63326043884409 26.036177502898116 23.29733565825008 17.033226400007706 12 30.171896123747228 23.537213118439094 28.370085642996827 17.920805114816847 13 23.853838521044672 26.79627114181029 29.83182888098931 19.51806145615573 14 20.34944397881885 30.244469491890086 28.869107829253487 20.536978700037572 15 19.62692150837002 25.80143798027674 36.143464061732324 18.428176449620917 16 22.142905311021842 24.75490432196886 32.529888346194234 20.57230202081507 17 21.690124562873905 24.326207656169217 29.48630257956578 24.497365201391098 18 22.77776172172288 26.389089589575125 29.577179850293344 21.255968838408652 19 24.691001223471385 27.650453262429796 26.9966507069481 20.661894807150723 20 26.452992688072598 26.600708393142135 27.802664662871013 19.14363425591425 21 23.884987267548468 28.15204441747027 28.16745823017318 19.795510084808082 22 22.618485657126158 25.367924498007444 27.407364591261015 24.606225253605388 23 22.08381902899402 28.179018589700362 27.636966176314747 22.100196204990862 24 22.40172891599151 25.436965534072552 29.60672299130725 22.554582558628685 25 21.29032879589222 28.15043881198039 28.187688859345748 22.371543532781647 26 20.47371784373605 29.580712182371094 27.8395935891384 22.105976384754456 27 21.913624847066078 28.676435170467133 27.489892713441165 21.920047269025623 28 19.542466659602002 27.276347183286287 31.291966513491904 21.889219643619807 29 20.89791881416401 25.651153306423385 30.554672472536122 22.896255406876488 30 21.614982225947227 26.986053710714845 28.90892684540267 22.490037217935253 31 25.326499876368374 27.202810451849498 25.900022157355764 21.570667514426365 32 24.53461524875646 27.365939969621945 25.922821755312146 22.176623026309453 33 23.343255975260828 26.63603171391964 26.828062130510038 23.192650180309496 34 21.8596765026059 27.174230674129525 28.725887819555634 22.240205003708947 35 21.773294927250014 25.015975774624366 28.835068992867903 24.375660305257714 36 22.850977332061696 26.764159032012564 29.801001255583493 20.583862380342254 37 22.59343821148393 27.37172014938554 28.042542123060027 21.992299516070503 38 22.3073193131862 27.39676759502776 27.3919507785581 22.90396231322794 39 22.49292730781705 26.320369674607992 28.28145621995511 22.90524679761985 40 23.64799989724125 25.26773471543854 29.95610274590651 21.128162641413702 41 20.84140150092001 25.95300713852201 29.343403690965904 23.862187669592082 42 21.822426455240535 25.249751933951813 29.524515990225076 23.40330562058258 43 23.707728421465017 24.13064490750107 28.78946979695513 23.372156874078783 44 21.664113753937748 26.044205530347547 28.247096262471537 24.04458445324316 45 21.153531208153904 26.887148412537854 27.33928691848983 24.62003346081841 46 22.904925676521874 27.71178739214345 27.64403084047025 21.739256090864426 47 21.304779245301194 26.346380483544152 30.52545045262019 21.823389818534466 48 22.09955396279491 24.50410874444862 29.32574203057715 24.07059526217932 49 21.52795840839539 23.749474164202063 31.111175335330703 23.611392092071842 50 19.69243021235738 25.603306262824777 29.9506436872409 24.75361983757695 51 20.130118268900386 25.295030008766606 27.971253239309075 26.603598483023934 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 400.0 1 653.0 2 906.0 3 1239.5 4 1573.0 5 1245.5 6 918.0 7 830.5 8 743.0 9 739.5 10 736.0 11 818.0 12 900.0 13 878.5 14 857.0 15 939.5 16 1022.0 17 981.0 18 940.0 19 1122.0 20 1304.0 21 1872.5 22 2441.0 23 2224.5 24 2008.0 25 2352.0 26 3002.0 27 3308.0 28 3873.5 29 4439.0 30 5232.5 31 6026.0 32 6601.0 33 7176.0 34 7849.5 35 8523.0 36 9087.5 37 9652.0 38 10717.5 39 11783.0 40 13640.5 41 15498.0 42 17353.0 43 19208.0 44 21982.0 45 24756.0 46 26812.5 47 28869.0 48 27657.5 49 26446.0 50 25319.5 51 24193.0 52 21542.0 53 18891.0 54 17007.5 55 15124.0 56 14355.5 57 13587.0 58 13379.0 59 13171.0 60 12388.5 61 11606.0 62 10992.5 63 10379.0 64 8768.5 65 7158.0 66 5738.0 67 4318.0 68 3789.5 69 3261.0 70 2924.0 71 2587.0 72 2103.0 73 1619.0 74 1277.5 75 788.0 76 640.0 77 537.0 78 434.0 79 327.5 80 221.0 81 144.0 82 67.0 83 56.0 84 45.0 85 31.5 86 18.0 87 17.5 88 17.0 89 12.0 90 7.0 91 3.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 311409.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.75201650864902 #Duplication Level Percentage of deduplicated Percentage of total 1 73.58686542286455 28.5163942368658 2 9.022221916638578 6.992585853165463 3 4.10301181372905 4.769999446224302 4 2.5484594395053213 3.950317690853305 5 1.8200354006602555 3.5265020946355916 6 1.2594401021342192 2.928350617773592 7 0.9273008361573881 2.5154344117878598 8 0.7294040667135652 2.2612702747807845 9 0.6052116793069504 2.1107855688957122 >10 5.317740923115709 38.30272542483213 >50 0.05050322009940036 1.2836661602863313 >100 0.02649349251116084 1.7803208006570488 >500 0.0024837649229213286 0.6917231296119296 >1k 8.279216409737762E-4 0.36992428963012747 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCG 1153 0.3702526259677787 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGC 819 0.26299817924337443 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTC 776 0.24918997203035234 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 561 0.18014893596524187 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 388 0.12459498601517617 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 312 0.10018978256890457 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.211210979772582E-4 0.0 0.0 0.07161000484892859 0.0 2 3.211210979772582E-4 0.0 0.0 0.4248432126239126 0.0 3 3.211210979772582E-4 0.0 0.0 0.6065977540790407 0.0 4 3.211210979772582E-4 0.0 0.0 0.8898265624949825 0.0 5 3.211210979772582E-4 0.0 0.0 1.910349411866709 0.0 6 3.211210979772582E-4 0.0 0.0 2.3884987267548463 0.0 7 3.211210979772582E-4 0.0 0.0 2.9244498392788905 0.0 8 3.211210979772582E-4 0.0 0.0 3.771888416840875 0.0 9 3.211210979772582E-4 0.0 0.0 4.132507409869336 0.0 10 3.211210979772582E-4 0.0 0.0 5.511401404583682 0.0 11 3.211210979772582E-4 0.0 0.0 6.619911434801178 0.0 12 3.211210979772582E-4 0.0 0.0 7.884807439733598 0.0 13 3.211210979772582E-4 0.0 0.0 8.26854715181642 0.0 14 3.211210979772582E-4 0.0 0.0 8.422043036649551 0.0 15 3.211210979772582E-4 0.0 0.0 8.742200771332877 0.0 16 3.211210979772582E-4 0.0 0.0 9.35907440054719 0.0 17 3.211210979772582E-4 0.0 0.0 10.036318796181227 0.0 18 3.211210979772582E-4 0.0 0.0 10.798660282779238 0.0 19 3.211210979772582E-4 0.0 0.0 11.213869862463834 0.0 20 6.422421959545164E-4 0.0 0.0 11.59728845344868 0.0 21 6.422421959545164E-4 0.0 0.0 12.099200729587135 0.0 22 6.422421959545164E-4 0.0 0.0 12.622306998192089 0.0 23 9.633632939317746E-4 0.0 0.0 13.160827079499951 0.0 24 9.633632939317746E-4 0.0 0.0 13.592092714083408 0.0 25 9.633632939317746E-4 0.0 0.0 13.951106101621983 0.0 26 9.633632939317746E-4 0.0 0.0 14.303054825005058 0.0 27 9.633632939317746E-4 0.0 0.0 14.63059834494186 0.0 28 9.633632939317746E-4 0.0 0.0 14.990896216872345 0.0 29 9.633632939317746E-4 0.0 0.0 15.364681174917873 0.0 30 9.633632939317746E-4 0.0 0.0 15.790487750835718 0.0 31 0.0012844843919090328 0.0 0.0 16.178402037192246 0.0 32 0.0012844843919090328 0.0 0.0 16.52200161202791 0.0 33 0.0012844843919090328 0.0 0.0 16.863995581373693 0.0 34 0.0012844843919090328 0.0 0.0 17.25801116859179 0.0 35 0.0012844843919090328 0.0 0.0 17.668082810708746 0.0 36 0.0012844843919090328 0.0 0.0 18.063704003416728 0.0 37 0.0012844843919090328 0.0 0.0 18.434277750482483 0.0 38 0.0012844843919090328 0.0 0.0 18.8379269706399 0.0 39 0.0012844843919090328 0.0 0.0 19.21235417088138 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGT 20 7.025357E-4 45.0 11 TTTACGG 20 7.025357E-4 45.0 2 GCGCGAC 25 3.884235E-5 45.0 9 CGTTGAT 20 7.025357E-4 45.0 25 AAGACGT 20 7.025357E-4 45.0 18 CGATTGG 20 7.025357E-4 45.0 2 CGCGACC 25 3.884235E-5 45.0 10 CTACGAG 20 7.025357E-4 45.0 34 TCTCGTC 20 7.025357E-4 45.0 12 AATCTCG 20 7.025357E-4 45.0 10 CGGTGTA 20 7.025357E-4 45.0 32 CGCAGCG 20 7.025357E-4 45.0 15 ATGCGAC 20 7.025357E-4 45.0 11 CGGTCAA 25 3.884235E-5 45.0 22 GACGACC 20 7.025357E-4 45.0 24 ATTGCGG 20 7.025357E-4 45.0 2 CAATCAC 20 7.025357E-4 45.0 42 GGCCTAT 20 7.025357E-4 45.0 8 AGTACGG 45 3.8198777E-10 45.0 2 AGGCGAT 30 2.1603864E-6 44.999996 7 >>END_MODULE