##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936098.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 749271 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.887497314055928 31.0 31.0 34.0 30.0 34.0 2 32.024810782747494 33.0 31.0 34.0 30.0 34.0 3 31.95716770033806 33.0 31.0 34.0 30.0 34.0 4 35.69147878404476 37.0 35.0 37.0 35.0 37.0 5 31.14638228357964 37.0 35.0 37.0 0.0 37.0 6 33.36203322963254 37.0 35.0 37.0 17.0 37.0 7 29.496166273617956 35.0 32.0 37.0 0.0 37.0 8 32.49773579919682 35.0 33.0 37.0 17.0 37.0 9 36.36304754888418 39.0 35.0 39.0 32.0 39.0 10 36.74557936981412 38.0 35.0 39.0 33.0 39.0 11 36.89606163857937 39.0 37.0 39.0 33.0 39.0 12 36.86813983191662 39.0 35.0 39.0 33.0 39.0 13 36.683587113340835 39.0 35.0 39.0 33.0 39.0 14 37.93142668006636 40.0 37.0 41.0 33.0 41.0 15 37.996934353524956 40.0 37.0 41.0 33.0 41.0 16 38.04549221843632 40.0 37.0 41.0 33.0 41.0 17 37.96199105530576 40.0 37.0 41.0 33.0 41.0 18 37.859578176654374 40.0 36.0 41.0 33.0 41.0 19 37.78869461116205 40.0 36.0 41.0 33.0 41.0 20 37.76107576564421 40.0 36.0 41.0 33.0 41.0 21 37.69912354808874 40.0 36.0 41.0 33.0 41.0 22 37.69139470231732 39.0 36.0 41.0 33.0 41.0 23 37.64502963547235 39.0 36.0 41.0 33.0 41.0 24 37.57884263504126 39.0 36.0 41.0 33.0 41.0 25 37.44995335466073 39.0 35.0 41.0 32.0 41.0 26 37.28075422644143 39.0 35.0 41.0 32.0 41.0 27 37.23814080619696 39.0 35.0 41.0 32.0 41.0 28 37.111229448357136 39.0 35.0 41.0 32.0 41.0 29 37.089177347048 39.0 35.0 41.0 32.0 41.0 30 36.96297200879255 39.0 35.0 41.0 31.0 41.0 31 36.8375581064795 39.0 35.0 41.0 31.0 41.0 32 36.75240333604263 39.0 35.0 41.0 31.0 41.0 33 36.59399603080861 39.0 35.0 40.0 30.0 41.0 34 36.46606234593358 39.0 35.0 40.0 30.0 41.0 35 36.369469791303814 39.0 35.0 40.0 30.0 41.0 36 36.26968079640077 39.0 35.0 40.0 30.0 41.0 37 36.21181121383318 39.0 35.0 40.0 30.0 41.0 38 36.10495935382525 39.0 35.0 40.0 29.0 41.0 39 36.105928295636694 39.0 35.0 40.0 29.0 41.0 40 35.95989168138097 38.0 35.0 40.0 29.0 41.0 41 35.86424404521195 38.0 35.0 40.0 29.0 41.0 42 35.83101975119816 38.0 35.0 40.0 29.0 41.0 43 35.71017162014812 38.0 35.0 40.0 28.0 41.0 44 35.55901402830218 38.0 34.0 40.0 27.0 41.0 45 35.42849649859664 38.0 34.0 40.0 27.0 41.0 46 35.29305551662883 38.0 34.0 40.0 26.0 41.0 47 35.1258676767151 38.0 34.0 40.0 26.0 41.0 48 35.029551390618344 38.0 34.0 40.0 26.0 41.0 49 34.9029496670764 38.0 34.0 40.0 26.0 41.0 50 34.73865530629105 37.0 34.0 40.0 24.0 41.0 51 32.62674786559202 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 19.0 9 40.0 10 45.0 11 29.0 12 26.0 13 21.0 14 32.0 15 62.0 16 87.0 17 197.0 18 385.0 19 643.0 20 1050.0 21 1657.0 22 2445.0 23 3337.0 24 4608.0 25 5986.0 26 7708.0 27 9056.0 28 10798.0 29 13193.0 30 16728.0 31 21300.0 32 28057.0 33 40040.0 34 57101.0 35 66415.0 36 74718.0 37 114141.0 38 139708.0 39 129616.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.86944109674604 20.521813869748062 24.304290436971403 11.304454596534498 2 32.32715532831245 25.891299676619006 24.951853201311675 16.829691793756865 3 32.14431093689733 26.025696977462093 26.027832386412925 15.80215969922765 4 28.6377025135098 25.706720265431333 27.228599532078512 18.426977688980354 5 23.4427863883695 38.76381175836246 20.973052473671075 16.82034937959697 6 25.35157506429583 36.699805544322416 23.842641714413077 14.105977676968681 7 68.11260545249984 19.751331627675434 7.824805711151239 4.3112572086734975 8 81.80991924150274 6.516734265706267 7.785300645560818 3.8880458472301744 9 76.18178202546208 7.638491280191012 9.409279152669727 6.770447541677177 10 41.4907289885769 26.470662817592032 17.189775128091174 14.8488330657399 11 32.217849082641656 25.085049334619917 24.3885056274699 18.308595955268522 12 30.061086042299785 23.163448204988583 27.898450627343113 18.877015125368523 13 25.178606939278314 24.32511067424203 29.605042768237393 20.891239618242267 14 21.066076226091763 27.42318867272322 28.656654267948444 22.854080833236573 15 20.86067657763346 26.248713749764775 33.24978545813197 19.6408242144698 16 24.585497103184295 24.668511126147948 30.176931977882504 20.569059792785254 17 23.14756610091676 25.20890305376826 28.52265735628364 23.12087348903134 18 24.072998954984246 26.561284234943034 28.471674467582492 20.894042342490234 19 24.94891701400428 28.044459214356355 25.669350608791746 21.337273162847623 20 25.922396569465523 26.87572320295327 27.659418287909183 19.54246193967203 21 25.491177424456573 27.68103930353637 27.129569941983604 19.69821333002345 22 23.558899250071068 25.101732217048305 27.64700622338246 23.692362309498165 23 23.336149403887248 26.91202515511744 28.526527785007026 21.22529765598829 24 24.508488917894862 24.379163213310004 28.59072351659146 22.521624352203677 25 22.925617033089495 26.77816170651206 27.27971588383909 23.016505376559348 26 21.888342135222103 26.456916122471043 27.91833662319775 23.736405119109108 27 22.102416882543167 26.917363677494528 27.824111703242217 23.15610773672009 28 19.993834006654467 27.22766529066252 29.9715323294242 22.806968373258808 29 22.98874506019851 25.906381002334268 27.942493436954052 23.162380500513166 30 23.46507471929382 26.051855737109804 28.784778804998457 21.698290738597915 31 24.480328212355744 24.982015852742197 28.012428080093848 22.525227854808207 32 25.19101900380503 26.17944642192211 27.242346227199505 21.387188347073355 33 23.56664010751784 25.37386339522015 27.380213567587695 23.67928292967431 34 21.90916237249273 25.29645482075244 29.72596030007834 23.06842250667649 35 21.97989779398909 26.388716499103797 28.38932775991597 23.242057946991142 36 22.130844514201137 28.34435070888904 26.774558203907535 22.750246573002293 37 22.85648316830626 28.124003197774904 28.529730898433275 20.48978273548556 38 21.697489960241352 27.892845178847175 26.555545323387662 23.854119537523808 39 23.16264742663202 25.99219774954589 28.01055959726187 22.834595226560218 40 23.085906167461438 25.515334238212876 28.373045266665862 23.02571432765982 41 19.84395499091784 26.810059377715138 28.452856176203266 24.893129455163752 42 20.883899149973775 26.63028463666684 28.184195037576526 24.301621175782863 43 22.3449192615222 24.769676125193687 27.410776608196503 25.474628005087613 44 21.639033140212284 25.50599182405298 28.1555004797997 24.699474555935037 45 21.78410748580954 25.16125674155279 28.101981792969433 24.952653979668238 46 22.91667500810788 27.059902224962663 27.02426758809563 22.999155178833828 47 21.091968059620616 24.85963022724755 30.236323039327562 23.812078673804272 48 21.069546265636866 24.863500655970938 29.57474665374744 24.492206424644756 49 21.634495396191767 24.404387731541725 29.937232323151434 24.023884549115074 50 20.147449988055055 24.4505659501035 30.19828606739084 25.203697994450607 51 20.128765159735263 24.138662780222376 29.09561427040417 26.636957789638195 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 707.0 1 1062.0 2 1417.0 3 2446.0 4 3475.0 5 2669.5 6 1864.0 7 1622.5 8 1381.0 9 1357.5 10 1334.0 11 1332.0 12 1330.0 13 1410.0 14 1490.0 15 1464.5 16 1439.0 17 1521.0 18 1603.0 19 1932.5 20 2262.0 21 2747.0 22 3232.0 23 3403.0 24 3574.0 25 4479.0 26 6430.0 27 7476.0 28 9446.5 29 11417.0 30 13007.5 31 14598.0 32 16341.5 33 18085.0 34 20326.0 35 22567.0 36 24533.0 37 26499.0 38 28107.0 39 29715.0 40 32426.5 41 35138.0 42 38522.5 43 41907.0 44 46835.0 45 51763.0 46 59907.0 47 68051.0 48 63502.5 49 58954.0 50 56819.0 51 54684.0 52 51055.0 53 47426.0 54 44689.0 55 41952.0 56 39497.0 57 37042.0 58 36339.0 59 35636.0 60 34433.0 61 33230.0 62 30419.5 63 27609.0 64 23228.5 65 18848.0 66 15649.0 67 12450.0 68 10300.5 69 8151.0 70 7029.0 71 5907.0 72 4983.5 73 4060.0 74 3296.5 75 1894.0 76 1255.0 77 1001.5 78 748.0 79 597.0 80 446.0 81 361.5 82 277.0 83 226.0 84 175.0 85 134.0 86 93.0 87 64.0 88 35.0 89 31.0 90 27.0 91 20.5 92 14.0 93 11.0 94 8.0 95 4.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 749271.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.83508732370542 #Duplication Level Percentage of deduplicated Percentage of total 1 73.3732016247652 24.82588684193776 2 8.396277086028844 5.6817753679962575 3 3.6493045563069377 3.70423615000324 4 2.380497946753791 3.2217742360926396 5 1.749338136576097 2.9594504304870184 6 1.3357159281107396 2.7116439040374667 7 1.0684298506428676 2.5305292107028476 8 0.8109356354211644 2.1950462430703714 9 0.6974697336896399 2.1239054410527483 >10 6.421261545055201 44.41505874253356 >50 0.08735952353858864 1.8399270857919061 >100 0.02449332414398155 1.5924119222600102 >500 0.0040822206906635915 0.833291796946365 >1k 0.0016328882762654364 1.3650626270878379 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCG 3247 0.43335455395978223 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTC 3079 0.41093275997603007 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGC 2233 0.29802301170070644 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1324 0.17670509068147572 No Hit GCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 824 0.10997356096792749 TruSeq Adapter, Index 23 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6692611885419294E-4 0.0 0.0 0.07020156925865274 0.0 2 2.6692611885419294E-4 0.0 0.0 0.37169462050446367 0.0 3 2.6692611885419294E-4 0.0 0.0 0.4962156549499447 0.0 4 2.6692611885419294E-4 0.0 0.0 0.7427219257117919 0.0 5 2.6692611885419294E-4 0.0 0.0 1.706992530072564 0.0 6 2.6692611885419294E-4 0.0 0.0 2.1450182911122946 0.0 7 2.6692611885419294E-4 0.0 0.0 2.5962568950353075 0.0 8 2.6692611885419294E-4 0.0 0.0 3.3002745335132415 0.0 9 2.6692611885419294E-4 0.0 0.0 3.562395982228059 0.0 10 2.6692611885419294E-4 0.0 0.0 4.723524599243798 0.0 11 2.6692611885419294E-4 0.0 0.0 5.403652350084282 0.0 12 2.6692611885419294E-4 0.0 0.0 6.348036958590416 0.0 13 2.6692611885419294E-4 0.0 0.0 6.6056206632847125 0.0 14 2.6692611885419294E-4 0.0 0.0 6.730008234670767 0.0 15 2.6692611885419294E-4 0.0 0.0 6.974779485660061 0.0 16 2.6692611885419294E-4 0.0 0.0 7.377170609832757 0.0 17 2.6692611885419294E-4 0.0 0.0 7.8381520170939485 0.0 18 2.6692611885419294E-4 0.0 0.0 8.329696464963945 0.0 19 2.6692611885419294E-4 0.0 0.0 8.643067728498767 0.0 20 2.6692611885419294E-4 0.0 0.0 8.949231986824527 0.0 21 2.6692611885419294E-4 0.0 0.0 9.336274859163106 0.0 22 2.6692611885419294E-4 0.0 0.0 9.73466209155299 0.0 23 2.6692611885419294E-4 0.0 0.0 10.12303959448584 0.0 24 2.6692611885419294E-4 0.0 0.0 10.445486346061704 0.0 25 2.6692611885419294E-4 0.0 0.0 10.746045155891526 0.0 26 4.0038917828128943E-4 0.0 0.0 11.02952069411468 0.0 27 4.0038917828128943E-4 0.0 0.0 11.32047016366575 0.0 28 4.0038917828128943E-4 0.0 0.0 11.614222357464788 0.0 29 4.0038917828128943E-4 0.0 0.0 11.905972605372423 0.0 30 4.0038917828128943E-4 0.0 0.0 12.242166052069278 0.0 31 5.338522377083859E-4 0.0 0.0 12.568750158487383 0.0 32 5.338522377083859E-4 0.0 0.0 12.892665003716946 0.0 33 5.338522377083859E-4 0.0 0.0 13.20643665643005 0.0 34 5.338522377083859E-4 0.0 0.0 13.525012979282529 0.0 35 5.338522377083859E-4 0.0 0.0 13.876955066991783 0.0 36 5.338522377083859E-4 0.0 0.0 14.190192867467179 0.0 37 5.338522377083859E-4 0.0 0.0 14.513440397399606 0.0 38 5.338522377083859E-4 0.0 0.0 14.859777036612922 0.0 39 5.338522377083859E-4 0.0 0.0 15.209984104549623 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATT 20 7.031712E-4 45.0 42 TACGCTA 20 7.031712E-4 45.0 1 CCGCGAT 20 7.031712E-4 45.0 41 ACATCGC 20 7.031712E-4 45.0 20 TACCGTA 20 7.031712E-4 45.0 18 TACGGGT 60 3.6379788E-12 41.249996 4 GGCGATA 195 0.0 40.384617 8 GTTACGG 85 0.0 39.705883 2 TTGTCGC 40 3.45608E-7 39.375 38 TAGACGG 110 0.0 38.863632 2 TTACGGG 210 0.0 38.57143 3 CGATCAT 35 6.24538E-6 38.571426 10 GCGTAAC 35 6.24538E-6 38.571426 32 CGAATAT 125 0.0 37.800003 14 GCTACGA 125 0.0 37.800003 10 TAACGGG 275 0.0 37.636364 3 CGTGCGG 60 1.546141E-10 37.499996 2 ACACGAC 170 0.0 37.058823 26 CACGACC 170 0.0 37.058823 27 TCAAGCG 170 0.0 37.058823 17 >>END_MODULE