SRR2936094.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936094.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	323311
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCG	887	0.2743488467760144	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGC	664	0.20537501043886536	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTC	568	0.17568223784529446	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	433	0.1339267763855854	No Hit
GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC	351	0.10856419979524358	No Hit
GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	342	0.10578050236459632	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACGGGT	30	2.1606447E-6	45.000004	4
TACCCGT	20	7.025757E-4	45.0	35
GCGAATG	25	3.8845657E-5	45.0	1
CCAGGCG	20	7.025757E-4	45.0	17
ATTACGG	20	7.025757E-4	45.0	2
GGGTACG	20	7.025757E-4	45.0	7
CACGACC	25	3.8845657E-5	45.0	27
GTTACAA	35	1.2083001E-7	45.0	9
AGCGATG	45	3.8380676E-10	45.0	1
CATACGG	25	3.8845657E-5	45.0	2
ACGCTCA	20	7.025757E-4	45.0	26
TATAGCG	35	1.2083001E-7	45.0	1
ATGCGCG	20	7.025757E-4	45.0	16
CCGAATG	25	3.8845657E-5	45.0	37
ACCCGTC	20	7.025757E-4	45.0	36
TAGGCGT	20	7.025757E-4	45.0	45
CGTTTTA	20	7.025757E-4	45.0	1
AATACGG	20	7.025757E-4	45.0	2
TACGGGA	90	0.0	42.5	4
GCGATGA	90	0.0	42.5	9