SRR2936085.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936085.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	407885
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	443	0.1086090442158942	No Hit
GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC	431	0.10566703850349976	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGGTT	25	3.8863654E-5	45.0	23
CTATGCG	20	7.027929E-4	45.0	1
TGGACGC	20	7.027929E-4	45.0	37
TAGCGAC	20	7.027929E-4	45.0	21
ATAGCGA	20	7.027929E-4	45.0	20
ACCGACA	25	3.8863654E-5	45.0	19
TTCGTTA	20	7.027929E-4	45.0	38
ACGATAT	25	3.8863654E-5	45.0	32
GGTATAC	25	3.8863654E-5	45.0	8
GCGATCA	20	7.027929E-4	45.0	9
TTAACGG	25	3.8863654E-5	45.0	2
CGGCTTA	20	7.027929E-4	45.0	23
ACACTCG	20	7.027929E-4	45.0	34
CCACGTT	25	3.8863654E-5	45.0	39
CGATCAT	20	7.027929E-4	45.0	10
ATACCCG	20	7.027929E-4	45.0	30
CGCAGTA	75	0.0	42.000004	37
TTACGGG	125	0.0	41.399998	3
CGTATGG	55	6.002665E-11	40.909092	2
CGATTTG	55	6.002665E-11	40.909092	10