##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936083.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 175650 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.751710788499857 31.0 31.0 34.0 30.0 34.0 2 31.89029319669798 31.0 31.0 34.0 30.0 34.0 3 31.852211784799316 33.0 31.0 34.0 30.0 34.0 4 35.59638485624822 37.0 35.0 37.0 33.0 37.0 5 31.140563620836893 37.0 35.0 37.0 0.0 37.0 6 33.328323370338744 37.0 35.0 37.0 17.0 37.0 7 29.46719612866496 35.0 32.0 37.0 0.0 37.0 8 32.514489040705946 35.0 33.0 37.0 17.0 37.0 9 36.38061485909479 39.0 35.0 39.0 32.0 39.0 10 36.667856532877884 38.0 35.0 39.0 32.0 39.0 11 36.828454312553376 39.0 37.0 39.0 33.0 39.0 12 36.65672075149445 38.0 35.0 39.0 33.0 39.0 13 36.263672075149444 38.0 35.0 39.0 32.0 39.0 14 37.43598633646456 39.0 36.0 41.0 33.0 41.0 15 37.60263592371193 39.0 36.0 41.0 33.0 41.0 16 37.73835468260746 39.0 36.0 41.0 33.0 41.0 17 37.74515229148876 39.0 36.0 41.0 33.0 41.0 18 37.64319385140905 39.0 36.0 41.0 33.0 41.0 19 37.54615997722744 39.0 36.0 41.0 33.0 41.0 20 37.480626245374324 39.0 35.0 41.0 33.0 41.0 21 37.39346996868773 39.0 35.0 41.0 33.0 41.0 22 37.368021633931114 39.0 35.0 41.0 33.0 41.0 23 37.31615713065756 39.0 35.0 41.0 33.0 41.0 24 37.2801024765158 39.0 35.0 41.0 32.0 41.0 25 37.16699117563336 39.0 35.0 41.0 32.0 41.0 26 36.963649302590376 39.0 35.0 40.0 32.0 41.0 27 36.95173925419869 39.0 35.0 40.0 32.0 41.0 28 36.890964987190436 39.0 35.0 40.0 31.0 41.0 29 36.90596071733561 39.0 35.0 40.0 31.0 41.0 30 36.794659834898944 39.0 35.0 40.0 31.0 41.0 31 36.63353259322516 39.0 35.0 40.0 31.0 41.0 32 36.51806433247936 38.0 35.0 40.0 31.0 41.0 33 36.36750925135212 38.0 35.0 40.0 30.0 41.0 34 36.25759180187874 38.0 35.0 40.0 30.0 41.0 35 36.17519499003701 38.0 35.0 40.0 30.0 41.0 36 35.99797893538286 38.0 35.0 40.0 30.0 41.0 37 35.828858525476804 38.0 35.0 40.0 29.0 41.0 38 35.690253344719615 38.0 35.0 40.0 29.0 41.0 39 35.57417022487902 38.0 35.0 40.0 27.0 41.0 40 35.3575974950185 38.0 34.0 40.0 26.0 41.0 41 35.297107884998574 38.0 34.0 40.0 26.0 41.0 42 35.18649587247367 38.0 34.0 40.0 26.0 41.0 43 34.94328494164532 38.0 34.0 40.0 24.0 41.0 44 34.58438941076003 38.0 34.0 40.0 23.0 41.0 45 34.41310560774267 37.0 33.0 40.0 23.0 41.0 46 34.1577853686308 37.0 33.0 40.0 22.0 41.0 47 33.99320808425847 37.0 33.0 40.0 22.0 41.0 48 33.91914602903501 37.0 33.0 40.0 21.0 41.0 49 33.72788499857671 37.0 33.0 40.0 20.0 41.0 50 33.5402220324509 36.0 33.0 40.0 19.0 41.0 51 31.461855963563906 35.0 29.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 11.0 10 11.0 11 7.0 12 3.0 13 5.0 14 5.0 15 6.0 16 21.0 17 46.0 18 71.0 19 159.0 20 273.0 21 386.0 22 640.0 23 902.0 24 1361.0 25 1708.0 26 2236.0 27 2582.0 28 3115.0 29 3842.0 30 4675.0 31 5656.0 32 7527.0 33 10634.0 34 15142.0 35 17654.0 36 16617.0 37 24523.0 38 29687.0 39 26139.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.786507258753204 22.88812980358668 22.06091659550242 11.264446342157699 2 30.980358667805298 26.840876743524056 24.40193566752064 17.776828921150013 3 30.3535439795047 25.759180187873614 26.305721605465415 17.581554227156275 4 27.472815257614574 27.299743808710502 26.524907486478792 18.702533447196128 5 21.525192143467123 40.78508397381156 21.445488186734984 16.244235695986337 6 23.91460290350128 38.026188442926276 24.275547964702536 13.783660688869912 7 68.67919157415314 19.78992314261315 7.482493595217762 4.048391688015941 8 82.36606888699117 6.157699971534301 6.765157984628523 4.711073156846 9 77.5730145175064 7.256475946484486 8.642755479647025 6.527754056362084 10 42.3643609450612 25.150014232849415 16.917164816396244 15.56846000569314 11 35.053230856817535 24.897808141189866 22.474807856532877 17.57415314545972 12 30.527754056362085 23.792769712496444 27.042983205237686 18.636493025903786 13 22.99459151722175 29.88101337887845 29.612297181895812 17.512097922003985 14 19.41019072018218 32.19869057785368 28.038144036436098 20.35297466552804 15 17.70281810418446 25.88385994876174 38.77711357813835 17.636208368915458 16 19.524053515513806 24.83518360375747 34.45772843723313 21.18303444349559 17 19.8912610304583 23.59635639054939 28.232849416453178 28.27953316253914 18 21.381725021349276 26.2732707087959 30.818673498434386 21.526330771420437 19 23.6356390549388 28.478793054369483 25.969257045260463 21.916310845431255 20 25.576999715343014 27.292912040990608 27.421007685738687 19.709080557927695 21 22.386564190150867 29.414745231995443 27.661258183888414 20.537432393965272 22 21.91858810133789 26.597210361514374 26.162823797324226 25.321377739823514 23 20.251067463706235 30.079134642755477 26.782237403928267 22.88756048961002 24 21.841161400512384 24.84144605750071 30.69911756333618 22.618274978650728 25 18.327924850555082 28.66268146883006 29.176771989752346 23.83262169086251 26 18.41616851693709 31.731283803017362 27.53202391118702 22.320523768858525 27 19.78081411898662 31.759180187873614 27.791631084543127 20.66837460859664 28 16.259607173356105 28.946769143182465 33.301451750640474 21.49217193282095 29 18.491317961855962 27.243381725021347 32.02960432678622 22.235695986336466 30 20.277255906632508 29.788215200683176 28.53800170794193 21.396527184742386 31 23.24964417876459 29.583831483062912 24.686023341873042 22.48050099629946 32 23.10560774267008 30.086535724452034 25.484201537147737 21.323654995730145 33 21.87247366922858 29.30031312268716 24.97637346996869 23.85083973811557 34 20.743524053515515 28.405351551380587 27.42271562766866 23.42840876743524 35 19.521206945630514 27.725021349274126 27.190435525192143 25.563336179903217 36 22.319385140905208 29.760888129803586 25.816680899516083 22.10304582977512 37 20.51693709080558 29.808141189866213 28.37688585254768 21.29803586678053 38 18.891545687446627 29.973811557073727 24.96384856248221 26.170794192997437 39 20.63193851409052 26.802732707087962 28.120694563051522 24.444634215769998 40 22.196413321947052 25.40108169655565 26.916026188442927 25.486478793054367 41 18.798178195274694 26.610873896954168 26.04554511813265 28.545402789638487 42 20.56475946484486 26.749217193282092 27.017364076288075 25.66865926558497 43 21.808710503842867 27.093652149160263 25.91004839168802 25.187588955308854 44 19.573014517506405 28.922857956162822 27.439225732991744 24.06490179333903 45 20.245943637916312 29.010532308568177 25.3378878451466 25.405636208368914 46 21.932251636777682 29.134073441502988 25.36578423000285 23.56789069171648 47 19.567321377739823 27.27981781952747 28.648448619413607 24.5044121833191 48 20.314830629091947 25.323085681753486 28.890976373469968 25.4711073156846 49 20.170794192997437 23.96697978935383 30.252206091659552 25.61001992598918 50 19.0577853686308 26.107031027611725 29.40165101053231 25.43353259322516 51 18.727583262169087 26.89723882721321 25.482493595217765 28.89268431539994 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 203.0 1 277.0 2 351.0 3 436.5 4 522.0 5 447.0 6 372.0 7 355.5 8 339.0 9 353.5 10 368.0 11 428.5 12 489.0 13 484.5 14 480.0 15 467.0 16 454.0 17 464.0 18 474.0 19 545.0 20 616.0 21 611.0 22 606.0 23 662.5 24 719.0 25 810.0 26 1065.5 27 1230.0 28 1726.0 29 2222.0 30 2320.0 31 2418.0 32 2950.0 33 3482.0 34 4108.0 35 4734.0 36 5187.5 37 5641.0 38 6339.0 39 7037.0 40 8297.5 41 9558.0 42 11380.0 43 13202.0 44 14713.5 45 16225.0 46 17720.5 47 19216.0 48 18906.5 49 18597.0 50 17316.0 51 16035.0 52 13987.5 53 11940.0 54 10674.5 55 9409.0 56 8288.0 57 7167.0 58 6462.5 59 5758.0 60 5456.5 61 5155.0 62 4325.0 63 3495.0 64 2935.5 65 2376.0 66 1883.5 67 1391.0 68 1146.5 69 902.0 70 765.0 71 628.0 72 485.0 73 342.0 74 299.5 75 205.0 76 153.0 77 116.0 78 79.0 79 69.0 80 59.0 81 40.5 82 22.0 83 14.5 84 7.0 85 9.0 86 11.0 87 7.5 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 175650.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.30885283233704 #Duplication Level Percentage of deduplicated Percentage of total 1 76.03060258702283 32.927981781952745 2 8.829792827847301 7.6481639624252775 3 3.771427069092439 4.900085397096499 4 2.3412030707750553 4.055792769712497 5 1.5616784099274372 3.3817250213492747 6 1.088442528131244 2.828351836037575 7 0.7860973814281207 2.3831483062909196 8 0.6480702492375644 2.245374323939653 9 0.5087285729309076 1.9829205807002561 >10 4.376117362498685 35.03444349558782 >50 0.04206541171521716 1.2217477939083403 >100 0.015774529393206435 1.390264730999146 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCG 424 0.2413891261030458 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGC 419 0.2385425562197552 No Hit GAATCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTC 239 0.13606604042129233 No Hit GCTGTCTCTTATACACATCTGACGCAAATCGCCTCGTATGCCGTCTTCTGC 233 0.13265015656134357 TruSeq Adapter, Index 15 (95% over 21bp) GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 218 0.12411044691147168 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15997722744093368 0.0 2 0.0 0.0 0.0 0.802732707087959 0.0 3 0.0 0.0 0.0 1.0600626245374325 0.0 4 0.0 0.0 0.0 1.4198690577853685 0.0 5 0.0 0.0 0.0 2.546541417591802 0.0 6 0.0 0.0 0.0 3.13065755764304 0.0 7 0.0 0.0 0.0 3.7739823512667234 0.0 8 0.0 0.0 0.0 4.920011386279533 0.0 9 0.0 0.0 0.0 5.371477369769428 0.0 10 0.0 0.0 0.0 6.953031596925705 0.0 11 0.0 0.0 0.0 8.339311130088245 0.0 12 0.0 0.0 0.0 9.91175633361799 0.0 13 0.0 0.0 0.0 10.393965271847424 0.0 14 0.0 0.0 0.0 10.577853686307998 0.0 15 0.0 0.0 0.0 10.959863364645601 0.0 16 0.0 0.0 0.0 11.71762026757757 0.0 17 0.0 0.0 0.0 12.678052946199829 0.0 18 0.0 0.0 0.0 13.900370054084828 0.0 19 5.69313976658127E-4 0.0 0.0 14.494164531739255 0.0 20 5.69313976658127E-4 0.0 0.0 14.984343865641902 0.0 21 5.69313976658127E-4 0.0 0.0 15.643040136635355 5.69313976658127E-4 22 5.69313976658127E-4 0.0 0.0 16.300028465698833 5.69313976658127E-4 23 5.69313976658127E-4 0.0 0.0 17.007685738684884 5.69313976658127E-4 24 5.69313976658127E-4 0.0 0.0 17.539424992883575 5.69313976658127E-4 25 5.69313976658127E-4 0.0 0.0 17.990321662396813 5.69313976658127E-4 26 5.69313976658127E-4 0.0 0.0 18.414460575007116 5.69313976658127E-4 27 5.69313976658127E-4 0.0 0.0 18.846000569313976 5.69313976658127E-4 28 5.69313976658127E-4 0.0 0.0 19.289496157130657 5.69313976658127E-4 29 5.69313976658127E-4 0.0 0.0 19.705664674067748 5.69313976658127E-4 30 5.69313976658127E-4 0.0 0.0 20.229433532593227 5.69313976658127E-4 31 5.69313976658127E-4 0.0 0.0 20.742954739538856 5.69313976658127E-4 32 5.69313976658127E-4 0.0 0.0 21.21263877028181 5.69313976658127E-4 33 5.69313976658127E-4 0.0 0.0 21.67150583546826 5.69313976658127E-4 34 5.69313976658127E-4 0.0 0.0 22.13663535439795 5.69313976658127E-4 35 5.69313976658127E-4 0.0 0.0 22.62055223455736 5.69313976658127E-4 36 5.69313976658127E-4 0.0 0.0 23.049814972957588 5.69313976658127E-4 37 5.69313976658127E-4 0.0 0.0 23.530315969257046 5.69313976658127E-4 38 5.69313976658127E-4 0.0 0.0 23.976088812980358 5.69313976658127E-4 39 5.69313976658127E-4 0.0 0.0 24.41104469114717 5.69313976658127E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGCG 20 7.0169574E-4 45.000004 5 CTATGCG 20 7.0169574E-4 45.000004 1 CCCTAGA 20 7.0169574E-4 45.000004 23 CGCGCAG 20 7.0169574E-4 45.000004 35 AATGGTC 45 3.8016879E-10 45.000004 10 TCGATCA 20 7.0169574E-4 45.000004 17 ATACTCG 20 7.0169574E-4 45.000004 10 GTTACGG 20 7.0169574E-4 45.000004 2 CCGTACG 20 7.0169574E-4 45.000004 1 CGGGCTA 20 7.0169574E-4 45.000004 6 AGCTGTA 20 7.0169574E-4 45.000004 10 ACTCGCA 20 7.0169574E-4 45.000004 12 TCGTAGG 20 7.0169574E-4 45.000004 2 TACTCGC 20 7.0169574E-4 45.000004 11 GTTCTTC 50 2.1827873E-11 45.0 35 TAGAATC 50 2.1827873E-11 45.0 26 AAGACGC 25 3.8772778E-5 45.0 38 TACGGGA 35 1.20408E-7 45.0 4 CAAGACG 25 3.8772778E-5 45.0 37 CCACACG 25 3.8772778E-5 45.0 25 >>END_MODULE