##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936082.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 737930 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.822958817231985 31.0 31.0 34.0 30.0 34.0 2 31.934893553589095 33.0 31.0 34.0 30.0 34.0 3 31.59451845025951 33.0 31.0 34.0 30.0 34.0 4 35.48316100443132 37.0 35.0 37.0 33.0 37.0 5 30.97878931605979 37.0 35.0 37.0 0.0 37.0 6 33.297272098979576 37.0 35.0 37.0 17.0 37.0 7 29.740226037700054 35.0 32.0 37.0 0.0 37.0 8 32.75185451194558 35.0 35.0 37.0 17.0 37.0 9 36.5674711693521 39.0 35.0 39.0 32.0 39.0 10 36.850800211402166 38.0 37.0 39.0 33.0 39.0 11 36.97478893662 39.0 37.0 39.0 33.0 39.0 12 37.082927919992414 39.0 37.0 39.0 34.0 39.0 13 36.98547965254157 39.0 37.0 39.0 33.0 39.0 14 38.290809426368355 40.0 38.0 41.0 34.0 41.0 15 38.37385117829604 40.0 38.0 41.0 34.0 41.0 16 38.39080942636836 40.0 38.0 41.0 34.0 41.0 17 38.35418535633461 40.0 38.0 41.0 34.0 41.0 18 38.229117938015804 40.0 37.0 41.0 34.0 41.0 19 38.082818153483394 40.0 37.0 41.0 34.0 41.0 20 37.95220820403019 40.0 36.0 41.0 34.0 41.0 21 37.83345981326142 40.0 36.0 41.0 33.0 41.0 22 37.81523044191184 40.0 36.0 41.0 33.0 41.0 23 37.73858631577521 39.0 36.0 41.0 33.0 41.0 24 37.68737820660496 40.0 36.0 41.0 33.0 41.0 25 37.55361890694239 39.0 35.0 41.0 33.0 41.0 26 37.40756304798558 39.0 35.0 41.0 33.0 41.0 27 37.3631279389644 39.0 35.0 41.0 33.0 41.0 28 37.26050709416882 39.0 35.0 41.0 32.0 41.0 29 37.24419389372976 39.0 35.0 41.0 32.0 41.0 30 37.102104535660565 39.0 35.0 41.0 32.0 41.0 31 36.97453010448145 39.0 35.0 41.0 31.0 41.0 32 36.84049164554904 39.0 35.0 41.0 31.0 41.0 33 36.596224574146596 39.0 35.0 41.0 30.0 41.0 34 36.36701177618473 39.0 35.0 41.0 30.0 41.0 35 36.13851178296044 39.0 35.0 41.0 29.0 41.0 36 35.96660387841665 39.0 35.0 41.0 28.0 41.0 37 35.84060954291058 39.0 35.0 40.0 27.0 41.0 38 35.721531852614746 39.0 35.0 40.0 27.0 41.0 39 35.6984673343 39.0 35.0 40.0 26.0 41.0 40 35.54608296179855 39.0 35.0 40.0 25.0 41.0 41 35.45732522054937 39.0 35.0 40.0 25.0 41.0 42 35.42276367677151 39.0 35.0 40.0 25.0 41.0 43 35.27523477836651 38.0 35.0 40.0 24.0 41.0 44 35.125013212635345 38.0 34.0 40.0 24.0 41.0 45 34.990145406745896 38.0 34.0 40.0 23.0 41.0 46 34.888657460734755 38.0 34.0 40.0 23.0 41.0 47 34.754478067025325 38.0 34.0 40.0 23.0 41.0 48 34.68881872264307 38.0 34.0 40.0 23.0 41.0 49 34.54167332944859 38.0 34.0 40.0 23.0 41.0 50 34.36732481400675 38.0 33.0 40.0 22.0 41.0 51 32.53776103424444 36.0 31.0 39.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 16.0 9 38.0 10 35.0 11 31.0 12 24.0 13 21.0 14 27.0 15 34.0 16 78.0 17 167.0 18 296.0 19 581.0 20 1050.0 21 1593.0 22 2570.0 23 4087.0 24 6064.0 25 8755.0 26 11346.0 27 12275.0 28 12510.0 29 13512.0 30 15664.0 31 18944.0 32 24255.0 33 33181.0 34 47231.0 35 58611.0 36 70946.0 37 112794.0 38 142606.0 39 138577.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.81461656254658 20.9880340953749 24.58024473866085 14.617104603417669 2 35.01849768948274 23.79222961527516 24.76915154553955 16.420121149702545 3 31.984199043269683 23.114252029325275 28.913853617551798 15.987695309853239 4 26.57785968858835 25.233965281259742 29.130676351415445 19.057498678736465 5 20.68719255213909 39.65904625099942 24.00065046820159 15.6531107286599 6 24.548940956459283 34.606263466724485 27.303673790196903 13.541121786619328 7 68.7464935698508 18.53780168850704 9.271340100009485 3.444364641632675 8 83.07644356510781 4.491076389359424 9.579770438930522 2.8527096066022524 9 77.06340709823425 7.413440299215372 11.351754231431165 4.171398371119212 10 36.447088477226835 33.143116555770874 18.503110051088857 11.906684915913432 11 26.06751317875679 26.453999701868742 30.62837938557858 16.850107733795888 12 25.12514737170192 23.68219207783936 32.72085428157142 18.471806268887292 13 23.010854688114048 24.20256663911211 33.43393004756548 19.352648625208353 14 19.228111067445422 28.384535118507177 32.05859634382665 20.32875747022075 15 19.041372487905356 27.29987939235429 34.92174054449609 18.737007575244263 16 21.70978277072351 26.794275879826003 33.54572926971393 17.95021207973656 17 21.681189272695242 25.689021993956068 31.535375984171942 21.09441274917675 18 22.440068841218004 26.15586844280623 31.779437073977206 19.624625641998563 19 23.266298971447156 28.269890097976774 29.728971582670443 18.734839347905627 20 24.79693195831583 26.594392422045456 30.634884067594488 17.973791552044233 21 23.360345832260514 27.112598755979565 31.05009960294337 18.47695580881655 22 22.467171682950955 25.476671228978358 30.79939831691353 21.256758771157156 23 21.46070765519765 27.053379046793058 31.74054449609042 19.74536880191888 24 20.910790996435978 25.873456831948833 32.647134552057786 20.56861761955741 25 21.148076375808003 27.874595151301612 30.613066279999458 20.364262192890926 26 20.75034217337688 28.675484124510454 30.45126231485371 20.122911387258956 27 21.2081091702465 28.335072432344532 30.31249576518098 20.14432263222799 28 19.393844944642446 28.286964888268535 31.67834347431328 20.64084669277574 29 20.674589730733267 27.171547436748746 31.133034298646212 21.02082853387178 30 21.07788001571965 26.757687043486513 31.367338365427617 20.797094575366227 31 21.479950672828046 27.539604027482284 29.606060195411487 21.374385104278186 32 21.860474570758743 27.462767471169354 30.24446763243126 20.432290325640643 33 21.020150962828453 28.63930183079696 29.459027279010204 20.881519927364383 34 20.842491835268927 27.583781659507 30.295963031723876 21.277763473500197 35 20.746141232908272 27.79166045559877 29.920182131096446 21.542016180396516 36 20.603038228558265 29.26632607428889 28.857886249373248 21.2727494477796 37 20.830566584906425 29.730191210548423 29.05912484924044 20.3801173553047 38 20.79668803274023 28.682801891778354 29.076606182158198 21.443903893323217 39 21.648665862615697 27.557491903026033 28.642825200222244 22.15101703413603 40 22.313092027699106 27.3517813342729 30.299757429566487 20.035369208461507 41 19.750653856056807 28.487796945509736 29.45347119645495 22.308078001978508 42 20.84235632106026 28.575339124307185 28.27571720894936 22.306587345683194 43 21.189679237868088 27.87798300651823 28.823059097746402 22.109278657867275 44 21.50298808830106 27.89261854105403 28.281002263087284 22.323391107557626 45 20.894935834022196 27.726071578605016 28.722507554917133 22.656485032455652 46 21.220034420609004 28.615722358489286 27.905085848251186 22.259157372650524 47 20.625398072987952 28.303226593308306 29.23000826636673 21.84136706733701 48 20.835309582209693 27.47550580678384 29.68398086539374 22.00520374561273 49 20.685837410052443 27.30109902023227 29.2535877386744 22.759475831040884 50 19.549550770398277 27.574024636483134 30.08645806512813 22.78996652799046 51 19.841448375862207 26.978033146775438 28.75218516661472 24.428333310747632 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 333.0 1 702.5 2 1072.0 3 6863.0 4 12654.0 5 9971.0 6 7288.0 7 5758.0 8 4228.0 9 4018.0 10 3808.0 11 3721.0 12 3634.0 13 3533.0 14 3432.0 15 3352.0 16 3272.0 17 3063.5 18 2855.0 19 3041.0 20 3227.0 21 3550.5 22 3874.0 23 4303.5 24 4733.0 25 5562.5 26 7654.0 27 8916.0 28 10637.0 29 12358.0 30 14551.5 31 16745.0 32 18825.5 33 20906.0 34 23612.0 35 26318.0 36 28714.0 37 31110.0 38 32758.5 39 34407.0 40 37390.0 41 40373.0 42 43846.0 43 47319.0 44 49258.0 45 51197.0 46 54416.5 47 57636.0 48 58696.0 49 59756.0 50 57467.5 51 55179.0 52 49684.5 53 44190.0 54 40221.0 55 36252.0 56 32960.0 57 29668.0 58 28140.0 59 26612.0 60 25550.5 61 24489.0 62 21651.5 63 18814.0 64 15500.5 65 12187.0 66 10271.0 67 8355.0 68 6684.0 69 5013.0 70 4204.5 71 3396.0 72 2856.0 73 2316.0 74 1899.0 75 1236.0 76 990.0 77 770.5 78 551.0 79 409.5 80 268.0 81 203.0 82 138.0 83 103.0 84 68.0 85 56.0 86 44.0 87 37.5 88 31.0 89 24.5 90 18.0 91 18.5 92 19.0 93 11.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 737930.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.979708856237934 #Duplication Level Percentage of deduplicated Percentage of total 1 74.5048972389783 29.041792027392997 2 8.476990098338732 6.608612120209112 3 3.9533725973756275 4.6230393853779335 4 2.4369728542630207 3.799699693989108 5 1.6342315033197699 3.185093410154833 6 1.2708751303023857 2.972300554309227 7 0.9931195408803235 2.7098057394068986 8 0.7854444969123952 2.449311824990355 9 0.6307121636936361 2.212647886157924 >10 5.229826257966477 38.21848564262794 >50 0.06213296174165363 1.5189922022932496 >100 0.01963972654202822 1.2411666700621105 >500 7.141718742555518E-4 0.20363651881808173 >1k 7.141718742555518E-4 0.4238367736165817 >5k 3.570859371277759E-4 0.791579550593596 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5687 0.7706693046765953 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1901 0.25761251067174396 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1144 0.1550282547125066 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 750 0.10163565649858389 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.71028417329557E-4 0.0 0.0 0.05596736817855352 0.0 2 2.71028417329557E-4 0.0 0.0 0.2086918813437589 0.0 3 2.71028417329557E-4 0.0 0.0 0.33187429702004256 0.0 4 2.71028417329557E-4 0.0 0.0 0.4679305625194802 0.0 5 2.71028417329557E-4 0.0 0.0 0.907945198054016 0.0 6 2.71028417329557E-4 0.0 0.0 1.338609353190682 0.0 7 2.71028417329557E-4 0.0 0.0 1.6679088802460937 0.0 8 2.71028417329557E-4 0.0 0.0 2.2844985296708358 0.0 9 2.71028417329557E-4 0.0 0.0 2.5926578401745424 0.0 10 2.71028417329557E-4 0.0 0.0 3.1916306424728633 0.0 11 2.71028417329557E-4 0.0 0.0 3.822449283807407 0.0 12 2.71028417329557E-4 0.0 0.0 4.329949995257003 0.0 13 2.71028417329557E-4 0.0 0.0 4.615342918705026 0.0 14 2.71028417329557E-4 0.0 0.0 4.752754326291112 0.0 15 2.71028417329557E-4 0.0 0.0 4.9253994281300395 0.0 16 4.065426259943355E-4 0.0 0.0 5.317713062214573 0.0 17 4.065426259943355E-4 0.0 0.0 5.734148225441437 0.0 18 4.065426259943355E-4 0.0 0.0 6.3375929966256965 0.0 19 4.065426259943355E-4 0.0 0.0 6.6080793571205945 0.0 20 4.065426259943355E-4 0.0 0.0 6.933584486333392 0.0 21 4.065426259943355E-4 0.0 0.0 7.28036534630656 0.0 22 4.065426259943355E-4 0.0 0.0 7.671459352513111 0.0 23 4.065426259943355E-4 0.0 0.0 8.075969265377475 0.0 24 4.065426259943355E-4 0.0 0.0 8.389955686853767 0.0 25 4.065426259943355E-4 0.0 0.0 8.67304486875449 0.0 26 5.42056834659114E-4 0.0 0.0 8.943260200832057 0.0 27 5.42056834659114E-4 0.0 0.0 9.226755925358773 0.0 28 5.42056834659114E-4 0.0 0.0 9.518382502405377 0.0 29 5.42056834659114E-4 0.0 0.0 9.821527787188487 0.0 30 5.42056834659114E-4 0.0 0.0 10.177930155976854 0.0 31 5.42056834659114E-4 0.0 0.0 10.507365197240931 0.0 32 5.42056834659114E-4 0.0 0.0 10.833818925914382 0.0 33 5.42056834659114E-4 0.0 0.0 11.167319393438403 0.0 34 5.42056834659114E-4 0.0 0.0 11.479679644410716 0.0 35 5.42056834659114E-4 0.0 0.0 11.813180111934736 0.0 36 5.42056834659114E-4 0.0 0.0 12.148984321006058 0.0 37 5.42056834659114E-4 0.0 0.0 12.489531527380645 0.0 38 5.42056834659114E-4 0.0 0.0 12.837667529440461 0.0 39 5.42056834659114E-4 0.0 0.0 13.191901670890193 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGAC 20 7.031643E-4 45.0 28 TCTAGCG 20 7.031643E-4 45.0 1 CTACGAC 20 7.031643E-4 45.0 12 TACGACT 20 7.031643E-4 45.0 13 AGTTACG 25 3.889443E-5 45.0 1 GTATACG 35 1.2111377E-7 45.0 1 TATACGG 50 2.1827873E-11 45.0 2 CGTTATT 545 0.0 42.522938 1 CGTTTTT 2380 0.0 42.35294 1 CGGTTTT 705 0.0 41.808514 1 CGTTTTA 325 0.0 41.538464 1 CGAATAT 90 0.0 40.0 14 ACGAACG 40 3.4559707E-7 39.375 1 TTTCGAC 35 6.245249E-6 38.571426 24 GCGCCAA 35 6.245249E-6 38.571426 9 TCGACGT 35 6.245249E-6 38.571426 26 GATTACG 35 6.245249E-6 38.571426 1 TTCGACG 35 6.245249E-6 38.571426 25 CGGTAGT 130 0.0 38.07692 12 CGTATGG 95 0.0 37.894737 2 >>END_MODULE