##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936080.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 788592 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.848164830482684 31.0 31.0 34.0 30.0 34.0 2 31.958592022237102 33.0 31.0 34.0 30.0 34.0 3 31.57966730578043 33.0 31.0 34.0 30.0 34.0 4 35.48439370422221 37.0 35.0 37.0 33.0 37.0 5 31.01944224643415 37.0 35.0 37.0 0.0 37.0 6 33.328278755046966 37.0 35.0 37.0 17.0 37.0 7 29.67614051372573 35.0 32.0 37.0 0.0 37.0 8 32.720561456367804 35.0 35.0 37.0 17.0 37.0 9 36.59197912228377 39.0 35.0 39.0 32.0 39.0 10 36.902868657049524 38.0 37.0 39.0 34.0 39.0 11 37.033288443200036 39.0 37.0 39.0 34.0 39.0 12 37.11325121228722 39.0 37.0 39.0 34.0 39.0 13 36.99581405847384 39.0 37.0 39.0 33.0 39.0 14 38.26070895976627 40.0 38.0 41.0 33.0 41.0 15 38.354022105220444 40.0 38.0 41.0 34.0 41.0 16 38.38525752226754 40.0 38.0 41.0 34.0 41.0 17 38.349127305374644 40.0 38.0 41.0 34.0 41.0 18 38.21277289143182 40.0 37.0 41.0 34.0 41.0 19 38.06891649927973 40.0 37.0 41.0 34.0 41.0 20 37.92580193560168 40.0 36.0 41.0 34.0 41.0 21 37.80548876985818 40.0 36.0 41.0 33.0 41.0 22 37.78430417757218 40.0 36.0 41.0 33.0 41.0 23 37.70702086757157 39.0 36.0 41.0 33.0 41.0 24 37.657183943027576 39.0 35.0 41.0 33.0 41.0 25 37.53107437052367 39.0 35.0 41.0 33.0 41.0 26 37.39876133666078 39.0 35.0 41.0 33.0 41.0 27 37.36850487958285 39.0 35.0 41.0 33.0 41.0 28 37.272603577008134 39.0 35.0 41.0 32.0 41.0 29 37.24782396980948 39.0 35.0 41.0 32.0 41.0 30 37.08469018199525 39.0 35.0 41.0 32.0 41.0 31 36.93793622050439 39.0 35.0 41.0 31.0 41.0 32 36.779583105078416 39.0 35.0 41.0 31.0 41.0 33 36.52864091951224 39.0 35.0 41.0 30.0 41.0 34 36.25742969748615 39.0 35.0 41.0 30.0 41.0 35 36.03083977519427 39.0 35.0 41.0 28.0 41.0 36 35.82176714955262 39.0 35.0 41.0 27.0 41.0 37 35.6863143425244 39.0 35.0 40.0 26.0 41.0 38 35.5069757238217 39.0 35.0 40.0 25.0 41.0 39 35.454714224846306 39.0 35.0 40.0 25.0 41.0 40 35.32002607178364 39.0 35.0 40.0 24.0 41.0 41 35.19522769695863 38.0 34.0 40.0 24.0 41.0 42 35.12640123156208 38.0 34.0 40.0 24.0 41.0 43 34.990010043216266 38.0 34.0 40.0 23.0 41.0 44 34.82456580842818 38.0 34.0 40.0 23.0 41.0 45 34.668625854687846 38.0 34.0 40.0 23.0 41.0 46 34.56438310304949 38.0 34.0 40.0 22.0 41.0 47 34.38934708949622 38.0 33.0 40.0 22.0 41.0 48 34.31401409093676 38.0 33.0 40.0 21.0 41.0 49 34.197404995232006 38.0 33.0 40.0 20.0 41.0 50 34.03735645302007 37.0 33.0 40.0 20.0 41.0 51 32.2279734006939 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 11.0 9 30.0 10 43.0 11 28.0 12 13.0 13 15.0 14 21.0 15 47.0 16 87.0 17 185.0 18 344.0 19 652.0 20 1185.0 21 1852.0 22 2951.0 23 4671.0 24 7168.0 25 10316.0 26 13223.0 27 14126.0 28 14369.0 29 14936.0 30 17217.0 31 20782.0 32 25978.0 33 35439.0 34 50209.0 35 61807.0 36 75435.0 37 118913.0 38 151117.0 39 145409.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.119108487024974 19.660863919491955 24.297735711242314 14.922291882240755 2 35.82853998011646 22.884837786840343 24.958280073853146 16.32834215919005 3 32.3370006289691 23.725323107513137 28.221818126483655 15.715858137034106 4 26.480993974070245 25.724962971980442 29.639027532615092 18.155015521334224 5 20.92501572422748 38.996591393268005 24.762234463448777 15.316158419055734 6 24.30623186641508 33.89154340901252 28.197344127254652 13.60488059731775 7 67.7445370990322 18.88441678333029 9.920085418061559 3.450960699575953 8 82.43844725789762 4.3737445979670095 10.465234240266195 2.7225739038691743 9 77.07788057702842 6.732378720555116 12.22127538701889 3.9684653153975695 10 37.227108568182274 31.35436321951022 19.078306652869927 12.340221559437579 11 26.13721671028872 26.46463570515552 30.194321017712582 17.203826566843183 12 24.14873597500355 24.527385517479257 33.15174386755128 18.172134639965915 13 22.638195670257875 25.285065027289143 33.97599772759551 18.10074157485747 14 20.32800231298314 26.955130156024914 33.53635339947654 19.180514131515412 15 19.455941729056345 27.182624221397123 35.01671333211597 18.344720717430558 16 23.631738592326577 26.653072818390243 32.307834723152155 17.40735386613103 17 24.035369367175928 25.957022135654434 31.152230811370142 18.855377685799503 18 24.080893541907603 25.182477123785173 32.40890092722219 18.327728407085033 19 23.144667965183515 27.62214174122994 30.323919086168765 18.909271207417778 20 24.700732444660865 26.929134457361982 30.680503986852514 17.68962911112464 21 23.69045082881896 27.19758759916408 31.81683303913811 17.295128532878852 22 23.913506604175545 24.20326353805263 31.60785298354536 20.27537687422647 23 21.42502079655893 27.16347617018686 32.14995840688214 19.261544626372064 24 20.91791446020249 26.266941587031063 33.3460141619494 19.469129790817053 25 21.592914967435632 27.54580315296123 31.08058412968937 19.78069774991377 26 21.324715442205854 28.07801752997748 30.787022947227467 19.8102440805892 27 20.891538336681073 27.18541400369266 31.70270558159352 20.220342078032747 28 19.85855803761641 27.75871426542496 31.828245784892566 20.554481912066063 29 20.696507192565992 27.196953557733277 31.537601193012353 20.568938056688378 30 21.96446324588634 26.256543307565888 31.553705845354756 20.225287601193013 31 22.89751861545641 26.94802889199992 30.330766733621438 19.82368575892223 32 22.246358066021465 26.723070992350923 30.652732972183333 20.377837969444276 33 21.86567959096719 27.207985878629255 29.84737354677704 21.078960983626512 34 20.582506543307566 27.571038001907194 31.470900034491855 20.375555420293384 35 21.097982226550613 27.860921744070446 30.662370401931543 20.3787256274474 36 21.663293566254794 29.399993913202266 29.099838699860005 19.83687382068294 37 21.714270497291373 28.600594477245522 28.958954693935517 20.726180331527583 38 21.017078539980115 29.504103516140155 29.471006553452227 20.007811390427495 39 21.755483190293585 27.5800413902246 28.897579483433766 21.766895936048044 40 23.288722178262017 26.649648994663906 29.941845719966725 20.11978310710735 41 21.005412177653337 27.55404569156167 29.310720879745165 22.12982125103983 42 21.458751800677664 27.647122973603587 29.462129973420982 21.431995252297767 43 21.72073771988557 27.565585245602286 29.211937224826016 21.501739809686125 44 21.99565808428186 27.506365775965264 28.961998092803377 21.5359780469495 45 21.76955891005742 26.864842656278533 28.61454338872319 22.751055044940856 46 21.81064479477347 27.52094872887374 28.78129628502445 21.887110191328343 47 20.629425609187006 28.17084119544708 30.169973826769734 21.02975936859618 48 21.12435835007203 27.54871974354292 30.225896280966584 21.10102562541847 49 22.086706433745206 26.582567411284924 29.8504169456449 21.480309209324975 50 20.344106965325544 27.86941789924321 29.89594112037657 21.89053401505468 51 20.701199099153936 26.49823990098809 29.479629516911153 23.320931482946822 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 349.0 1 733.0 2 1117.0 3 7890.0 4 14663.0 5 11380.5 6 8098.0 7 6525.5 8 4953.0 9 4709.5 10 4466.0 11 4294.5 12 4123.0 13 3938.5 14 3754.0 15 3671.5 16 3589.0 17 3533.0 18 3477.0 19 3542.5 20 3608.0 21 3753.5 22 3899.0 23 4387.0 24 4875.0 25 6014.5 26 8552.5 27 9951.0 28 11084.0 29 12217.0 30 14754.0 31 17291.0 32 20542.0 33 23793.0 34 26332.5 35 28872.0 36 31432.0 37 33992.0 38 35747.5 39 37503.0 40 39927.0 41 42351.0 42 45701.5 43 49052.0 44 50328.0 45 51604.0 46 54572.5 47 57541.0 48 59278.0 49 61015.0 50 59460.0 51 57905.0 52 54366.5 53 50828.0 54 46341.0 55 41854.0 56 37551.0 57 33248.0 58 30880.5 59 28513.0 60 25665.5 61 22818.0 62 20618.5 63 18419.0 64 15871.5 65 13324.0 66 11331.0 67 9338.0 68 7952.5 69 6567.0 70 5718.0 71 4869.0 72 3931.0 73 2993.0 74 2504.0 75 1548.0 76 1081.0 77 891.5 78 702.0 79 546.0 80 390.0 81 293.5 82 197.0 83 155.5 84 114.0 85 84.0 86 54.0 87 41.5 88 29.0 89 22.0 90 15.0 91 10.5 92 6.0 93 3.0 94 0.0 95 2.0 96 4.0 97 2.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 788592.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.892178692573765 #Duplication Level Percentage of deduplicated Percentage of total 1 74.10790167379943 28.822177544290938 2 8.442005223112403 6.566559513218573 3 3.9858522019807747 4.650554282448747 4 2.5334688487027766 3.9412849270327004 5 1.7243311325764246 3.3531497266665204 6 1.3323323896244101 3.109038562510582 7 1.039690705556822 2.8305085693866814 8 0.7853724002784576 2.443587498547627 9 0.6912040370352421 2.4194187829262708 >10 5.290997062775732 38.19022504328771 >50 0.04822104110118649 1.18151529779037 >100 0.016960490290528697 0.9794865027037816 >500 6.651172662946844E-4 0.18857669628169546 >1k 6.651172662946844E-4 0.4551449891737218 >5k 3.325586331473422E-4 0.8687720637339839 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6717 0.851771258141092 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2137 0.2709893075253109 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1382 0.1752490514740195 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 865 0.10968916752896302 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2680828616065088E-4 0.0 0.0 0.04894799845801124 0.0 2 1.2680828616065088E-4 0.0 0.0 0.1657384300119707 0.0 3 1.2680828616065088E-4 0.0 0.0 0.26376123521415384 0.0 4 1.2680828616065088E-4 0.0 0.0 0.3750989104632053 0.0 5 1.2680828616065088E-4 0.0 0.0 0.6999817396067929 0.0 6 1.2680828616065088E-4 0.0 0.0 1.0629070545985757 0.0 7 1.2680828616065088E-4 0.0 0.0 1.3595116359283381 0.0 8 1.2680828616065088E-4 0.0 0.0 1.9227940430539494 0.0 9 1.2680828616065088E-4 0.0 0.0 2.2259926552640654 0.0 10 1.2680828616065088E-4 0.0 0.0 2.7646742548745107 0.0 11 1.2680828616065088E-4 0.0 0.0 3.2684835757907766 0.0 12 1.2680828616065088E-4 0.0 0.0 3.696207925010652 0.0 13 1.2680828616065088E-4 0.0 0.0 3.913810944062329 0.0 14 1.2680828616065088E-4 0.0 0.0 4.028445634751558 0.0 15 1.2680828616065088E-4 0.0 0.0 4.167934749528273 0.0 16 1.2680828616065088E-4 0.0 0.0 4.4283989693022505 0.0 17 1.2680828616065088E-4 0.0 0.0 4.747702233854769 0.0 18 1.2680828616065088E-4 0.0 0.0 5.106696491975572 0.0 19 1.2680828616065088E-4 0.0 0.0 5.335712256781707 0.0 20 1.2680828616065088E-4 0.0 0.0 5.56815184531418 0.0 21 1.2680828616065088E-4 0.0 0.0 5.850807515166271 0.0 22 1.2680828616065088E-4 0.0 0.0 6.161741432832187 0.0 23 1.2680828616065088E-4 0.0 0.0 6.476860023941405 0.0 24 1.2680828616065088E-4 0.0 0.0 6.726799155964048 0.0 25 1.2680828616065088E-4 0.0 0.0 6.957463428490271 0.0 26 1.2680828616065088E-4 0.0 0.0 7.187747276158014 0.0 27 1.2680828616065088E-4 0.0 0.0 7.42855621157709 0.0 28 1.2680828616065088E-4 0.0 0.0 7.679636618175178 0.0 29 1.2680828616065088E-4 0.0 0.0 7.944031894820135 0.0 30 1.2680828616065088E-4 0.0 0.0 8.261940268224887 0.0 31 2.5361657232130175E-4 0.0 0.0 8.534831700042607 0.0 32 2.5361657232130175E-4 0.0 0.0 8.822306084768803 0.0 33 3.8042485848195266E-4 0.0 0.0 9.100777081177592 0.0 34 3.8042485848195266E-4 0.0 0.0 9.38888550733459 0.0 35 3.8042485848195266E-4 0.0 0.0 9.691703694686225 0.0 36 3.8042485848195266E-4 0.0 0.0 9.977909996550814 0.0 37 3.8042485848195266E-4 0.0 0.0 10.266652464138616 0.0 38 3.8042485848195266E-4 0.0 0.0 10.592169334713008 0.0 39 3.8042485848195266E-4 0.0 0.0 11.018118367926634 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGACC 20 7.031939E-4 45.0 15 CGCATAG 45 3.8380676E-10 45.0 2 ACTTACG 25 3.8896884E-5 45.0 1 CGTTCGG 20 7.031939E-4 45.0 45 CGTTAGT 25 3.8896884E-5 45.0 38 TATTACG 20 7.031939E-4 45.0 1 CGGTCGT 30 2.164632E-6 44.999996 31 CGTTTTT 3140 0.0 42.0621 1 CGTTATT 670 0.0 41.641792 1 CGGTTTT 740 0.0 40.743244 1 CGTTTTA 420 0.0 40.714287 1 CGGTTTA 100 0.0 40.5 1 GCGCATA 45 1.9270374E-8 40.0 1 CGAATAT 90 0.0 40.0 14 TACGGGA 425 0.0 38.647057 4 CACGACG 35 6.245793E-6 38.57143 26 ACGGGCG 140 0.0 38.57143 5 GCGATCT 70 0.0 38.57143 9 CTACGAA 95 0.0 37.894737 11 ACGGGAG 435 0.0 37.75862 5 >>END_MODULE