##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936076.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 170437 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.613587425265642 31.0 31.0 34.0 30.0 34.0 2 31.74435715249623 31.0 31.0 34.0 30.0 34.0 3 31.69367566901553 31.0 31.0 34.0 30.0 34.0 4 35.474544846482864 37.0 35.0 37.0 33.0 37.0 5 30.914865903530337 35.0 35.0 37.0 0.0 37.0 6 33.14090250356437 36.0 35.0 37.0 17.0 37.0 7 29.651167293486743 35.0 32.0 37.0 0.0 37.0 8 32.53440274118883 35.0 33.0 37.0 17.0 37.0 9 36.23812317747907 39.0 35.0 39.0 32.0 39.0 10 36.59799221999918 38.0 35.0 39.0 32.0 39.0 11 36.67028286111584 38.0 35.0 39.0 33.0 39.0 12 36.51353285964902 38.0 35.0 39.0 33.0 39.0 13 35.99107588141073 38.0 35.0 39.0 31.0 39.0 14 37.13874334798195 39.0 35.0 40.0 32.0 41.0 15 37.303549111988595 39.0 35.0 41.0 32.0 41.0 16 37.484337321121586 39.0 35.0 41.0 33.0 41.0 17 37.44153558206258 39.0 35.0 41.0 33.0 41.0 18 37.32362691199681 39.0 36.0 40.0 32.0 41.0 19 37.21250667402031 39.0 35.0 40.0 32.0 41.0 20 37.191220216267595 39.0 35.0 40.0 32.0 41.0 21 37.095366616403716 39.0 35.0 40.0 32.0 41.0 22 37.11858340618528 39.0 35.0 40.0 32.0 41.0 23 37.10473078028832 39.0 35.0 40.0 32.0 41.0 24 36.999178582115384 39.0 35.0 40.0 32.0 41.0 25 36.93040830336136 39.0 35.0 40.0 32.0 41.0 26 36.67479479221061 38.0 35.0 40.0 31.0 41.0 27 36.64349877080681 38.0 35.0 40.0 31.0 41.0 28 36.572569336470366 38.0 35.0 40.0 31.0 41.0 29 36.54525132453634 38.0 35.0 40.0 31.0 41.0 30 36.46519241713947 38.0 35.0 40.0 31.0 41.0 31 36.33467498254487 38.0 35.0 40.0 30.0 41.0 32 36.207231997746966 38.0 35.0 40.0 30.0 41.0 33 36.05074015618674 38.0 35.0 40.0 30.0 41.0 34 35.90200484636552 38.0 35.0 40.0 30.0 41.0 35 35.827889484090896 38.0 35.0 40.0 29.0 41.0 36 35.590000997436 38.0 35.0 40.0 28.0 41.0 37 35.57895292688794 38.0 34.0 40.0 28.0 41.0 38 35.4643005920076 38.0 34.0 40.0 27.0 41.0 39 35.48808063976718 38.0 34.0 40.0 28.0 41.0 40 35.30769140503529 38.0 34.0 40.0 27.0 41.0 41 35.18727154315084 38.0 34.0 40.0 26.0 41.0 42 35.16575039457395 38.0 34.0 40.0 26.0 41.0 43 34.959914807230824 38.0 34.0 40.0 26.0 41.0 44 34.75121012456216 37.0 34.0 40.0 24.0 41.0 45 34.64822779091394 37.0 34.0 40.0 24.0 41.0 46 34.4752606534966 37.0 33.0 40.0 23.0 41.0 47 34.270592653003746 37.0 33.0 40.0 23.0 41.0 48 34.172967137417345 37.0 33.0 40.0 23.0 41.0 49 33.971848835640145 37.0 33.0 40.0 22.0 41.0 50 33.73106191730669 36.0 33.0 40.0 22.0 41.0 51 31.2822919905889 35.0 28.0 38.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 7.0 11 8.0 12 2.0 13 3.0 14 7.0 15 11.0 16 20.0 17 48.0 18 105.0 19 162.0 20 290.0 21 422.0 22 679.0 23 1049.0 24 1314.0 25 1699.0 26 2065.0 27 2560.0 28 3009.0 29 3721.0 30 4651.0 31 5896.0 32 7763.0 33 11131.0 34 15645.0 35 17900.0 36 16930.0 37 23520.0 38 27399.0 39 22414.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.696128188128164 20.301929745301784 26.101726737738872 10.90021532883118 2 29.32637866191027 29.402066452706865 24.400218262466485 16.871336622916385 3 27.92527444158252 29.284721040619115 25.72094087551412 17.069063642284245 4 25.933922798453384 25.326660290899277 30.654141999683166 18.08527491096417 5 22.65059816823812 39.358824668352526 21.338676461097062 16.651900702312293 6 24.97227714639427 36.95500390173495 24.62728163485628 13.445437317014497 7 65.59021808644836 19.0698029183804 10.5235365560295 4.816442439141736 8 76.53326449069158 7.953085304247318 9.889871330755645 5.623778874305462 9 70.9411688776498 7.865662972241942 10.91018968885864 10.282978461249611 10 42.764188527139055 26.409171717408782 17.131843437751193 13.69479631770097 11 31.96489025270334 23.777114124280526 26.794651396117043 17.46334422689909 12 31.3828570087481 20.733174134724266 30.17243908306295 17.711529773464683 13 21.36683935999812 29.16972253677312 32.744650516026454 16.71878758720231 14 17.189342689674188 34.09353602797515 28.530190040894876 20.186931241455788 15 14.393588246683525 26.0037433186456 42.611052764364544 16.99161567030633 16 16.1115250796482 26.393330086776935 35.041686957644174 22.453457875930695 17 16.98340149146019 24.373815544746737 30.493965512183387 28.148817451609688 18 18.548789288710786 25.98086096328849 32.87373046932298 22.59661927867775 19 21.94300533334898 28.17404671520855 28.294912489658934 21.588035461783534 20 23.471429325791934 29.326965388970706 29.198472162734618 18.003133122502742 21 20.86284081508123 29.54992167193743 29.9870333319643 19.600204181017034 22 18.284762111513345 25.367731185129987 28.718529427295714 27.62897727606095 23 17.123629258905048 30.331442116441853 29.31405739364105 23.230871231012046 24 20.371163538433557 24.092773282796575 31.098294384435306 24.437768794334563 25 17.362427172503622 30.56319930531516 28.742585236773703 23.331788285407512 26 16.6384059799222 30.796716675369783 29.538187130728655 23.026690213979357 27 19.39778334516566 31.057223490204596 27.18658507249013 22.358408092139616 28 14.768506838303889 28.57067420806515 33.9110639121787 22.749755041452264 29 17.55311346714622 28.15409799515363 31.41688717825355 22.875901359446598 30 17.654617248602122 28.29315230847762 28.95615388677341 25.096076556146844 31 21.464236052030955 30.80258394597417 24.14733889941738 23.585841102577493 32 23.688518338154275 29.125718007240213 25.8523677370524 21.333395917553112 33 19.345564636786612 27.319772115209723 26.094099285953163 27.240563962050494 34 18.158029066458575 28.799497761636268 28.063742027846068 24.978731144059097 35 19.68175924241802 25.552550209168196 27.17719743952311 27.588493108890678 36 21.130388354641305 27.631324184302702 27.623696732517 23.614590728538992 37 18.741235764534697 26.70546888293035 31.348826839242655 23.2044685132923 38 17.907496611651226 29.047683308201854 26.523583494194337 26.52123658595258 39 19.866578266456226 24.12739017936246 31.206252163556037 24.799779390625275 40 23.23497832043512 22.874141178265283 29.004265505729386 24.886614995570213 41 17.544899288300076 25.20638124350933 28.56715384570252 28.681565622488076 42 21.51469457922869 23.990096047219794 31.2602310531164 23.23497832043512 43 21.489465315629822 24.163180530049228 29.430816078668364 24.916538075652586 44 19.100899452583654 26.52417022125477 29.412040812734325 24.96288951342725 45 18.784653567007165 25.486250051338615 27.595533833615942 28.133562548038277 46 22.839524281699397 27.259339227984537 26.57932256493602 23.321813925380052 47 16.9775342208558 24.76457576699895 33.769662690612954 24.488227321532296 48 20.726133409999004 23.09651073417157 29.774051409025038 26.403304446804395 49 19.063348920715573 21.140362714668765 34.27014087316721 25.52614749144845 50 18.561110556979997 22.645904351754606 31.896243186632013 26.89674190463338 51 17.944460416458867 23.741323773593763 27.404847538973343 30.909368270974024 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 505.0 1 519.5 2 534.0 3 620.0 4 706.0 5 579.5 6 453.0 7 432.5 8 412.0 9 438.5 10 465.0 11 483.5 12 502.0 13 560.5 14 619.0 15 563.5 16 508.0 17 520.5 18 533.0 19 539.0 20 545.0 21 611.0 22 677.0 23 785.0 24 893.0 25 1076.5 26 1436.0 27 1612.0 28 1930.5 29 2249.0 30 2619.0 31 2989.0 32 3115.0 33 3241.0 34 3623.5 35 4006.0 36 4991.0 37 5976.0 38 6420.5 39 6865.0 40 7710.0 41 8555.0 42 10146.0 43 11737.0 44 14564.5 45 17392.0 46 20718.0 47 24044.0 48 21040.5 49 18037.0 50 16870.0 51 15703.0 52 13235.0 53 10767.0 54 8910.5 55 7054.0 56 6001.0 57 4948.0 58 4516.5 59 4085.0 60 3894.0 61 3703.0 62 3494.5 63 3286.0 64 2767.5 65 2249.0 66 1777.0 67 1305.0 68 1005.0 69 705.0 70 569.5 71 434.0 72 355.0 73 276.0 74 262.0 75 188.5 76 129.0 77 100.0 78 71.0 79 67.0 80 63.0 81 59.0 82 55.0 83 37.5 84 20.0 85 14.0 86 8.0 87 5.5 88 3.0 89 5.5 90 8.0 91 4.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 170437.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.281312156397966 #Duplication Level Percentage of deduplicated Percentage of total 1 75.01491750274066 31.71729143319819 2 10.241039090795553 8.660091412076017 3 4.168574719342797 5.287584268674055 4 2.3104783314599726 3.9076022225221054 5 1.473710503309604 3.1155206909297863 6 1.0060641383234115 2.552262712908582 7 0.7410182756754506 2.193185751920064 8 0.5703342908288581 1.9291585747226245 9 0.44266822086230107 1.6844933905196642 >10 3.9382207235335747 31.101228019737498 >50 0.05689466161553086 1.5213832677176904 >100 0.03052884281808973 3.0767967049408287 >500 0.001387674673549533 0.40836203406537314 >1k 0.0041630240206485996 2.8450395160675206 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCG 1909 1.1200619583775824 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGC 1582 0.9282022096141096 No Hit GAATCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC 1358 0.7967753480758286 No Hit GCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 696 0.40836203406537314 No Hit GAATGACTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCT 415 0.24349173008208314 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCG 370 0.21708901236233916 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 352 0.20652792527444158 No Hit TGCATGGGAGGGAAAATCTGTTTCTTGTTCTGTTACAACTTTCTGAATGTT 312 0.1830588428568914 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTC 294 0.17249775576899382 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCG 292 0.17132430164811632 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGC 291 0.17073757458767755 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGC 254 0.14902867335144365 No Hit GAATATGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC 248 0.14550831098881112 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 230 0.13494722390091354 No Hit CTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGCT 228 0.13377376978003602 Illumina Single End Adapter 1 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCT 226 0.13260031565915853 No Hit GAATCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTT 222 0.1302534074174035 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 220 0.129079953296526 No Hit GAATCTATCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC 197 0.11558523090643463 No Hit CCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 190 0.11147814148336337 No Hit TCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 181 0.10619759793941456 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2229562829667267 0.0 2 0.0 0.0 0.0 1.2861057164817498 0.0 3 0.0 0.0 0.0 1.6592641269207977 0.0 4 0.0 0.0 0.0 2.279434629804561 0.0 5 0.0 0.0 0.0 4.576471071422285 0.0 6 0.0 0.0 0.0 5.413730586668388 0.0 7 0.0 0.0 0.0 6.637056507683191 0.0 8 0.0 0.0 0.0 8.414252773752178 0.0 9 0.0 0.0 0.0 9.094269436800694 0.0 10 0.0 0.0 0.0 12.056654364955966 0.0 11 0.0 0.0 0.0 13.870814435832594 0.0 12 0.0 0.0 0.0 16.505218937202603 0.0 13 0.0 0.0 0.0 17.16117979077313 0.0 14 0.0 0.0 0.0 17.46275749983865 0.0 15 0.0 0.0 0.0 17.997265851898355 0.0 16 0.0 0.0 0.0 18.963018593380546 0.0 17 0.0 0.0 0.0 20.104202725933924 0.0 18 0.0 0.0 0.0 21.572780558212127 0.0 19 0.0 0.0 0.0 22.32437792263417 0.0 20 0.0 0.0 0.0 23.004394585682686 0.0 21 0.0 0.0 0.0 23.786501757247546 0.0 22 0.0 0.0 0.0 24.62786836191672 0.0 23 0.0 0.0 0.0 25.488010232519933 0.0 24 0.0 0.0 0.0 26.136343634304758 0.0 25 0.0 0.0 0.0 26.64914308512823 0.0 26 0.0 0.0 0.0 27.12439200408362 0.0 27 0.0 0.0 0.0 27.601987831280766 0.0 28 0.0 0.0 0.0 28.08134383965923 0.0 29 0.0 0.0 0.0 28.64636199886175 0.0 30 0.0 0.0 0.0 29.28648122180043 0.0 31 0.0 0.0 0.0 29.900197727019368 0.0 32 0.0 0.0 0.0 30.409476815480208 0.0 33 0.0 0.0 0.0 30.90760808979271 0.0 34 0.0 0.0 0.0 31.480253700780935 0.0 35 0.0 0.0 0.0 32.0640471259175 0.0 36 0.0 0.0 0.0 32.614983835669484 0.0 37 0.0 0.0 0.0 33.13541073827866 0.0 38 0.0 0.0 0.0 33.63060837728897 0.0 39 0.0 0.0 0.0 34.18447872234315 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTAA 20 7.016364E-4 45.000004 26 TAATACG 50 2.1827873E-11 45.000004 4 ATCTATG 20 7.016364E-4 45.000004 30 TACCAGA 20 7.016364E-4 45.000004 11 CAACGGG 25 3.8767852E-5 45.000004 3 GATCCAT 20 7.016364E-4 45.000004 9 ATAGAGT 20 7.016364E-4 45.000004 14 AAGCGAA 20 7.016364E-4 45.000004 1 TATGATG 20 7.016364E-4 45.000004 33 ACCTCGC 20 7.016364E-4 45.000004 29 CCCAATC 25 3.8767852E-5 45.000004 29 TGCGCGG 40 6.7557266E-9 45.000004 2 TCATGTG 20 7.016364E-4 45.000004 12 GGAACTA 20 7.016364E-4 45.000004 8 TATTAGG 20 7.016364E-4 45.000004 2 GGAGTTA 20 7.016364E-4 45.000004 31 TGTTACG 20 7.016364E-4 45.000004 1 AGCGAAG 25 3.8767852E-5 45.000004 2 GGACGCT 20 7.016364E-4 45.000004 8 CATGTGT 20 7.016364E-4 45.000004 13 >>END_MODULE