SRR2936075.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936075.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	265897
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCG	2785	1.0473980526294016	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGC	2084	0.7837621334576923	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTC	1940	0.7296058248118633	No Hit
GCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC	673	0.2531055258239092	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCG	615	0.2312925681748948	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCT	562	0.21136003790941604	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTC	426	0.1602124130772442	No Hit
GAATATGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTC	420	0.15795590021700132	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGC	359	0.1350146861378654	No Hit
GAACTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCT	346	0.1301255749406725	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCG	333	0.1252364637434796	No Hit
TTCTAAGGTTTGATTTTTCTTTCATTTTGTTTTGTTTTGATTTTGCTATCT	303	0.11395389944226524	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTT	300	0.1128256430121438	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	277	0.10417567704787944	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGC	272	0.1022952496643437	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAG	35	1.2072269E-7	45.000004	6
ACGCATC	25	3.8826904E-5	45.000004	33
TAGGTAG	25	3.8826904E-5	45.000004	1
CGCGCGG	30	2.159186E-6	45.000004	2
GCGCATG	30	2.159186E-6	45.000004	18
GGCCACC	45	3.8198777E-10	45.000004	8
GCCGATT	25	3.8826904E-5	45.000004	9
TGCGCAC	30	2.159186E-6	45.000004	23
GCGATGC	25	3.8826904E-5	45.000004	9
AAGGCGA	35	1.2072269E-7	45.000004	6
ATTTGCG	25	3.8826904E-5	45.000004	1
TACGTAG	25	3.8826904E-5	45.000004	1
ATCCTTA	20	7.0234964E-4	45.0	24
AGCCGTG	20	7.0234964E-4	45.0	31
ATCTCGC	20	7.0234964E-4	45.0	1
ACGCCGA	20	7.0234964E-4	45.0	42
TTCAGCG	20	7.0234964E-4	45.0	1
GCGGTGT	20	7.0234964E-4	45.0	9
GCGCGAG	20	7.0234964E-4	45.0	1
CGGTTCG	20	7.0234964E-4	45.0	29