##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936073.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 962050 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.83918091575282 31.0 31.0 34.0 30.0 34.0 2 31.98595914973234 33.0 31.0 34.0 30.0 34.0 3 31.940003118341043 33.0 31.0 34.0 30.0 34.0 4 35.67603762798191 37.0 35.0 37.0 33.0 37.0 5 31.140276492905773 37.0 35.0 37.0 0.0 37.0 6 33.36753391195884 37.0 35.0 37.0 17.0 37.0 7 29.55140585208669 35.0 32.0 37.0 0.0 37.0 8 32.58257678914817 35.0 33.0 37.0 17.0 37.0 9 36.394472220778546 39.0 35.0 39.0 32.0 39.0 10 36.749404916584375 38.0 35.0 39.0 33.0 39.0 11 36.891575281950004 39.0 37.0 39.0 33.0 39.0 12 36.93118860766072 39.0 37.0 39.0 33.0 39.0 13 36.75738371186529 39.0 35.0 39.0 33.0 39.0 14 37.97301283717063 40.0 37.0 41.0 33.0 41.0 15 38.075747622264956 40.0 37.0 41.0 33.0 41.0 16 38.10973753962892 40.0 37.0 41.0 33.0 41.0 17 38.09529026557871 40.0 37.0 41.0 33.0 41.0 18 37.99627046411309 40.0 37.0 41.0 33.0 41.0 19 37.94028376903487 40.0 37.0 41.0 33.0 41.0 20 37.879113351696894 40.0 37.0 41.0 33.0 41.0 21 37.75804791850735 40.0 36.0 41.0 33.0 41.0 22 37.75085286627514 40.0 36.0 41.0 33.0 41.0 23 37.68286887375916 39.0 36.0 41.0 33.0 41.0 24 37.60792162569513 39.0 36.0 41.0 33.0 41.0 25 37.476110389272904 39.0 36.0 41.0 32.0 41.0 26 37.323134972194794 39.0 36.0 41.0 32.0 41.0 27 37.27644820955252 39.0 36.0 41.0 32.0 41.0 28 37.138645600540514 39.0 35.0 41.0 31.0 41.0 29 37.09522685931085 39.0 35.0 41.0 31.0 41.0 30 36.98682189075412 39.0 35.0 41.0 31.0 41.0 31 36.850525440465674 39.0 35.0 41.0 31.0 41.0 32 36.75677147757393 39.0 35.0 41.0 30.0 41.0 33 36.61259497947092 39.0 35.0 40.0 30.0 41.0 34 36.432571072189596 39.0 35.0 40.0 30.0 41.0 35 36.335948235538694 39.0 35.0 40.0 30.0 41.0 36 36.1938974065797 39.0 35.0 40.0 29.0 41.0 37 36.08522114235227 39.0 35.0 40.0 29.0 41.0 38 35.942410477625906 38.0 35.0 40.0 29.0 41.0 39 35.87588067148277 38.0 35.0 40.0 28.0 41.0 40 35.72081596590614 38.0 35.0 40.0 27.0 41.0 41 35.59429551478613 38.0 35.0 40.0 27.0 41.0 42 35.52106439374253 38.0 34.0 40.0 27.0 41.0 43 35.375397328621176 38.0 34.0 40.0 26.0 41.0 44 35.19144639052024 38.0 34.0 40.0 25.0 41.0 45 35.06453406787589 38.0 34.0 40.0 25.0 41.0 46 34.9068717842108 38.0 34.0 40.0 24.0 41.0 47 34.768557767267815 38.0 34.0 40.0 24.0 41.0 48 34.67346083883374 38.0 34.0 40.0 23.0 41.0 49 34.519451171976506 37.0 33.0 40.0 23.0 41.0 50 34.32732914089704 37.0 33.0 40.0 23.0 41.0 51 32.16592588742789 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 24.0 9 61.0 10 71.0 11 49.0 12 44.0 13 33.0 14 45.0 15 78.0 16 134.0 17 256.0 18 447.0 19 801.0 20 1364.0 21 2274.0 22 3366.0 23 4877.0 24 6513.0 25 8649.0 26 10883.0 27 12913.0 28 15218.0 29 18044.0 30 22141.0 31 28072.0 32 35750.0 33 48789.0 34 68153.0 35 82450.0 36 99846.0 37 150350.0 38 178096.0 39 162242.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.73338184086066 19.9856556312042 23.586611922457255 10.694350605477885 2 32.01507198170573 23.14079309807183 24.641338807754277 20.202796112468167 3 31.688165895743463 23.939088404968555 27.732446338547895 16.640299360740084 4 27.84709734421288 24.863572579387768 25.22602775323528 22.063302323164077 5 20.879060339899176 40.90203211891274 20.780624707655527 17.43828283353256 6 25.15492957746479 35.85967465308456 24.83789823813731 14.147497531313341 7 67.05555844290836 19.731510836235124 7.0241671430798815 6.188763577776623 8 79.82963463437451 5.419676731978587 10.007068239696482 4.743620393950419 9 73.39369055662388 7.5855724754430645 12.479392962943713 6.541344004989345 10 41.791798763058054 25.609167922665144 18.29260433449405 14.306428979782757 11 29.387453874538743 28.350085754378675 23.711449508861286 18.551010862221297 12 26.11319577984512 23.616236162361623 28.460682916688324 21.80988514110493 13 24.41297229873707 24.30954732082532 29.446182630840394 21.831297749597216 14 21.269060859622684 26.492593940023905 29.103788784366717 23.134556415986694 15 20.862117353567903 25.29255236214334 33.5730991112728 20.272231173015957 16 24.80110181383504 25.096824489371656 30.357153994075155 19.744919702718153 17 23.196507458032325 24.40070682396965 27.541395977340056 24.86138974065797 18 23.384647367600436 26.994335013772673 29.52185437347331 20.09916324515358 19 23.561353360012475 27.336105192037834 27.896782911491087 21.205758536458603 20 25.33766436255912 27.06408190842472 28.028896626994438 19.569357102021726 21 24.556831765500753 28.780936541759782 27.51281118444987 19.14942050828959 22 25.342133984720128 25.149940231796684 26.937581206797983 22.5703445766852 23 22.934462865755417 27.743880255703967 27.37529234447274 21.946364534067875 24 22.638324411413127 27.227067200249465 28.629489111792527 21.505119276544878 25 22.18637284964399 27.98191362195312 26.91346603606881 22.91824749233408 26 21.245153578296346 26.863572579387768 28.380125773088714 23.511148069227172 27 21.701470817525077 25.91206278259966 29.813835039758846 22.572631360116418 28 21.020944857335895 25.87900836754846 29.181539421028013 23.918507354087627 29 21.189543163037264 26.139285899901253 28.500701626734575 24.170469310326904 30 21.248687698144586 26.563172392287303 29.255651993139647 22.93248791642846 31 23.194012785198275 25.373837118652876 26.635829738579076 24.796320357569773 32 22.792058624811602 26.350813367288602 27.6470037939816 23.210124213918196 33 21.916740294163507 24.631879839925162 28.465880151759265 24.98549971415207 34 20.51660516605166 25.066576581258772 29.571539940751517 24.84527831193805 35 21.706875941998856 24.708487084870846 30.090847669040073 23.493789304090225 36 21.39057221558131 25.48692895379658 29.073229042149578 24.049269788472532 37 20.661088301023856 27.132789356062574 28.184917623824123 24.021204719089447 38 20.86066212774804 27.28278156020997 28.083363650537912 23.77319266150408 39 21.546905046515256 24.980406423782547 28.341666233563746 25.131022296138454 40 21.901252533652098 23.32768567122291 31.070734369315524 23.70032742580947 41 19.988254248739672 24.695286107790658 29.092874590717738 26.223585052751936 42 20.83374045008056 23.52559638272439 29.086949742736863 26.553713424458188 43 21.423418741229668 23.91434956603087 29.169897614469104 25.49233407827036 44 21.3265422795073 24.946000727612912 28.550699028117045 25.176757964762746 45 21.4600072761291 24.054467023543474 28.4589158567642 26.026609843563225 46 21.19099838885713 25.307936177953327 28.754638532300813 24.746426900888725 47 20.629489111792527 23.885141104932174 30.802453094953485 24.682916688321814 48 19.84616184190011 23.939504183774233 30.572007691907903 25.642326282417756 49 20.68790603398992 23.78566602567434 30.236578140429295 25.28984979990645 50 19.237149836287095 24.168702250402784 31.387661763941583 25.206486149368533 51 19.762694246660775 24.053011797723613 28.96377527155553 27.22051868406008 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 306.0 1 783.5 2 1261.0 3 2337.0 4 3413.0 5 2728.5 6 2044.0 7 1788.0 8 1532.0 9 1459.0 10 1386.0 11 1490.5 12 1595.0 13 1564.0 14 1533.0 15 1677.0 16 1821.0 17 1833.5 18 1846.0 19 2056.5 20 2267.0 21 2663.0 22 3059.0 23 3608.5 24 4158.0 25 5432.0 26 7568.0 27 8430.0 28 10505.0 29 12580.0 30 16773.5 31 20967.0 32 21292.5 33 21618.0 34 25358.5 35 29099.0 36 31209.0 37 33319.0 38 37795.0 39 42271.0 40 45606.0 41 48941.0 42 53120.0 43 57299.0 44 62684.5 45 68070.0 46 76699.0 47 85328.0 48 85944.0 49 86560.0 50 83248.0 51 79936.0 52 71380.0 53 62824.0 54 57465.0 55 52106.0 56 48170.0 57 44234.0 58 41478.0 59 38722.0 60 37313.5 61 35905.0 62 33721.0 63 31537.0 64 28103.5 65 24670.0 66 20831.5 67 16993.0 68 14162.0 69 11331.0 70 8925.0 71 6519.0 72 5219.5 73 3920.0 74 3207.0 75 1927.5 76 1361.0 77 1101.0 78 841.0 79 718.5 80 596.0 81 430.5 82 265.0 83 207.0 84 149.0 85 130.0 86 111.0 87 86.5 88 62.0 89 49.0 90 36.0 91 26.0 92 16.0 93 14.0 94 12.0 95 6.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 962050.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.79445957513727 #Duplication Level Percentage of deduplicated Percentage of total 1 74.29528678659416 25.850643527193807 2 8.79311775875092 6.1190356079256105 3 3.722563764364696 3.8857378324517464 4 2.3035027557819854 3.205965340690944 5 1.5730503118093986 2.736671774195459 6 1.2263568440539374 2.5602254181076582 7 0.9626461590788017 2.344632700705997 8 0.7530682097056078 2.0962081103938215 9 0.6123506289203123 1.917576828339992 >10 5.5614321113235325 42.02334560068813 >50 0.16441118029323581 3.4743360391713565 >100 0.027351075840718355 1.5789194731843925 >500 0.0030390084266862212 0.8406382140141402 >1k 0.001823405056011733 1.3660635329369406 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 4620 0.4802245205550647 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 2812 0.29229250038979265 No Hit GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCCTC 1807 0.18782807546385324 No Hit GCTCAACTTGACCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATG 1401 0.1456265266878021 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1275 0.13252949430902758 No Hit GCTGTCTCTTATACACATCTGACGCCTCTTCTCTCGTATGCCGTCTTCTGC 1004 0.10436048022452056 RNA PCR Primer, Index 35 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1120523881295151 0.0 2 0.0 0.0 0.0 0.5392651109609687 0.0 3 0.0 0.0 0.0 0.7397744399979211 0.0 4 0.0 0.0 0.0 0.9947507925783483 0.0 5 0.0 0.0 0.0 1.8828543215009614 0.0 6 0.0 0.0 0.0 2.449248999532249 0.0 7 0.0 0.0 0.0 2.9943350137726727 0.0 8 0.0 0.0 0.0 4.030247908112884 0.0 9 0.0 0.0 0.0 4.4318902343953015 0.0 10 0.0 0.0 0.0 5.371342445818825 0.0 11 0.0 0.0 0.0 6.307884205602619 0.0 12 0.0 0.0 0.0 7.155865079777558 0.0 13 0.0 0.0 0.0 7.681929213658334 0.0 14 0.0 0.0 0.0 7.822774284080869 0.0 15 0.0 0.0 0.0 8.22057065641079 0.0 16 0.0 0.0 0.0 8.745803232680213 0.0 17 0.0 0.0 0.0 9.356894132321605 0.0 18 0.0 0.0 0.0 10.02525856244478 0.0 19 0.0 0.0 0.0 10.425549607608753 0.0 20 0.0 0.0 0.0 10.85151499402318 0.0 21 0.0 0.0 0.0 11.334026298009459 0.0 22 0.0 0.0 0.0 11.871004625539213 0.0 23 0.0 0.0 0.0 12.43012317447118 0.0 24 0.0 0.0 0.0 12.881762902136064 0.0 25 0.0 0.0 0.0 13.50761394937893 0.0 26 0.0 0.0 0.0 13.884621381425083 0.0 27 0.0 0.0 0.0 14.275245569357102 0.0 28 0.0 0.0 0.0 14.649550439166363 0.0 29 0.0 0.0 0.0 15.060028065069384 0.0 30 0.0 0.0 0.0 15.50314432721792 0.0 31 1.0394470141884517E-4 0.0 0.0 15.887012109557716 0.0 32 2.0788940283769034E-4 0.0 0.0 16.38251650122135 0.0 33 2.0788940283769034E-4 0.0 0.0 16.776466919598775 0.0 34 2.0788940283769034E-4 0.0 0.0 17.295566758484487 0.0 35 2.0788940283769034E-4 0.0 0.0 17.700535315212306 0.0 36 2.0788940283769034E-4 0.0 0.0 18.087001715087574 0.0 37 2.0788940283769034E-4 0.0 0.0 18.464113091835145 0.0 38 2.0788940283769034E-4 0.0 0.0 18.87854061639208 0.0 39 2.0788940283769034E-4 0.0 0.0 19.346291772776883 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACGC 25 3.89033E-5 45.0 44 TGCGACG 40 6.8139343E-9 45.0 1 GCTACGA 80 0.0 45.0 10 TACCGCG 20 7.032714E-4 45.0 1 TTGACCC 1745 0.0 43.32378 8 CTACGAA 85 0.0 42.35294 11 CTCAACT 1745 0.0 41.905445 2 CTTGACC 1710 0.0 41.842106 7 CATTAGA 1620 0.0 41.666664 17 TGCATTA 1650 0.0 41.181816 15 GCTCAAC 1875 0.0 41.04 1 ACTTGAC 1765 0.0 40.66572 6 TCAACTT 1775 0.0 40.563377 3 GCATTAG 1700 0.0 40.102943 16 GTAGACG 45 1.927765E-8 40.0 1 TACGAAT 90 0.0 40.0 12 ACCCTGC 1730 0.0 39.537575 11 CCTGCAT 1730 0.0 39.537575 13 ATTGACC 305 0.0 39.098362 7 TGACCCT 1755 0.0 38.974358 9 >>END_MODULE