SRR2936066.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936066.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	671971
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7429	1.1055536622860211	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2460	0.36608722697854523	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1431	0.2129556186204464	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	977	0.1453931791699344	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAGAC	50	2.1827873E-11	45.000004	21
TCTGCGA	20	7.0311927E-4	45.0	18
ATCTCGC	20	7.0311927E-4	45.0	34
ATCCGGT	20	7.0311927E-4	45.0	11
TGTTGCG	40	6.8084773E-9	45.0	1
TAGCACG	40	6.8084773E-9	45.0	1
CGAATAT	80	0.0	45.0	14
CCGGTTA	20	7.0311927E-4	45.0	27
TACGCGG	95	0.0	42.631577	2
CGTTATT	740	0.0	42.567566	1
CTGACTA	85	0.0	42.35294	22
AGTACGG	80	0.0	42.1875	2
CGTTTTT	3205	0.0	42.121685	1
CGGTTTT	820	0.0	41.707317	1
CGTTTTA	395	0.0	41.01266	1
GATCGGT	35	6.244416E-6	38.571426	10
TGCTACG	35	6.244416E-6	38.571426	1
ATACGCG	35	6.244416E-6	38.571426	1
ATTTGCG	35	6.244416E-6	38.571426	1
TATCGCG	35	6.244416E-6	38.571426	1