##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936066.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 671971 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.839360627169924 31.0 31.0 34.0 30.0 34.0 2 31.93851966825949 33.0 31.0 34.0 30.0 34.0 3 31.461927672473962 33.0 31.0 34.0 28.0 34.0 4 35.41506106662341 37.0 35.0 37.0 33.0 37.0 5 30.97002251585262 37.0 35.0 37.0 0.0 37.0 6 33.31247032982078 37.0 35.0 37.0 17.0 37.0 7 29.733198307665063 35.0 32.0 37.0 0.0 37.0 8 32.77657964406202 35.0 35.0 37.0 17.0 37.0 9 36.632595751900006 39.0 35.0 39.0 32.0 39.0 10 36.94231745119953 39.0 37.0 39.0 34.0 39.0 11 37.06553705442646 39.0 37.0 39.0 34.0 39.0 12 37.16126439980297 39.0 37.0 39.0 34.0 39.0 13 37.061559204191845 39.0 37.0 39.0 33.0 39.0 14 38.40120034941984 40.0 38.0 41.0 34.0 41.0 15 38.47219448458341 40.0 38.0 41.0 34.0 41.0 16 38.49086642131878 40.0 38.0 41.0 34.0 41.0 17 38.45936506188511 40.0 38.0 41.0 34.0 41.0 18 38.31972659534414 40.0 38.0 41.0 34.0 41.0 19 38.16032983566255 40.0 37.0 41.0 34.0 41.0 20 37.97802434926507 40.0 36.0 41.0 34.0 41.0 21 37.880713602223906 40.0 36.0 41.0 33.0 41.0 22 37.837399233002614 40.0 36.0 41.0 33.0 41.0 23 37.76235432779093 39.0 36.0 41.0 33.0 41.0 24 37.70842342898726 40.0 35.0 41.0 33.0 41.0 25 37.582691812593104 39.0 35.0 41.0 33.0 41.0 26 37.44197443044417 39.0 35.0 41.0 33.0 41.0 27 37.39804247504728 39.0 35.0 41.0 33.0 41.0 28 37.28379052072188 39.0 35.0 41.0 33.0 41.0 29 37.27822778066315 39.0 35.0 41.0 33.0 41.0 30 37.149372517564004 39.0 35.0 41.0 32.0 41.0 31 37.00335282326172 39.0 35.0 41.0 32.0 41.0 32 36.815707820724406 39.0 35.0 41.0 31.0 41.0 33 36.542222804257925 39.0 35.0 41.0 30.0 41.0 34 36.25132781027753 39.0 35.0 41.0 30.0 41.0 35 35.99101895766335 39.0 35.0 41.0 28.0 41.0 36 35.79104008952768 39.0 35.0 41.0 26.0 41.0 37 35.60776729948167 39.0 35.0 41.0 25.0 41.0 38 35.46810502238936 39.0 35.0 40.0 25.0 41.0 39 35.433874378507404 39.0 35.0 40.0 24.0 41.0 40 35.30747160219712 39.0 35.0 40.0 24.0 41.0 41 35.20732293506714 39.0 35.0 40.0 23.0 41.0 42 35.14943650842075 39.0 35.0 40.0 23.0 41.0 43 35.01024746603648 38.0 34.0 40.0 23.0 41.0 44 34.86258633185063 38.0 34.0 40.0 22.0 41.0 45 34.76834863409284 38.0 34.0 40.0 22.0 41.0 46 34.69472640932421 38.0 34.0 40.0 22.0 41.0 47 34.59670432206152 38.0 34.0 40.0 22.0 41.0 48 34.50675847618424 38.0 34.0 40.0 21.0 41.0 49 34.3644085831085 38.0 34.0 40.0 20.0 41.0 50 34.21038705539376 38.0 33.0 40.0 20.0 41.0 51 32.47815605137722 36.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 13.0 9 29.0 10 41.0 11 27.0 12 23.0 13 18.0 14 20.0 15 35.0 16 82.0 17 139.0 18 246.0 19 531.0 20 915.0 21 1621.0 22 2455.0 23 3818.0 24 6166.0 25 9189.0 26 11602.0 27 12528.0 28 12702.0 29 12532.0 30 13734.0 31 16773.0 32 21031.0 33 29088.0 34 41352.0 35 52255.0 36 61985.0 37 100257.0 38 130241.0 39 130509.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.85137900296293 20.14967907841261 24.46251400730091 16.536427911323553 2 36.15736393386024 23.59967915282058 24.77577157347564 15.467185339843533 3 31.935753179824722 22.753809316175847 30.26112734031677 15.049310163682659 4 26.46721361487326 25.2094212399047 30.97618796049234 17.3471771847297 5 20.632735638889176 38.31102830330476 25.837722163605275 15.218513894200791 6 23.7727520979328 33.921106714426664 29.211528473699012 13.094612713941526 7 66.93131102383883 18.803638847509788 11.000921170705283 3.264128957946102 8 81.35365960733425 4.354205761855794 11.687111497371166 2.6050231334387943 9 75.64835387241415 7.2599859220115155 13.298341743914543 3.793318461659804 10 36.27656550654716 31.932032781176567 20.514278145931893 11.27712356634438 11 26.377477599479736 26.069130959520574 31.45656583394224 16.096825607057447 12 25.122661543429704 23.5266105233708 33.50248745853616 17.848240474663342 13 22.233995217055497 24.320245962995426 34.85596848673529 18.589790333213784 14 18.949032026679724 27.399247884209288 34.03718315224913 19.61453693686186 15 18.754529585354128 27.323351751786905 36.87301981781952 17.049098845039442 16 21.90094513007258 25.47193256851858 35.44840476746764 17.178717533941196 17 21.935916877365244 25.947399515752913 32.43637002192059 19.680313584961258 18 21.68129279388545 26.22642941436461 33.76574286687967 18.32653492487027 19 22.68803266807645 27.362341529619584 31.933669756581757 18.015956045722213 20 24.110713111131286 26.71290874159748 32.33725860193372 16.83911954533752 21 23.552802129853816 26.444444775146547 32.46404978786287 17.538703307136768 22 22.110329165990795 25.305556340973045 32.51821879218002 20.06589570085614 23 21.320711756906178 26.51081668702965 33.35515967206918 18.81331188399499 24 20.907449875069016 25.81301871658152 33.85756230551616 19.421969102833305 25 20.641069331861047 27.498359304196164 32.303328566262536 19.557242797680257 26 20.39820170810943 28.653617492421546 31.98932692035817 18.958853879110855 27 20.656248558345524 28.172049091404244 32.582953728657934 18.588748621592302 28 19.122402603683792 28.68308304971494 33.366618499905506 18.827895846695768 29 20.319180440822596 27.003099836153645 33.052021590217436 19.625698132806328 30 20.968613228844696 26.84580138130961 32.79843921835913 19.387146171486567 31 21.000608657218837 27.16858316802362 31.919532241718763 19.911275933038777 32 21.456283083644976 27.990791269266087 31.97593348522481 18.57699216186413 33 21.67266146902173 28.440661873801105 30.929310937525578 18.95736571965159 34 20.529903820254148 27.989600741698673 31.69541542715385 19.785080010893328 35 20.80952898264955 27.57767820337485 31.805688043085194 19.80710477089041 36 20.76964630914132 29.594729534459074 30.12510956574019 19.51051459065942 37 21.359552718792923 29.58461005013609 30.169903165463985 18.885934065607 38 21.417293305812304 28.715376109980937 29.694882666067436 20.172447918139326 39 22.083839927615923 28.078741493308492 29.757831811194237 20.079586767881352 40 22.17298067922574 27.458030182850152 31.09985401155705 19.26913512636706 41 19.74311391414213 28.50212285946864 31.28096301774928 20.473800208639954 42 21.325622683121743 28.404201967049175 29.92748198955014 20.34269336027894 43 21.586050588492657 28.16684053329682 29.731342572819365 20.515766305391157 44 21.21103440475854 28.749157329706193 29.372249695299352 20.667558570235915 45 20.953136370468368 28.25092154274515 29.118220875603264 21.677721211183222 46 20.363081144870833 29.028931308047518 29.53490552419673 21.07308202288492 47 21.006710111001816 27.951206227649706 30.63614352405089 20.40594013729759 48 20.980964952356576 27.03256539344704 30.594623875137465 21.39184577905892 49 20.224682315159434 28.132464049787863 30.390597213272596 21.252256421780107 50 19.734184957386557 27.798967514967167 30.692544767556935 21.77430276008935 51 20.048037787344988 27.527229597705855 30.024956434131827 22.399776180817327 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 237.0 1 604.5 2 972.0 3 8646.5 4 16321.0 5 12764.5 6 9208.0 7 7174.5 8 5141.0 9 4781.5 10 4422.0 11 4287.5 12 4153.0 13 3999.0 14 3845.0 15 3692.0 16 3539.0 17 3563.0 18 3587.0 19 3665.0 20 3743.0 21 3888.5 22 4034.0 23 4257.5 24 4481.0 25 5647.0 26 8148.5 27 9484.0 28 11358.0 29 13232.0 30 14733.0 31 16234.0 32 18560.5 33 20887.0 34 22985.0 35 25083.0 36 26776.0 37 28469.0 38 30672.5 39 32876.0 40 35430.5 41 37985.0 42 39964.0 43 41943.0 44 44069.0 45 46195.0 46 48069.5 47 49944.0 48 49940.5 49 49937.0 50 47522.5 51 45108.0 52 40822.5 53 36537.0 54 33826.0 55 31115.0 56 29141.5 57 27168.0 58 25721.5 59 24275.0 60 23438.0 61 22601.0 62 19359.0 63 16117.0 64 13244.5 65 10372.0 66 8229.5 67 6087.0 68 4926.0 69 3765.0 70 3106.5 71 2448.0 72 2027.5 73 1607.0 74 1259.5 75 670.0 76 428.0 77 377.0 78 326.0 79 239.0 80 152.0 81 124.0 82 96.0 83 68.0 84 40.0 85 34.5 86 29.0 87 22.0 88 15.0 89 9.0 90 3.0 91 2.0 92 1.0 93 1.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 671971.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.52833534809162 #Duplication Level Percentage of deduplicated Percentage of total 1 74.1101131029323 29.294494034177067 2 8.572751826349542 6.777332180958193 3 4.03075533625917 4.779871459132867 4 2.544617713290184 4.023380092145138 5 1.7539158639809174 3.466468722188777 6 1.294974363235476 3.0712908538291983 7 1.01993610448186 2.822146346010962 8 0.8138671229763633 2.573665005263697 9 0.688296076187533 2.448647830648478 >10 5.105830565737451 36.684157394757555 >50 0.048220351377934394 1.2224980980012639 >100 0.015166078010662573 0.945810473642413 >500 3.88873795145194E-4 0.15017988505584873 >1k 7.77747590290388E-4 0.5981063794803556 >5k 3.88873795145194E-4 1.1419512447081885 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7429 1.1055536622860211 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2460 0.36608722697854523 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1431 0.2129556186204464 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 977 0.1453931791699344 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.976318918524758E-4 0.0 0.0 0.049258078101584744 0.0 2 2.976318918524758E-4 0.0 0.0 0.15878661430329583 0.0 3 2.976318918524758E-4 0.0 0.0 0.2601302734790638 0.0 4 2.976318918524758E-4 0.0 0.0 0.3672777545459551 0.0 5 2.976318918524758E-4 0.0 0.0 0.692440596394785 0.0 6 2.976318918524758E-4 0.0 0.0 1.0469201795910836 0.0 7 2.976318918524758E-4 0.0 0.0 1.3220808636086974 0.0 8 2.976318918524758E-4 0.0 0.0 1.8032028167882246 0.0 9 2.976318918524758E-4 0.0 0.0 2.0570828205383864 0.0 10 2.976318918524758E-4 0.0 0.0 2.508590400478592 0.0 11 2.976318918524758E-4 0.0 0.0 3.0156063282492847 0.0 12 2.976318918524758E-4 0.0 0.0 3.4318445290049717 0.0 13 2.976318918524758E-4 0.0 0.0 3.6337877676268766 0.0 14 2.976318918524758E-4 0.0 0.0 3.7398935370722843 0.0 15 2.976318918524758E-4 0.0 0.0 3.8701074897577423 0.0 16 2.976318918524758E-4 0.0 0.0 4.136339217019782 0.0 17 2.976318918524758E-4 0.0 0.0 4.480699315893097 0.0 18 2.976318918524758E-4 0.0 0.0 4.863453928815381 0.0 19 2.976318918524758E-4 0.0 0.0 5.1017082582432876 0.0 20 2.976318918524758E-4 0.0 0.0 5.338176796320079 0.0 21 2.976318918524758E-4 0.0 0.0 5.622415253039193 0.0 22 2.976318918524758E-4 0.0 0.0 5.9568046835354505 0.0 23 2.976318918524758E-4 0.0 0.0 6.274526728087968 0.0 24 2.976318918524758E-4 0.0 0.0 6.533764105891475 0.0 25 2.976318918524758E-4 0.0 0.0 6.776482913697168 0.0 26 2.976318918524758E-4 0.0 0.0 7.004766574748017 0.0 27 2.976318918524758E-4 0.0 0.0 7.238705241744063 0.0 28 2.976318918524758E-4 0.0 0.0 7.491097086034963 0.0 29 2.976318918524758E-4 0.0 0.0 7.7510785435681 0.0 30 2.976318918524758E-4 0.0 0.0 8.051984386230954 0.0 31 2.976318918524758E-4 0.0 0.0 8.346044695381199 0.0 32 2.976318918524758E-4 0.0 0.0 8.635045262369953 0.0 33 2.976318918524758E-4 0.0 0.0 8.916158584224616 0.0 34 2.976318918524758E-4 0.0 0.0 9.190872820404453 0.0 35 2.976318918524758E-4 0.0 0.0 9.482552074419878 0.0 36 2.976318918524758E-4 0.0 0.0 9.7736360646516 0.0 37 2.976318918524758E-4 0.0 0.0 10.086298367042625 0.0 38 2.976318918524758E-4 0.0 0.0 10.391817504029191 0.0 39 4.464478377787137E-4 0.0 0.0 10.711771787770603 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 50 2.1827873E-11 45.000004 21 TCTGCGA 20 7.0311927E-4 45.0 18 ATCTCGC 20 7.0311927E-4 45.0 34 ATCCGGT 20 7.0311927E-4 45.0 11 TGTTGCG 40 6.8084773E-9 45.0 1 TAGCACG 40 6.8084773E-9 45.0 1 CGAATAT 80 0.0 45.0 14 CCGGTTA 20 7.0311927E-4 45.0 27 TACGCGG 95 0.0 42.631577 2 CGTTATT 740 0.0 42.567566 1 CTGACTA 85 0.0 42.35294 22 AGTACGG 80 0.0 42.1875 2 CGTTTTT 3205 0.0 42.121685 1 CGGTTTT 820 0.0 41.707317 1 CGTTTTA 395 0.0 41.01266 1 GATCGGT 35 6.244416E-6 38.571426 10 TGCTACG 35 6.244416E-6 38.571426 1 ATACGCG 35 6.244416E-6 38.571426 1 ATTTGCG 35 6.244416E-6 38.571426 1 TATCGCG 35 6.244416E-6 38.571426 1 >>END_MODULE