##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936065.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 559077 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.787351295081 31.0 31.0 34.0 30.0 34.0 2 31.9170346839523 33.0 31.0 34.0 30.0 34.0 3 31.732074472747044 33.0 31.0 34.0 30.0 34.0 4 35.530785562632694 37.0 35.0 37.0 33.0 37.0 5 30.995367364423863 37.0 35.0 37.0 0.0 37.0 6 33.287699189914804 37.0 35.0 37.0 17.0 37.0 7 29.749059610751292 35.0 32.0 37.0 0.0 37.0 8 32.77157171552398 35.0 35.0 37.0 17.0 37.0 9 36.58268896770928 39.0 35.0 39.0 32.0 39.0 10 36.735113410138496 38.0 35.0 39.0 33.0 39.0 11 36.86823281945063 39.0 37.0 39.0 33.0 39.0 12 36.97656673409924 39.0 37.0 39.0 33.0 39.0 13 36.84639146307217 39.0 37.0 39.0 33.0 39.0 14 38.103483062261546 40.0 37.0 41.0 33.0 41.0 15 38.20805184259056 40.0 37.0 41.0 33.0 41.0 16 38.22991287425525 40.0 37.0 41.0 34.0 41.0 17 38.20635261332518 40.0 37.0 41.0 34.0 41.0 18 38.11976883327341 40.0 37.0 41.0 33.0 41.0 19 38.01298211158749 40.0 37.0 41.0 33.0 41.0 20 37.931199101376016 40.0 37.0 41.0 33.0 41.0 21 37.84263884938926 40.0 36.0 41.0 33.0 41.0 22 37.81536890267351 40.0 36.0 41.0 33.0 41.0 23 37.759251409018795 39.0 36.0 41.0 33.0 41.0 24 37.7261647322283 39.0 36.0 41.0 33.0 41.0 25 37.616330129839 39.0 36.0 41.0 33.0 41.0 26 37.46740073370931 39.0 36.0 41.0 33.0 41.0 27 37.43738161290842 39.0 36.0 41.0 33.0 41.0 28 37.34810052998066 39.0 36.0 41.0 32.0 41.0 29 37.35078888954473 39.0 36.0 41.0 32.0 41.0 30 37.21397231508361 39.0 36.0 41.0 32.0 41.0 31 37.085684082872305 39.0 35.0 41.0 31.0 41.0 32 36.9843348948356 39.0 35.0 41.0 31.0 41.0 33 36.76355314205378 39.0 35.0 41.0 30.0 41.0 34 36.60204229471075 39.0 35.0 41.0 30.0 41.0 35 36.46191848350048 39.0 35.0 41.0 30.0 41.0 36 36.290958132779565 39.0 35.0 40.0 30.0 41.0 37 36.160832944299266 39.0 35.0 40.0 29.0 41.0 38 36.08126250945755 39.0 35.0 40.0 29.0 41.0 39 36.05396752146842 39.0 35.0 40.0 29.0 41.0 40 35.922481160913435 39.0 35.0 40.0 28.0 41.0 41 35.8344181570696 39.0 35.0 40.0 27.0 41.0 42 35.7600759823781 39.0 35.0 40.0 27.0 41.0 43 35.55077565344308 39.0 35.0 40.0 26.0 41.0 44 35.39330718308927 38.0 35.0 40.0 26.0 41.0 45 35.25625808251815 38.0 34.0 40.0 25.0 41.0 46 35.13854442232465 38.0 34.0 40.0 24.0 41.0 47 34.959239961579534 38.0 34.0 40.0 23.0 41.0 48 34.85565315689968 38.0 34.0 40.0 23.0 41.0 49 34.665915428465134 38.0 34.0 40.0 23.0 41.0 50 34.48140953750557 38.0 34.0 40.0 22.0 41.0 51 32.55994791415136 36.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 16.0 10 22.0 11 21.0 12 12.0 13 10.0 14 8.0 15 28.0 16 46.0 17 83.0 18 184.0 19 369.0 20 663.0 21 1162.0 22 1801.0 23 2745.0 24 4134.0 25 5879.0 26 7028.0 27 7878.0 28 8839.0 29 9939.0 30 12179.0 31 15092.0 32 19076.0 33 25831.0 34 36634.0 35 46203.0 36 53957.0 37 85782.0 38 108451.0 39 104979.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.830470579186766 21.231601371546315 27.17139141835561 11.766536630911306 2 32.01347935973041 24.148194255889617 27.05101443987143 16.787311944508538 3 31.676674232708553 23.790998377683216 28.399487011628093 16.132840377980134 4 26.565929201165495 27.080885101694403 28.64954201299642 17.703643684143685 5 21.434077953484046 39.80006331864841 23.05138648164743 15.71447224622011 6 24.94075055850983 35.07745802456549 26.44877181497361 13.533019601951073 7 70.88057637856681 18.495663388048516 7.137478379543426 3.4862818538412417 8 85.72128704990547 4.068312593792984 7.386460183480987 2.8239401728205595 9 80.04854429711828 7.199366098050895 8.925246432960039 3.82684317187078 10 36.996335030773935 33.91518520704662 17.108019110068916 11.980460652110532 11 26.015021186705944 26.73388459908027 29.981737757053146 17.269356457160644 12 24.796584370310352 24.184146369820258 32.43935987350579 18.579909386363596 13 22.270456484527177 26.903092060664274 32.72804998238168 18.098401472426875 14 18.95946354437761 29.245882052025035 31.803669262015788 19.99098514158157 15 17.93921052019668 29.52741751136248 35.116271998311504 17.41709997012934 16 22.329661209457733 26.893075551310464 32.659544213051156 18.11771902618065 17 21.927927637874568 27.110040298563526 29.92360622955335 21.038425834008553 18 22.185673887496712 27.550051245177322 31.176921962448823 19.087352904877143 19 22.003051458028143 28.932508402241552 30.269175802259795 18.79526433747051 20 23.571708369330164 28.00687561820644 30.019478533368392 18.40193747909501 21 22.644823521625824 27.79778098544565 31.096253288902957 18.461142204025563 22 21.87784509110552 25.93542571059085 30.650160890181493 21.536568308122135 23 19.92480463335104 27.67919266934608 31.17441783511037 21.221584862192508 24 20.204730296542337 27.358664370024165 31.941753998107597 20.494851335325905 25 19.963082008381672 29.082934908787163 30.521198332251192 20.432784750579973 26 19.53147777497554 31.061195506164623 29.73436574926173 19.672960969598105 27 19.887958188228097 29.683925470015758 31.070854283041516 19.357262058714632 28 18.401222014141165 28.496969111589284 32.91371313790408 20.188095736365476 29 20.001001650935383 26.969093702656345 32.189841470852855 20.84006317555542 30 20.50146938614896 28.73182048268843 30.82688073378086 19.939829397381757 31 21.143241449746636 28.519863990112277 29.66371358506968 20.67318097507141 32 21.388288196438058 28.754536494972964 29.939346458537912 19.917828850051066 33 20.701441840748235 29.706820348538756 29.637599114254385 19.954138696458628 34 19.943048989674054 27.464374316954554 30.738163079504254 21.85441361386714 35 19.58925156999841 27.799748514068725 30.216052529436908 22.394947386495957 36 21.043076356208537 29.492359728624145 29.380389463347623 20.084174451819695 37 19.901552022351122 29.197767033879053 31.079082130010715 19.821598813759106 38 19.478712234629576 28.88922277253402 30.011429552637654 21.620635440198757 39 20.677652631032934 27.64485035156159 30.0656260228913 21.611870994514174 40 21.00175825512407 27.36152622983954 29.298826458609454 22.33788905642693 41 19.408775535391367 27.635907039638546 29.390763705178358 23.56455371979173 42 21.390792323776513 27.7582515467458 28.88636091271864 21.96459521675905 43 21.23410549888477 27.914401772922155 29.791602945569217 21.059889782623863 44 20.25517057578831 28.43543912555873 29.789098818230762 21.520291480422195 45 19.96648046691243 28.47300103563552 29.51042521870869 22.050093278743358 46 20.521323538618116 28.781724163219017 28.41522724061265 22.28172505755021 47 19.95664282379708 27.493708380062138 30.07546366600665 22.47418513013413 48 20.346750089880285 26.858375501049053 30.43033428311306 22.364540125957603 49 20.7386460183481 27.1211300053481 30.194230848344684 21.945993127959117 50 19.5069731003064 27.054055165925266 29.61631403187754 23.822657701890794 51 18.805817445539702 27.241149251355356 28.518790792681507 25.43424251042343 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 302.0 1 489.5 2 677.0 3 2804.5 4 4932.0 5 3898.5 6 2865.0 7 2340.5 8 1816.0 9 1778.5 10 1741.0 11 1753.5 12 1766.0 13 1736.0 14 1706.0 15 1698.5 16 1691.0 17 1728.0 18 1765.0 19 1973.5 20 2182.0 21 2445.5 22 2709.0 23 3293.0 24 3877.0 25 4695.5 26 6537.0 27 7560.0 28 8934.0 29 10308.0 30 12615.5 31 14923.0 32 16700.5 33 18478.0 34 20428.5 35 22379.0 36 24142.5 37 25906.0 38 28088.0 39 30270.0 40 32625.5 41 34981.0 42 37501.0 43 40021.0 44 42561.0 45 45101.0 46 47722.0 47 50343.0 48 51414.0 49 52485.0 50 49018.5 51 45552.0 52 40080.5 53 34609.0 54 29748.5 55 24888.0 56 21995.5 57 19103.0 58 17309.0 59 15515.0 60 13827.0 61 12139.0 62 10356.5 63 8574.0 64 7079.0 65 5584.0 66 4175.5 67 2767.0 68 2199.0 69 1631.0 70 1342.5 71 1054.0 72 820.0 73 586.0 74 479.5 75 285.0 76 197.0 77 142.0 78 87.0 79 67.0 80 47.0 81 37.0 82 27.0 83 20.5 84 14.0 85 15.0 86 16.0 87 12.0 88 8.0 89 7.5 90 7.0 91 4.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 559077.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.03826073002968 #Duplication Level Percentage of deduplicated Percentage of total 1 76.83309067136578 33.06762589008251 2 8.627117061284023 7.4259222686405835 3 3.5731355329434535 4.6134461607166175 4 2.099877277606531 3.615002630987792 5 1.4797878052916351 3.1843746694629886 6 1.0990250986209826 2.838007724597786 7 0.8052739952276974 2.426031451600562 8 0.6290500962699311 2.165857764441245 9 0.5031281257204576 1.9488383509831384 >10 4.288597318537019 36.0179309737519 >50 0.049106599797921376 1.307222591124387 >100 0.011956389512258452 0.8512659975355348 >500 4.2701391115208755E-4 0.13397515375721175 >1k 4.2701391115208755E-4 0.4044983723177271 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2201 0.39368459085242286 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 729 0.13039348783799012 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09873416363041226 0.0 2 0.0 0.0 0.0 0.41479080699080806 0.0 3 0.0 0.0 0.0 0.5804209438055938 0.0 4 0.0 0.0 0.0 0.8081176653663091 0.0 5 0.0 0.0 0.0 1.42001906714102 0.0 6 0.0 0.0 0.0 1.8838192234701123 0.0 7 0.0 0.0 0.0 2.3497657746607357 0.0 8 0.0 0.0 0.0 3.132305567927137 0.0 9 0.0 0.0 0.0 3.46785863127977 0.0 10 0.0 0.0 0.0 4.268821647107644 0.0 11 0.0 0.0 0.0 5.293725193488553 0.0 12 0.0 0.0 0.0 6.122591342516326 0.0 13 0.0 0.0 0.0 6.473348036138135 0.0 14 0.0 0.0 0.0 6.627351867452963 0.0 15 0.0 0.0 0.0 6.891716167898161 0.0 16 0.0 0.0 0.0 7.498430448757506 0.0 17 0.0 0.0 0.0 8.288661490277725 0.0 18 0.0 0.0 0.0 9.088193576197911 0.0 19 0.0 0.0 0.0 9.584547387926886 0.0 20 0.0 0.0 0.0 10.069274894155903 0.0 21 0.0 0.0 0.0 10.655061825115324 0.0 22 0.0 0.0 0.0 11.300947812197604 0.0 23 0.0 0.0 0.0 11.966687951749044 0.0 24 0.0 0.0 0.0 12.48933510053177 0.0 25 0.0 0.0 0.0 12.9447285436532 0.0 26 0.0 0.0 0.0 13.36005594935939 0.0 27 0.0 0.0 0.0 13.79899369854242 0.0 28 0.0 0.0 0.0 14.240972173779282 0.0 29 0.0 0.0 0.0 14.73768371798518 0.0 30 0.0 0.0 0.0 15.268558713737105 0.0 31 0.0 0.0 0.0 15.791921327473675 0.0 32 0.0 0.0 0.0 16.28773854048727 0.0 33 0.0 0.0 0.0 16.764774798462465 0.0 34 0.0 0.0 0.0 17.235371871853072 0.0 35 0.0 0.0 0.0 17.73208341605897 0.0 36 0.0 0.0 0.0 18.22968929145717 0.0 37 0.0 0.0 0.0 18.730157026670746 0.0 38 1.7886623846089178E-4 0.0 0.0 19.215599997853605 0.0 39 1.7886623846089178E-4 0.0 0.0 19.725368777467146 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAG 20 7.030173E-4 45.000004 2 GCCGATC 25 3.8882255E-5 45.000004 9 GAGCGTA 25 3.8882255E-5 45.000004 8 AATTGCG 30 2.1634933E-6 45.000004 1 TACTCGC 20 7.030173E-4 45.000004 45 TTCGGTG 30 2.1634933E-6 45.000004 21 TCGAGTC 20 7.030173E-4 45.000004 29 CGCACGG 20 7.030173E-4 45.000004 2 TGCAACG 45 3.8380676E-10 45.000004 1 AAGCGCC 35 1.2104283E-7 45.0 14 TACGCGG 35 1.2104283E-7 45.0 2 TGCGACG 35 1.2104283E-7 45.0 1 CGATGAT 35 1.2104283E-7 45.0 10 CGCCCCG 35 1.2104283E-7 45.0 17 CGACGGG 60 3.6379788E-12 41.250004 3 CGTTTTT 1005 0.0 40.97015 1 TTGTGCG 55 6.002665E-11 40.909092 1 GCGGCTA 50 1.0786607E-9 40.500004 24 CGGCTAC 50 1.0786607E-9 40.500004 25 GGCCGAT 95 0.0 40.263157 8 >>END_MODULE