SRR2936063.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936063.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	468437
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGAATGATACCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGC	1999	0.4267382807079714	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGC	1475	0.3148769204823701	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCG	1353	0.288832863330608	No Hit
GAATCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTC	1351	0.2884059115740217	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1182	0.2523284881424824	No Hit
GCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC	929	0.1983190909343199	No Hit
GTGAATCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCT	736	0.15711824642374536	No Hit
GTGAATGATACGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTAT	544	0.11613087779146396	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTCGGA	35	1.2098644E-7	45.000004	14
CTCGCGC	30	2.1627366E-6	45.000004	33
TCGCGCA	30	2.1627366E-6	45.000004	34
CTGTCGA	20	7.0290023E-4	45.0	43
CCGGGTT	20	7.0290023E-4	45.0	5
TACCCGT	20	7.0290023E-4	45.0	32
AAATACG	20	7.0290023E-4	45.0	1
CTATACG	20	7.0290023E-4	45.0	1
TGACGTG	20	7.0290023E-4	45.0	29
CGTTCTA	40	6.7993824E-9	45.0	35
CGCGAAG	20	7.0290023E-4	45.0	2
CGACAAG	20	7.0290023E-4	45.0	2
TTATCGA	20	7.0290023E-4	45.0	19
ATCCGGT	25	3.8872542E-5	45.0	39
CTTATCG	20	7.0290023E-4	45.0	18
CGAGGGT	25	3.8872542E-5	45.0	4
GAACGAC	25	3.8872542E-5	45.0	32
TAGTGCG	25	3.8872542E-5	45.0	1
AGGGCGC	45	3.8380676E-10	45.0	6
GATTACG	20	7.0290023E-4	45.0	1