##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936063.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 468437 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.768549452754588 31.0 31.0 34.0 30.0 34.0 2 31.866468703368863 33.0 31.0 34.0 30.0 34.0 3 31.780551066632224 33.0 31.0 34.0 30.0 34.0 4 35.54452359655621 37.0 35.0 37.0 33.0 37.0 5 31.07204170464758 37.0 35.0 37.0 0.0 37.0 6 33.30983035071952 37.0 35.0 37.0 17.0 37.0 7 29.677173237809992 35.0 32.0 37.0 0.0 37.0 8 32.63143389612691 35.0 33.0 37.0 17.0 37.0 9 36.44258032563611 39.0 35.0 39.0 32.0 39.0 10 36.70770669268226 38.0 35.0 39.0 33.0 39.0 11 36.828570330695484 39.0 37.0 39.0 33.0 39.0 12 36.91443886798011 39.0 37.0 39.0 33.0 39.0 13 36.76167766423233 39.0 35.0 39.0 33.0 39.0 14 38.02626180254762 40.0 37.0 41.0 33.0 41.0 15 38.06683289321723 40.0 37.0 41.0 33.0 41.0 16 38.13339680682781 40.0 37.0 41.0 33.0 41.0 17 38.07791015654186 40.0 37.0 41.0 33.0 41.0 18 38.01471275753196 40.0 37.0 41.0 33.0 41.0 19 37.908448734835204 40.0 37.0 41.0 33.0 41.0 20 37.876154103967025 40.0 36.0 41.0 33.0 41.0 21 37.79354107382636 40.0 36.0 41.0 33.0 41.0 22 37.83651163336799 40.0 36.0 41.0 33.0 41.0 23 37.799958158727854 39.0 36.0 41.0 33.0 41.0 24 37.74847631591868 40.0 36.0 41.0 33.0 41.0 25 37.653667408851135 39.0 36.0 41.0 33.0 41.0 26 37.478025860467895 39.0 36.0 41.0 33.0 41.0 27 37.44651682083183 39.0 36.0 41.0 33.0 41.0 28 37.368800927339215 39.0 36.0 41.0 32.0 41.0 29 37.362968766344245 39.0 36.0 41.0 32.0 41.0 30 37.255812414476225 39.0 36.0 41.0 32.0 41.0 31 37.15751531155737 39.0 36.0 41.0 32.0 41.0 32 37.03563766312226 39.0 35.0 41.0 31.0 41.0 33 36.86519638713423 39.0 35.0 41.0 31.0 41.0 34 36.75879360511659 39.0 35.0 41.0 30.0 41.0 35 36.64920362823603 39.0 35.0 41.0 30.0 41.0 36 36.522563332956196 39.0 35.0 41.0 30.0 41.0 37 36.340216507235766 39.0 35.0 40.0 30.0 41.0 38 36.32003236294315 39.0 35.0 40.0 30.0 41.0 39 36.299348685095325 39.0 35.0 40.0 30.0 41.0 40 36.21906254202806 39.0 35.0 40.0 29.0 41.0 41 36.11071286000038 39.0 35.0 40.0 29.0 41.0 42 36.040195373123815 39.0 35.0 40.0 28.0 41.0 43 35.88033823118157 39.0 35.0 40.0 28.0 41.0 44 35.699077997681655 38.0 35.0 40.0 27.0 41.0 45 35.61402066873454 38.0 35.0 40.0 27.0 41.0 46 35.4837662268352 38.0 34.0 40.0 26.0 41.0 47 35.327747381184665 38.0 34.0 40.0 26.0 41.0 48 35.273311032219915 38.0 34.0 40.0 26.0 41.0 49 35.1064710942987 38.0 34.0 40.0 26.0 41.0 50 34.95230308451296 38.0 34.0 40.0 24.0 41.0 51 32.935654100764886 36.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 9.0 9 14.0 10 19.0 11 14.0 12 5.0 13 4.0 14 9.0 15 22.0 16 37.0 17 97.0 18 141.0 19 274.0 20 531.0 21 868.0 22 1320.0 23 1957.0 24 2849.0 25 3913.0 26 5015.0 27 5741.0 28 6870.0 29 7991.0 30 10047.0 31 12719.0 32 16461.0 33 23056.0 34 31766.0 35 39977.0 36 45883.0 37 71644.0 38 90788.0 39 88385.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.59628082324838 21.60141064860376 26.46609896314766 11.336209565000203 2 28.22087068271721 26.42852720856807 28.465300563362845 16.885301545351883 3 32.59264319428226 25.703776601762883 26.43194282262076 15.271637381334097 4 26.19541154947197 27.982418126663777 27.938015143978806 17.88415517988545 5 21.360609857889106 40.61592060405135 22.226681496124346 15.7967880419352 6 23.651846459609295 36.560092392360126 26.48296355753282 13.30509759049776 7 70.8744185450765 18.505369985718463 7.227866287248872 3.392345181956165 8 84.24612060960172 5.861193714416239 6.644436711873741 3.2482489641083 9 78.93569466118176 7.45607200114423 8.755926624071114 4.852306713602896 10 36.28876455104955 36.39187340026513 15.575627032023517 11.743735016661793 11 25.972329256655648 25.937746164372154 29.4799514128901 18.609973166082096 12 24.622307802329875 24.68250800000854 31.6029690225153 19.092215175146286 13 22.441224753808946 26.615318602074563 33.35261732100581 17.590839323110686 14 19.81504449904683 29.64945126025485 30.389999082053727 20.1455051586446 15 17.93667024594556 28.50415317321219 36.66618990387181 16.892986676970438 16 21.15204392479672 27.2512632435098 31.97100143669266 19.62569139500082 17 20.757113549954422 26.371742624942097 31.252868582114562 21.61827524298892 18 20.993644823103214 28.004619618006267 31.205263461255196 19.796472097635327 19 21.34246440823419 29.73398770805893 29.659698102412918 19.263849781293963 20 23.16533493297925 28.46764879802407 30.36331459726708 18.0037016717296 21 21.65670090108168 29.923981239739817 29.90028541724928 18.519032441929223 22 20.505212013568528 26.944498406402566 30.461940453038512 22.088349126990394 23 19.049946951244245 29.3804716536055 30.743942088263736 20.82563930688652 24 20.713564470782625 26.60336395289014 31.610227202377267 21.072844373949966 25 19.71748602266687 30.96851871222811 28.96547454620365 20.348520718901366 26 20.183290389102485 29.813400734783972 28.92576803284113 21.077540843272413 27 20.250321814886526 30.662180826877467 29.777109835474143 19.310387522761864 28 17.607276965739256 28.917655949465992 32.94423796583105 20.5308291189637 29 20.77397814433958 27.17377149968939 30.92945262650047 21.12279772947056 30 20.790629262846444 29.34140556787786 30.036696503478588 19.831268665797108 31 21.94254510211619 28.22321891737843 27.477120722743937 22.357115257761446 32 21.175099319652375 31.002888328633304 27.787087698025566 20.03492465368876 33 19.73669885171325 30.672854620792123 27.428021270736515 22.162425256758112 34 20.500515544246078 28.603846408375084 28.490490717001432 22.405147330377403 35 19.04140791611252 29.025034316247435 28.075493609599583 23.858064158040463 36 21.528188422349217 29.980125395730912 27.885500077918696 20.60618610400118 37 18.77499002000269 30.546049949086 29.216735654954668 21.46222437595664 38 18.267344381421623 30.806490520603624 26.921869963303497 24.004295134671256 39 19.680554695722158 30.217510572392875 28.28171130803075 21.82022342385422 40 19.95209601291102 28.629463513770258 29.15397374673649 22.26446672658223 41 18.83625759707282 28.768222834660794 27.950396744919807 24.445122823346576 42 19.85987443348839 28.56755550906525 28.761818558312 22.810751499134355 43 20.84549256356778 29.045528000563575 27.65729436402334 22.451685071845308 44 19.282208706827173 29.04382019353723 28.892252319949108 22.78171877968649 45 19.91708596887095 28.224499772648187 28.059055966971012 23.79935829150985 46 21.284185493460168 29.31023808964706 27.419268759726496 21.98630765716628 47 18.9984992645756 27.87973622920478 30.438458106426264 22.683306399793356 48 19.79305648358264 28.480243874843364 28.425167098243737 23.301532543330268 49 19.426091448796743 26.64755345969682 31.2238358626667 22.702519228839737 50 19.119326611689512 27.46730083234245 29.009450577132036 24.403921978836003 51 18.403328515894344 26.598240531811108 28.234746614806262 26.763684337488286 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 171.0 1 381.0 2 591.0 3 1707.0 4 2823.0 5 2176.5 6 1530.0 7 1291.0 8 1052.0 9 1057.0 10 1062.0 11 1103.5 12 1145.0 13 1138.0 14 1131.0 15 1136.5 16 1142.0 17 1182.0 18 1222.0 19 1448.0 20 1674.0 21 1998.0 22 2322.0 23 2678.5 24 3035.0 25 3844.0 26 5589.5 27 6526.0 28 7882.5 29 9239.0 30 10449.5 31 11660.0 32 13688.5 33 15717.0 34 17914.0 35 20111.0 36 21418.0 37 22725.0 38 23927.5 39 25130.0 40 26971.5 41 28813.0 42 31279.0 43 33745.0 44 37988.0 45 42231.0 46 46228.0 47 50225.0 48 46420.0 49 42615.0 50 39698.5 51 36782.0 52 32126.5 53 27471.0 54 24058.0 55 20645.0 56 17963.5 57 15282.0 58 13658.5 59 12035.0 60 10825.0 61 9615.0 62 7895.0 63 6175.0 64 4930.5 65 3686.0 66 2802.0 67 1918.0 68 1479.0 69 1040.0 70 826.5 71 613.0 72 498.5 73 384.0 74 313.5 75 176.5 76 110.0 77 74.0 78 38.0 79 45.5 80 53.0 81 38.5 82 24.0 83 21.5 84 19.0 85 12.0 86 5.0 87 4.0 88 3.0 89 2.5 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 468437.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.020799319088205 #Duplication Level Percentage of deduplicated Percentage of total 1 74.24228852324661 29.712357299786984 2 9.375774241715886 7.504519587775758 3 3.9780336406706076 4.776122580535807 4 2.5116228723632106 4.020686197603198 5 1.7177532791193468 3.437292963167054 6 1.2708682420986388 3.0516697726819215 7 0.9056883175395797 2.5372459281325908 8 0.6876591004714495 2.2016533487930077 9 0.5796959755083546 2.0879906671712636 >10 4.641114265629556 35.15323382141408 >50 0.06233143078276383 1.6704981284953089 >100 0.022908132680843817 1.806525927599268 >500 0.0015982418149425915 0.4709802636689228 >1k 0.002663736358237653 1.5692235131748629 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGAATGATACCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGC 1999 0.4267382807079714 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGC 1475 0.3148769204823701 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCG 1353 0.288832863330608 No Hit GAATCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTC 1351 0.2884059115740217 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1182 0.2523284881424824 No Hit GCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC 929 0.1983190909343199 No Hit GTGAATCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCT 736 0.15711824642374536 No Hit GTGAATGATACGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTAT 544 0.11613087779146396 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09414286232727133 0.0 2 0.0 0.0 0.0 0.5862047617929412 0.0 3 0.0 0.0 0.0 0.7527159468615844 0.0 4 0.0 0.0 0.0 1.0385601478960884 0.0 5 0.0 0.0 0.0 1.9614163697572993 0.0 6 0.0 0.0 0.0 2.4359732472029325 0.0 7 0.0 0.0 0.0 3.179509731297912 0.0 8 0.0 0.0 0.0 4.1822059316407545 0.0 9 0.0 0.0 0.0 4.527396426840749 0.0 10 0.0 0.0 0.0 5.760006148105295 0.0 11 0.0 0.0 0.0 6.687131887532368 0.0 12 0.0 0.0 0.0 8.488014396813233 0.0 13 0.0 0.0 0.0 8.84900210700692 0.0 14 0.0 0.0 0.0 9.143385343173149 0.0 15 0.0 0.0 0.0 9.401477680029545 0.0 16 0.0 0.0 0.0 9.942852507380929 0.0 17 0.0 0.0 0.0 10.68105209451858 0.0 18 0.0 0.0 0.0 11.429925475570888 0.0 19 0.0 0.0 0.0 11.893168131466984 0.0 20 0.0 0.0 0.0 12.316277322243973 0.0 21 0.0 0.0 0.0 12.833956327104818 0.0 22 0.0 0.0 0.0 13.442789531996832 0.0 23 0.0 0.0 0.0 14.067419951882536 0.0 24 0.0 0.0 0.0 14.54603287101574 0.0 25 0.0 0.0 0.0 14.957614364364899 0.0 26 0.0 0.0 0.0 15.331624103134466 0.0 27 0.0 0.0 0.0 15.724419719193829 0.0 28 0.0 0.0 0.0 16.163753076721097 0.0 29 0.0 0.0 0.0 16.60842333120569 0.0 30 0.0 0.0 0.0 17.120765439109206 0.0 31 0.0 0.0 0.0 17.59510884067655 0.0 32 0.0 0.0 0.0 18.03764433637821 0.0 33 0.0 0.0 0.0 18.482955018497684 0.0 34 0.0 0.0 0.0 18.919086237850554 0.0 35 2.1347587829313226E-4 0.0 0.0 19.388306218338858 0.0 36 2.1347587829313226E-4 0.0 0.0 19.8470658807908 0.0 37 2.1347587829313226E-4 0.0 0.0 20.282983624265377 0.0 38 2.1347587829313226E-4 0.0 0.0 20.749214942457577 0.0 39 2.1347587829313226E-4 0.0 0.0 21.21501930889319 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGGA 35 1.2098644E-7 45.000004 14 CTCGCGC 30 2.1627366E-6 45.000004 33 TCGCGCA 30 2.1627366E-6 45.000004 34 CTGTCGA 20 7.0290023E-4 45.0 43 CCGGGTT 20 7.0290023E-4 45.0 5 TACCCGT 20 7.0290023E-4 45.0 32 AAATACG 20 7.0290023E-4 45.0 1 CTATACG 20 7.0290023E-4 45.0 1 TGACGTG 20 7.0290023E-4 45.0 29 CGTTCTA 40 6.7993824E-9 45.0 35 CGCGAAG 20 7.0290023E-4 45.0 2 CGACAAG 20 7.0290023E-4 45.0 2 TTATCGA 20 7.0290023E-4 45.0 19 ATCCGGT 25 3.8872542E-5 45.0 39 CTTATCG 20 7.0290023E-4 45.0 18 CGAGGGT 25 3.8872542E-5 45.0 4 GAACGAC 25 3.8872542E-5 45.0 32 TAGTGCG 25 3.8872542E-5 45.0 1 AGGGCGC 45 3.8380676E-10 45.0 6 GATTACG 20 7.0290023E-4 45.0 1 >>END_MODULE