##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936061.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 872406 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.825541089813687 31.0 31.0 34.0 30.0 34.0 2 31.9235516491175 33.0 31.0 34.0 30.0 34.0 3 31.53641194581422 33.0 31.0 34.0 30.0 34.0 4 35.45158217618861 37.0 35.0 37.0 33.0 37.0 5 31.016363940642314 37.0 35.0 37.0 0.0 37.0 6 33.30822117225237 37.0 35.0 37.0 17.0 37.0 7 29.669314516406352 35.0 32.0 37.0 0.0 37.0 8 32.67464918856587 35.0 33.0 37.0 17.0 37.0 9 36.52192098632976 39.0 35.0 39.0 32.0 39.0 10 36.872012572128114 38.0 37.0 39.0 33.0 39.0 11 36.994229750827024 39.0 37.0 39.0 33.0 39.0 12 37.075367432135955 39.0 37.0 39.0 34.0 39.0 13 36.95003817030144 39.0 37.0 39.0 33.0 39.0 14 38.278954981969406 40.0 38.0 41.0 34.0 41.0 15 38.3427899395465 40.0 38.0 41.0 34.0 41.0 16 38.357545684004926 40.0 38.0 41.0 34.0 41.0 17 38.300666203579524 40.0 37.0 41.0 34.0 41.0 18 38.16972602205853 40.0 37.0 41.0 33.0 41.0 19 38.00074735845467 40.0 37.0 41.0 34.0 41.0 20 37.86479460251305 40.0 36.0 41.0 33.0 41.0 21 37.78286142002691 40.0 36.0 41.0 33.0 41.0 22 37.747543001767525 39.0 36.0 41.0 33.0 41.0 23 37.70672255807502 39.0 36.0 41.0 33.0 41.0 24 37.64853176158807 39.0 35.0 41.0 33.0 41.0 25 37.51072321831808 39.0 35.0 41.0 33.0 41.0 26 37.344918535635934 39.0 35.0 41.0 33.0 41.0 27 37.33154632132287 39.0 35.0 41.0 33.0 41.0 28 37.20437044220237 39.0 35.0 41.0 32.0 41.0 29 37.18464224225877 39.0 35.0 41.0 32.0 41.0 30 37.051274292015414 39.0 35.0 41.0 32.0 41.0 31 36.92535470870214 39.0 35.0 41.0 31.0 41.0 32 36.784729816163576 39.0 35.0 41.0 31.0 41.0 33 36.50712397668058 39.0 35.0 41.0 30.0 41.0 34 36.232765478458425 39.0 35.0 41.0 30.0 41.0 35 36.00967897974108 39.0 35.0 41.0 28.0 41.0 36 35.81597100432597 39.0 35.0 40.0 27.0 41.0 37 35.68335041253728 39.0 35.0 40.0 26.0 41.0 38 35.56372147830253 39.0 35.0 40.0 25.0 41.0 39 35.50774180828651 39.0 35.0 40.0 25.0 41.0 40 35.35485656907449 39.0 35.0 40.0 24.0 41.0 41 35.230125652505826 38.0 35.0 40.0 24.0 41.0 42 35.15575890124552 38.0 34.0 40.0 24.0 41.0 43 34.96202800072443 38.0 34.0 40.0 23.0 41.0 44 34.73488375825017 38.0 34.0 40.0 22.0 41.0 45 34.66613251169753 38.0 34.0 40.0 22.0 41.0 46 34.50932364059853 38.0 34.0 40.0 22.0 41.0 47 34.34880090233217 38.0 33.0 40.0 20.0 41.0 48 34.27198689600943 38.0 33.0 40.0 20.0 41.0 49 34.10348965963095 38.0 33.0 40.0 20.0 41.0 50 33.95727218749069 38.0 33.0 40.0 20.0 41.0 51 32.06020132828064 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 24.0 9 40.0 10 47.0 11 34.0 12 24.0 13 23.0 14 34.0 15 43.0 16 79.0 17 198.0 18 390.0 19 749.0 20 1299.0 21 2097.0 22 3308.0 23 5139.0 24 7683.0 25 11321.0 26 14502.0 27 15506.0 28 16227.0 29 17231.0 30 19535.0 31 23566.0 32 29513.0 33 40153.0 34 56777.0 35 69660.0 36 81911.0 37 129710.0 38 164243.0 39 161321.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.074224615603285 19.693812284647287 24.02264541967845 15.209317680070978 2 34.900952079650985 24.51266955981504 25.324103685669286 15.262274674864685 3 31.170922712590237 24.314596644222988 29.21953769231298 15.294942950873791 4 26.565956676134732 24.627065838611838 31.19808896316623 17.60888852208719 5 21.479678039811738 38.46041865828525 24.490432207022877 15.569471094880136 6 24.089930605704225 34.689467977065725 27.99098126331089 13.22962015391916 7 66.99908070325054 18.71147149377698 10.890915468256752 3.398532334715717 8 80.59447092294184 4.988846935944961 11.411315373805316 3.0053667673078817 9 74.90801301229016 7.263590575947437 12.758279975149184 5.070116436613229 10 37.32470890846693 30.11739946767904 20.22934276013691 12.328548863717122 11 26.625332700600406 25.47884815097558 30.98350997127484 16.912309177149172 12 25.463144453385233 22.90080535897277 32.982006084323125 18.654044103318867 13 22.265436046978127 23.760382207366753 34.82243359169927 19.151748153955843 14 19.416418502394528 27.135530933991742 33.228450973514626 20.219599590099104 15 19.30190759806787 26.80987980366939 36.133405776668205 17.75480682159453 16 22.386824483096174 25.932879874737218 33.76455457665353 17.915741065513075 17 21.92557135095357 25.16099155668347 32.50424687588118 20.409190216481775 18 22.376622810938944 26.2608235156567 32.575085453332505 18.787468220071847 19 22.59888171333072 27.82695213008622 30.67768905761767 18.896477098965388 20 24.33683399701515 27.13851119776801 31.514684676629916 17.009970128586918 21 23.40596006905042 26.964509643445826 31.499439481159 18.130090806344754 22 22.53320128472294 24.50819916415064 32.11566632966761 20.842933221458818 23 21.66949791725412 26.88851291715096 32.520294450061094 18.921694715533825 24 22.16536795941339 25.047168405535952 32.87219482672059 19.915268808330065 25 21.294328558033758 27.386560844377506 30.93261623601855 20.386494361570186 26 20.631678369933265 28.277659713482024 31.143183334364966 19.947478582219745 27 21.356226344156276 27.68137770716845 31.41106319763963 19.55133275103564 28 19.6289342347485 27.772161126814808 32.92939296611899 19.669511672317704 29 21.227157997537844 26.911438023122265 31.950949443263806 19.910454536076095 30 21.762344596437895 26.53340302565549 31.910601256754312 19.79365112115231 31 22.039509127630943 26.318365531644673 30.46907059327882 21.17305474744557 32 22.88510166138243 26.98307897928258 31.159230908544878 18.972588450790116 33 22.049252297668744 27.565032794364093 30.191791436555913 20.193923471411246 34 22.025295561928733 27.52342372702618 30.850658982171147 19.60062172887394 35 21.8962272153103 27.402035290908135 30.539565294140576 20.16217219964099 36 21.505124907439885 29.813641813559283 29.17976263345277 19.501470645548057 37 22.1822179123023 28.46679183774527 30.267673537320928 19.083316712631504 38 21.396574530665767 28.81479494638964 28.928388846477443 20.86024167646715 39 22.72645992806102 27.504854391189422 29.5745329582786 20.19415272247096 40 23.273911458655718 26.856761645380704 30.042434371152883 19.826892524810695 41 20.961914521449877 28.28671513034069 29.918065671258564 20.83330467695087 42 21.88877655586963 27.590250410932526 29.47457949624372 21.046393536954124 43 21.762115345378184 27.440205592350353 29.433658182084947 21.36402088018652 44 21.220051214686737 27.84540684039312 29.119240353688536 21.815301591231606 45 21.49698649482007 26.418318993679545 29.33817511571447 22.746519395785906 46 21.38797761592653 28.724584654392565 28.440313340348418 21.44712438933249 47 20.901506867215495 27.01654963400068 30.76377283053991 21.318170668243912 48 21.245498082314885 26.485374928645605 30.75861468169637 21.51051230734314 49 20.831814545062734 26.48560417970532 30.692361125439305 21.99022014979264 50 20.452977168886964 26.56251791023904 30.442133593762538 22.54237132711146 51 20.055685082404292 26.271942192052784 30.332207710630144 23.34016501491278 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 369.0 1 907.0 2 1445.0 3 9468.5 4 17492.0 5 13551.0 6 9610.0 7 7619.0 8 5628.0 9 5368.5 10 5109.0 11 4856.0 12 4603.0 13 4607.5 14 4612.0 15 4424.0 16 4236.0 17 4289.5 18 4343.0 19 4298.5 20 4254.0 21 4336.5 22 4419.0 23 5017.0 24 5615.0 25 6870.5 26 9845.0 27 11564.0 28 13977.5 29 16391.0 30 18157.0 31 19923.0 32 22824.0 33 25725.0 34 27752.0 35 29779.0 36 31823.0 37 33867.0 38 36916.0 39 39965.0 40 43425.0 41 46885.0 42 49315.5 43 51746.0 44 55817.5 45 59889.0 46 65829.5 47 71770.0 48 69437.5 49 67105.0 50 64405.5 51 61706.0 52 56256.5 53 50807.0 54 46685.5 55 42564.0 56 39330.5 57 36097.0 58 34762.5 59 33428.0 60 31583.0 61 29738.0 62 26495.5 63 23253.0 64 18987.5 65 14722.0 66 11818.5 67 8915.0 68 7446.0 69 5977.0 70 5004.0 71 4031.0 72 3304.0 73 2577.0 74 2122.0 75 1356.0 76 1045.0 77 839.0 78 633.0 79 473.5 80 314.0 81 251.0 82 188.0 83 149.0 84 110.0 85 92.5 86 75.0 87 55.0 88 35.0 89 36.5 90 38.0 91 23.0 92 8.0 93 6.0 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 872406.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.53405061382354 #Duplication Level Percentage of deduplicated Percentage of total 1 74.22609050612498 28.602319284292665 2 8.735482231881809 6.732270289189797 3 3.9886085770187756 4.610917343567165 4 2.4561173519082007 3.7857660140768337 5 1.746820677365455 3.3656038197436975 6 1.2838950196254633 2.9684205401450137 7 0.9656953328092135 2.6048506982402375 8 0.7544746794198617 2.3258372386890587 9 0.623892236850119 2.1636985529118657 >10 5.122764596175087 37.554206444607324 >50 0.07559659818461524 1.8265935486954685 >100 0.017235955592277863 1.1546091708393031 >500 0.0012095407432857253 0.25121983775255846 >1k 0.001814311114928588 1.1724369236856416 >5k 3.0238518582143133E-4 0.8812502935633577 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7563 0.8669128823047983 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2493 0.2857614459322838 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTC 1843 0.2112548515255512 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCG 1642 0.1882151200243923 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGC 1561 0.17893045210601485 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1501 0.17205292031462416 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1022 0.11714729151335501 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.438765895695353E-4 0.0 0.0 0.05249849267428239 0.0 2 3.438765895695353E-4 0.0 0.0 0.26180471019227286 0.0 3 3.438765895695353E-4 0.0 0.0 0.3911023078704181 0.0 4 3.438765895695353E-4 0.0 0.0 0.6116418273143468 0.0 5 3.438765895695353E-4 0.0 0.0 1.3413479503809007 0.0 6 3.438765895695353E-4 0.0 0.0 1.7762372106565063 0.0 7 3.438765895695353E-4 0.0 0.0 2.163442250511803 0.0 8 3.438765895695353E-4 0.0 0.0 2.7786374692517017 0.0 9 3.438765895695353E-4 0.0 0.0 3.0601577705792944 0.0 10 3.438765895695353E-4 0.0 0.0 3.891078236509148 0.0 11 3.438765895695353E-4 0.0 0.0 4.489194251300427 0.0 12 3.438765895695353E-4 0.0 0.0 5.237813586793305 0.0 13 3.438765895695353E-4 0.0 0.0 5.493887020492752 0.0 14 3.438765895695353E-4 0.0 0.0 5.629603647842862 0.0 15 3.438765895695353E-4 0.0 0.0 5.8303129506216145 0.0 16 3.438765895695353E-4 0.0 0.0 6.157339587302243 0.0 17 3.438765895695353E-4 0.0 0.0 6.549358899411512 0.0 18 3.438765895695353E-4 0.0 0.0 6.981841023560132 0.0 19 3.438765895695353E-4 0.0 0.0 7.2773456395302185 0.0 20 3.438765895695353E-4 0.0 0.0 7.549695898469291 0.0 21 3.438765895695353E-4 0.0 0.0 7.890936100852127 0.0 22 3.438765895695353E-4 0.0 0.0 8.273899996102733 0.0 23 3.438765895695353E-4 0.0 0.0 8.666950937980712 0.0 24 3.438765895695353E-4 0.0 0.0 8.969447711272045 0.0 25 3.438765895695353E-4 0.0 0.0 9.2423710978604 0.0 26 3.438765895695353E-4 0.0 0.0 9.495693518843291 0.0 27 3.438765895695353E-4 0.0 0.0 9.75268395678159 0.0 28 3.438765895695353E-4 0.0 0.0 10.03661139423617 0.0 29 3.438765895695353E-4 0.0 0.0 10.33005275066884 0.0 30 3.438765895695353E-4 0.0 0.0 10.66487392337971 0.0 31 3.438765895695353E-4 0.0 0.0 10.995224700426178 0.0 32 3.438765895695353E-4 0.0 0.0 11.321907460517236 0.0 33 3.438765895695353E-4 0.0 0.0 11.644578327063316 0.0 34 3.438765895695353E-4 0.0 0.0 11.94810673012336 0.0 35 3.438765895695353E-4 0.0 0.0 12.27834288163997 0.0 36 3.438765895695353E-4 0.0 0.0 12.605484143850456 0.0 37 3.438765895695353E-4 0.0 0.0 12.938700559143335 0.0 38 3.438765895695353E-4 0.0 0.0 13.294842080407516 0.0 39 3.438765895695353E-4 0.0 0.0 13.640552678454757 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACCGG 35 1.2114833E-7 45.000004 2 CGTATAG 20 7.032352E-4 45.0 2 CGCATGG 55 1.8189894E-12 45.0 2 TCGCTAA 20 7.032352E-4 45.0 11 TAAGACG 20 7.032352E-4 45.0 1 TATAGCG 30 2.1648975E-6 44.999996 1 CGTTATT 655 0.0 42.59542 1 CGTTTTA 450 0.0 42.0 1 CGTTTTT 3420 0.0 41.973686 1 TACGGGT 130 0.0 41.538464 4 CGGTTTT 865 0.0 40.83815 1 ACACGTG 80 0.0 39.375 42 CACGTGA 80 0.0 39.375 43 GCTACGA 115 0.0 39.130432 10 TCTACGG 65 9.094947E-12 38.076927 2 TCGTCGA 30 1.1396964E-4 37.499996 41 ACCCCGC 30 1.1396964E-4 37.499996 17 CTACGGG 175 0.0 37.285717 3 CTCGTAA 145 0.0 37.24138 33 AGGCGAT 200 0.0 37.125 7 >>END_MODULE