##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936060.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 958741 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.717082089949216 31.0 31.0 34.0 30.0 34.0 2 31.819913824484402 33.0 31.0 34.0 30.0 34.0 3 31.290456963872412 31.0 31.0 34.0 28.0 34.0 4 35.30608579376495 37.0 35.0 37.0 33.0 37.0 5 30.951881686503445 37.0 35.0 37.0 0.0 37.0 6 33.25511895287674 37.0 35.0 37.0 17.0 37.0 7 29.62541291130764 35.0 32.0 37.0 0.0 37.0 8 32.65136778337424 35.0 33.0 37.0 17.0 37.0 9 36.47393613082156 39.0 35.0 39.0 32.0 39.0 10 36.82972877972257 38.0 37.0 39.0 33.0 39.0 11 36.97395751303011 39.0 37.0 39.0 33.0 39.0 12 37.02254310601091 39.0 37.0 39.0 33.0 39.0 13 36.91689517815552 39.0 37.0 39.0 33.0 39.0 14 38.145657690658894 40.0 37.0 41.0 33.0 41.0 15 38.21928132832538 40.0 37.0 41.0 33.0 41.0 16 38.236429859576255 40.0 37.0 41.0 33.0 41.0 17 38.19226151796992 40.0 37.0 41.0 33.0 41.0 18 38.025694113425835 40.0 37.0 41.0 33.0 41.0 19 37.8625708090089 40.0 37.0 41.0 33.0 41.0 20 37.662170492343606 39.0 35.0 41.0 33.0 41.0 21 37.54271382990818 39.0 35.0 41.0 33.0 41.0 22 37.49866648031116 39.0 35.0 41.0 33.0 41.0 23 37.41090972431554 39.0 35.0 41.0 33.0 41.0 24 37.341512462698475 39.0 35.0 41.0 33.0 41.0 25 37.19577550141279 39.0 35.0 41.0 32.0 41.0 26 37.04118317668693 39.0 35.0 41.0 32.0 41.0 27 36.9853182454907 39.0 35.0 41.0 32.0 41.0 28 36.85047578021593 39.0 35.0 40.0 32.0 41.0 29 36.78047877372512 39.0 35.0 40.0 31.0 41.0 30 36.57437201496546 39.0 35.0 40.0 31.0 41.0 31 36.38537832428153 39.0 35.0 40.0 30.0 41.0 32 36.16116552854212 38.0 35.0 40.0 30.0 41.0 33 35.824574102912045 38.0 35.0 40.0 28.0 41.0 34 35.44420755970591 38.0 34.0 40.0 25.0 41.0 35 35.09235445234949 38.0 34.0 40.0 24.0 41.0 36 34.88403437424706 38.0 34.0 40.0 23.0 41.0 37 34.689426028510304 38.0 34.0 40.0 22.0 41.0 38 34.47706106237242 38.0 34.0 40.0 21.0 41.0 39 34.363980470220845 38.0 33.0 40.0 20.0 41.0 40 34.20888331676647 38.0 33.0 40.0 18.0 41.0 41 34.05354000715522 38.0 33.0 40.0 18.0 41.0 42 33.97424747663863 38.0 33.0 40.0 18.0 41.0 43 33.81325822093767 38.0 33.0 40.0 18.0 41.0 44 33.596746149377154 38.0 33.0 40.0 15.0 41.0 45 33.439151971178866 37.0 33.0 40.0 15.0 41.0 46 33.36841128104462 37.0 32.0 40.0 15.0 41.0 47 33.199380228862644 37.0 32.0 40.0 15.0 41.0 48 33.098399880676844 37.0 32.0 40.0 14.0 41.0 49 32.937846613423226 37.0 31.0 40.0 13.0 41.0 50 32.76668777073266 36.0 31.0 40.0 13.0 41.0 51 30.93058500679537 35.0 27.0 39.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 17.0 9 54.0 10 59.0 11 48.0 12 26.0 13 46.0 14 44.0 15 76.0 16 163.0 17 289.0 18 580.0 19 993.0 20 1826.0 21 3048.0 22 4820.0 23 7455.0 24 11708.0 25 16812.0 26 21448.0 27 22772.0 28 22611.0 29 22843.0 30 24727.0 31 28824.0 32 35558.0 33 47231.0 34 65292.0 35 76448.0 36 90361.0 37 137873.0 38 164346.0 39 150322.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.36714920922334 19.710015530784645 22.492414531140316 18.430420728851693 2 38.27321455951086 22.019919874084867 23.70713258325241 15.999732983151862 3 31.66381744391864 21.968706877039786 30.50771793424919 15.859757744792388 4 26.272684697952837 24.194438331102976 31.939908692754354 17.592968278189836 5 20.504807867818318 37.719676116907486 25.89187277898828 15.883643236285922 6 23.34812008665531 32.850477866285054 30.432723749166872 13.368678297892759 7 64.84952661876356 18.572482036337238 12.691123045744368 3.886868299154829 8 78.22529755168497 4.37344392281127 13.91303803634141 3.488220489162349 9 72.39932369638933 6.545563400334396 16.0036965144914 5.051416388784875 10 36.90496181971982 26.76364106677403 22.81158310742943 13.51981400607672 11 27.351599649957603 24.658797318566744 30.942350436666423 17.047252594809233 12 24.536762274691494 22.516717236459062 34.36684151402725 18.57967897482219 13 22.765480979743224 21.661637501681895 36.11590617278285 19.45697534579203 14 19.742245298782464 24.302392408377234 35.888003120759414 20.067359172080884 15 19.78031606033329 24.460099234308327 37.27158846862709 18.4879962367313 16 23.899989673957826 23.826560040720068 34.672450640996885 17.600999644325213 17 23.102381143603957 23.908333950462115 33.57955902584744 19.40972588008649 18 23.14817036092125 24.455092668405754 34.10055479008408 18.296182180588918 19 22.817737011351344 26.1423053775733 32.31842593568023 18.721531675395127 20 23.67344256686634 25.760659030958312 31.980482737256466 18.585415664918887 21 23.98687445305875 25.278151242097707 33.14273615084783 17.59223815399571 22 22.90138838330686 22.9457173522359 33.64704336207589 20.505850902381354 23 21.66268053624493 24.638562448043842 33.85262547445035 19.846131541260885 24 21.732876762337273 24.462915427628527 34.044961047874246 19.759246762159957 25 22.409910497204148 25.109179642885827 32.22298827316241 20.25792158674762 26 21.007967741027034 25.301515216309724 32.44327717287568 21.247239869787567 27 21.095582644322086 24.460307841220935 33.429779262595424 21.01433025186156 28 20.29724398977409 25.29129347759197 33.19739116195093 21.214071370683012 29 21.78023053149912 24.95481052755645 32.50721519158981 20.757743749354624 30 22.753903296093522 23.34061023780145 33.54096674701509 20.364519719089934 31 22.966786650409237 23.86358776770786 31.95805749415118 21.21156808773172 32 23.080164507411283 24.039443395035782 32.10835877468472 20.772033322868218 33 22.875521126143557 23.84314429027235 31.92290722937686 21.358427354207237 34 21.470657873189943 24.31480451967737 33.44678072597292 20.76775688115977 35 21.46878041097648 24.770819230636846 33.14273615084783 20.617664207538844 36 22.11076818452533 25.97990489610854 31.54845782124682 20.360869098119306 37 21.348727132770996 26.348721917598183 32.112843823305774 20.189707126325047 38 21.624818381606712 26.042069756065505 32.205152382134486 20.127959480193294 39 21.82445519697186 25.262297116739557 31.337139018775666 21.576108667512916 40 22.92725564047016 24.24794600418674 32.564269182187886 20.260529173155213 41 20.61265764163627 25.41843939082609 32.13213996272194 21.83676300481569 42 20.959153723476934 26.064703606083395 31.20477793272636 21.771364737713313 43 20.737195968462807 25.361594007140614 31.66392174737494 22.237288277021637 44 21.664557998458395 24.934888567402457 31.28592602173058 22.114627412408566 45 21.595717717297997 24.989647881961865 30.880394183622062 22.534240217118075 46 22.141850614503813 25.41916951502022 30.365552323307337 22.07342754716863 47 20.86142138492043 25.556537166972106 31.81151113804458 21.770530310062885 48 20.872373247832314 25.19679454618088 31.570674457439495 22.360157748547312 49 21.467215859131926 24.955436348294274 31.69677733611059 21.880570456463218 50 20.477793272635676 24.792931563373216 32.329899315873625 22.39937584811748 51 20.567702851969404 24.036940112084494 31.957953190694884 23.43740384525122 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 320.0 1 832.0 2 1344.0 3 13781.5 4 26219.0 5 20087.0 6 13955.0 7 11034.0 8 8113.0 9 7707.5 10 7302.0 11 7087.5 12 6873.0 13 6577.0 14 6281.0 15 5922.0 16 5563.0 17 5235.5 18 4908.0 19 4972.0 20 5036.0 21 5232.0 22 5428.0 23 5741.5 24 6055.0 25 6664.0 26 8418.5 27 9564.0 28 11300.0 29 13036.0 30 15614.0 31 18192.0 32 21096.5 33 24001.0 34 26266.0 35 28531.0 36 30852.0 37 33173.0 38 35428.5 39 37684.0 40 40116.5 41 42549.0 42 45754.0 43 48959.0 44 53396.5 45 57834.0 46 64004.0 47 70174.0 48 72952.5 49 75731.0 50 73462.5 51 71194.0 52 65412.5 53 59631.0 54 55452.0 55 51273.0 56 47740.5 57 44208.0 58 42234.5 59 40261.0 60 37892.5 61 35524.0 62 32242.5 63 28961.0 64 25435.0 65 21909.0 66 18190.5 67 14472.0 68 11867.5 69 9263.0 70 8063.0 71 6863.0 72 5676.5 73 4490.0 74 3698.5 75 2302.5 76 1698.0 77 1298.5 78 899.0 79 675.0 80 451.0 81 367.0 82 283.0 83 211.5 84 140.0 85 119.0 86 98.0 87 78.5 88 59.0 89 41.5 90 24.0 91 20.0 92 16.0 93 14.5 94 13.0 95 8.0 96 3.0 97 1.5 98 0.0 99 1.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 958741.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.237279762259504 #Duplication Level Percentage of deduplicated Percentage of total 1 73.42013914015786 31.010669570468668 2 9.256263789787605 7.819188064850631 3 4.447994607621521 5.636135778693956 4 2.7077563885169007 4.574730564393351 5 1.8334690241914031 3.8720372055104617 6 1.3977970310624612 3.542348655110455 7 1.0572407350356474 3.1258480891230254 8 0.8218286215820902 2.7769444325115877 9 0.6734108001101304 2.559873632326074 >10 4.341184741083275 30.885801594361244 >50 0.0286937125420142 0.824008983814001 >100 0.012225421183937882 0.9477997132116041 >500 7.484951719351065E-4 0.17893750387391572 >1k 9.97993562580142E-4 0.9319925113432924 >5k 0.0 0.0 >10k+ 2.494983906450355E-4 1.3136837004076756 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12466 1.3002468862810705 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3702 0.38613139523604395 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2439 0.2543961299245573 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1659 0.1730394340077247 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTT 1044 0.10889280838099133 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0430345630363154E-4 0.0 0.0 0.07301241941254208 0.0 2 1.0430345630363154E-4 0.0 0.0 0.22383521722759328 0.0 3 1.0430345630363154E-4 0.0 0.0 0.41272877659346996 0.0 4 1.0430345630363154E-4 0.0 0.0 0.5665763746413265 0.0 5 1.0430345630363154E-4 0.0 0.0 1.040635583541332 0.0 6 1.0430345630363154E-4 0.0 0.0 1.793289324228337 0.0 7 1.0430345630363154E-4 0.0 0.0 2.3722778101697957 0.0 8 1.0430345630363154E-4 0.0 0.0 3.2548936574111256 0.0 9 1.0430345630363154E-4 0.0 0.0 3.80791058273298 0.0 10 1.0430345630363154E-4 0.0 0.0 4.513106250801833 0.0 11 1.0430345630363154E-4 0.0 0.0 5.139761416274051 0.0 12 1.0430345630363154E-4 0.0 0.0 5.6186185841640235 0.0 13 1.0430345630363154E-4 0.0 0.0 5.902532592222508 0.0 14 1.0430345630363154E-4 0.0 0.0 6.087879834074061 0.0 15 1.0430345630363154E-4 0.0 0.0 6.2501760120825125 0.0 16 1.0430345630363154E-4 0.0 0.0 6.5142723634433075 0.0 17 1.0430345630363154E-4 0.0 0.0 6.80559191689935 0.0 18 1.0430345630363154E-4 0.0 0.0 7.147602950118958 0.0 19 1.0430345630363154E-4 0.0 0.0 7.366431601443977 0.0 20 1.0430345630363154E-4 0.0 0.0 7.589849604846356 0.0 21 1.0430345630363154E-4 0.0 0.0 7.847479141916326 0.0 22 1.0430345630363154E-4 0.0 0.0 8.135878198595867 0.0 23 1.0430345630363154E-4 0.0 0.0 8.441591629021811 0.0 24 1.0430345630363154E-4 0.0 0.0 8.68858221354881 0.0 25 1.0430345630363154E-4 0.0 0.0 8.924516631707625 0.0 26 1.0430345630363154E-4 0.0 0.0 9.148247545478915 0.0 27 2.0860691260726308E-4 0.0 0.0 9.386163729307498 0.0 28 2.0860691260726308E-4 0.0 0.0 9.633571527659711 0.0 29 2.0860691260726308E-4 0.0 0.0 9.897354968651596 0.0 30 2.0860691260726308E-4 0.0 0.0 10.209117999543151 0.0 31 2.0860691260726308E-4 0.0 0.0 10.480306985932593 0.0 32 2.0860691260726308E-4 0.0 0.0 10.736893488439527 0.0 33 2.0860691260726308E-4 0.0 0.0 11.004223246945735 0.0 34 2.0860691260726308E-4 0.0 0.0 11.273326164209104 0.0 35 2.0860691260726308E-4 0.0 0.0 11.568087731723166 0.0 36 2.0860691260726308E-4 0.0 0.0 11.850437187937096 0.0 37 3.129103689108946E-4 0.0 0.0 12.147180521120928 0.0 38 3.129103689108946E-4 0.0 0.0 12.474589070458027 0.0 39 3.129103689108946E-4 0.0 0.0 12.914436745690441 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATGT 20 7.0326997E-4 45.000004 36 CGGTCTA 35 1.211647E-7 45.0 31 CGTTTTA 625 0.0 43.56 1 CGTTATT 1075 0.0 42.90698 1 CGTTTTT 5115 0.0 42.140762 1 CTACGGG 240 0.0 40.312504 3 GCGATAA 90 0.0 40.0 9 CGGTTTT 1455 0.0 39.43299 1 CGGTTTA 115 0.0 39.130436 1 CGGGCTA 70 0.0 38.571426 6 TATTACG 30 1.1397805E-4 37.500004 1 TATCGCG 30 1.1397805E-4 37.500004 1 ACGGGAT 385 0.0 37.402596 5 GACCGAT 390 0.0 36.923077 9 TGTACGG 130 0.0 36.346153 2 CTTCGCA 25 0.0021069343 36.0 24 TTCGTCG 25 0.0021069343 36.0 37 TACGGGT 100 0.0 36.0 4 ATAACGG 75 1.8189894E-12 36.0 2 CGGTATG 25 0.0021069343 36.0 1 >>END_MODULE