SRR2936059.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936059.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	518645
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCGCAGGATATCGTATGCCGTCTTC	1764	0.3401170357373541	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1679	0.32372817630556544	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCAGGATATCGTATGCCG	1625	0.3133164303136057	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAGGATATCGTATGC	1616	0.31158113931494563	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGCGA	20	7.029703E-4	45.0	22
TACGAAT	100	0.0	45.0	12
GAAACGC	20	7.029703E-4	45.0	27
GCGATAC	25	3.8878352E-5	45.0	9
TTACGTC	20	7.029703E-4	45.0	39
ACGACCG	20	7.029703E-4	45.0	1
CGAATAT	105	0.0	42.857143	14
GCTACGA	115	0.0	41.08696	10
GCCGATA	45	1.9248546E-8	40.0	9
GCGATCA	45	1.9248546E-8	40.0	9
TCGACAC	45	1.9248546E-8	40.0	34
GCGTAAG	45	1.9248546E-8	40.0	1
ACGGGAC	170	0.0	39.705883	5
CGTTATT	125	0.0	39.600002	1
TACGGCT	215	0.0	38.720932	7
TCCCCGT	35	6.2416584E-6	38.571426	36
CGTTTTT	725	0.0	38.48276	1
ACACGAC	125	0.0	37.800003	26
CACGACC	125	0.0	37.800003	27
CATACGA	150	0.0	37.5	18