##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936052.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 654003 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.775053019634466 31.0 31.0 34.0 30.0 34.0 2 31.88286598073709 33.0 31.0 34.0 30.0 34.0 3 31.589900963757046 33.0 31.0 34.0 30.0 34.0 4 35.464441294611795 37.0 35.0 37.0 33.0 37.0 5 31.053076209130538 37.0 35.0 37.0 0.0 37.0 6 33.3190077109738 37.0 35.0 37.0 17.0 37.0 7 29.62589315339532 35.0 32.0 37.0 0.0 37.0 8 32.6729326929693 35.0 33.0 37.0 17.0 37.0 9 36.50184020562597 39.0 35.0 39.0 32.0 39.0 10 36.74563725242851 38.0 35.0 39.0 33.0 39.0 11 36.896613624096524 39.0 37.0 39.0 33.0 39.0 12 36.987160609355 39.0 37.0 39.0 33.0 39.0 13 36.86462447419966 39.0 37.0 39.0 33.0 39.0 14 38.14396570046315 40.0 37.0 41.0 33.0 41.0 15 38.20710149647632 40.0 37.0 41.0 33.0 41.0 16 38.23969614818281 40.0 37.0 41.0 34.0 41.0 17 38.21249749618885 40.0 37.0 41.0 34.0 41.0 18 38.09992767617274 40.0 37.0 41.0 33.0 41.0 19 37.96279833578745 40.0 37.0 41.0 33.0 41.0 20 37.83403745854377 40.0 36.0 41.0 33.0 41.0 21 37.74592624192855 39.0 36.0 41.0 33.0 41.0 22 37.69963746343671 39.0 36.0 41.0 33.0 41.0 23 37.64347411250407 39.0 36.0 41.0 33.0 41.0 24 37.597751080652536 39.0 36.0 41.0 33.0 41.0 25 37.47047796416836 39.0 35.0 41.0 33.0 41.0 26 37.333877673344006 39.0 35.0 41.0 32.0 41.0 27 37.28457973434373 39.0 35.0 41.0 32.0 41.0 28 37.12487863205521 39.0 35.0 41.0 32.0 41.0 29 37.0899445415388 39.0 35.0 41.0 32.0 41.0 30 36.97149554359842 39.0 35.0 41.0 31.0 41.0 31 36.801779196731516 39.0 35.0 41.0 31.0 41.0 32 36.662669743105155 39.0 35.0 41.0 30.0 41.0 33 36.431788539196305 39.0 35.0 41.0 30.0 41.0 34 36.209443993376176 39.0 35.0 40.0 30.0 41.0 35 36.035450907717546 39.0 35.0 40.0 29.0 41.0 36 35.83205428721275 39.0 35.0 40.0 27.0 41.0 37 35.67986232479056 39.0 35.0 40.0 27.0 41.0 38 35.53200061773417 39.0 35.0 40.0 26.0 41.0 39 35.559592234286384 39.0 35.0 40.0 26.0 41.0 40 35.43598270955944 38.0 35.0 40.0 25.0 41.0 41 35.34227365929514 38.0 35.0 40.0 25.0 41.0 42 35.26894830757657 38.0 34.0 40.0 24.0 41.0 43 35.07911584503435 38.0 34.0 40.0 24.0 41.0 44 34.93243303165276 38.0 34.0 40.0 23.0 41.0 45 34.83208945524715 38.0 34.0 40.0 23.0 41.0 46 34.704635911456066 38.0 34.0 40.0 23.0 41.0 47 34.54461829685796 38.0 34.0 40.0 23.0 41.0 48 34.43968911457593 38.0 33.0 40.0 22.0 41.0 49 34.25467925988107 38.0 33.0 40.0 21.0 41.0 50 34.070961448189074 37.0 33.0 40.0 20.0 41.0 51 32.159464100317585 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 26.0 10 27.0 11 14.0 12 19.0 13 13.0 14 21.0 15 36.0 16 55.0 17 161.0 18 291.0 19 607.0 20 1087.0 21 1651.0 22 2658.0 23 3892.0 24 5725.0 25 7990.0 26 9937.0 27 10749.0 28 11305.0 29 12613.0 30 14904.0 31 17992.0 32 22913.0 33 30986.0 34 43659.0 35 53771.0 36 63725.0 37 98714.0 38 123028.0 39 115409.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.34262381059414 20.906020308775343 23.497139921376508 14.25421595925401 2 33.86742874268161 24.766400154127734 24.751262608887114 16.614908494303542 3 31.28945891685512 24.15355892862877 28.97846034345408 15.578521811062028 4 27.337030564079985 25.70829185798842 28.869898150314295 18.084779427617303 5 21.531552607556844 38.148143051331566 23.919615047637397 16.400689293474187 6 24.23643316620872 35.2385233706879 27.106909295523106 13.41813416758027 7 68.4125302177513 19.020249142588032 9.019989204942485 3.547231434718189 8 82.3191942544606 4.8518126063641915 9.623503256101271 3.205489883073931 9 76.35010848574089 7.5322284454352655 11.398265757190716 4.719397311633127 10 37.37811600252598 30.01912835262224 19.632937463589617 12.969818181262166 11 27.12434040822443 27.009814939686823 28.691764410866615 17.174080241222136 12 25.54330790531542 23.80784186005263 31.97294202014364 18.675908214488313 13 22.841179627616388 24.896827690392858 33.60504462517756 18.656948056813192 14 19.792569758854317 28.267148621642406 31.742667847089383 20.197613772413888 15 19.247618130192063 27.59727401862071 35.078738170925824 18.076369680261408 16 21.57818847925774 26.074039415721334 33.64158880005137 18.70618330496955 17 21.865954743326867 25.68994331830282 31.185789667631493 21.25831227073882 18 22.51426981221799 26.322203414969042 32.07385898841443 19.089667784398543 19 23.204480713391224 27.930300013914312 29.896804754718246 18.968414517976218 20 24.592241931611937 26.739938501811157 30.350931111936795 18.316888454640115 21 23.873743698423404 27.463329678915844 30.47264309185126 18.19028353080949 22 21.849746866604587 25.145297498635326 30.652458780770118 22.35249685398997 23 20.809537570928573 27.719138903032555 30.623406926267922 20.84791659977095 24 20.640883910318454 26.35324302793718 32.164684259858134 20.84118880188623 25 20.731556277264783 27.35201520482322 30.374784213528073 21.541644304383926 26 20.51443189098521 28.91148817360165 29.81194275867236 20.76213717674078 27 21.395620509386042 28.116231882728364 30.224020379111412 20.26412722877418 28 19.59348810326558 27.500026758287042 32.6201867575531 20.286298380894277 29 21.611521659686574 26.401407944611876 31.611322883839982 20.375747511861565 30 22.48858185665815 26.24819763823713 31.03334388374365 20.229876621361065 31 23.049588457545305 26.61960266237311 29.321425131077376 21.00938374900421 32 23.08490939644008 27.81439840490028 29.75139257770989 19.34929962094975 33 22.747143361727698 27.060426328319593 29.74818158326491 20.444248726687796 34 21.889502035923382 26.577248116598856 30.604905482084945 20.92834436539282 35 22.4110592764865 26.402172467098772 29.877232979053613 21.309535277361114 36 22.571456094238098 28.486719479880062 29.23059985963367 19.711224566248166 37 21.24348053449296 28.768981182043508 30.741296293747887 19.246241989715642 38 21.268709776560655 28.592682296564387 29.459803701206265 20.67880422566869 39 22.296380903451514 27.50400227521892 28.838705632848775 21.360911188480785 40 22.49714450851143 26.717002827204155 30.030749094423115 20.755103569861298 41 20.305717252061534 28.1503295856441 29.25521748371185 22.288735678582512 42 21.99424161662867 27.744979763089773 29.387938587437674 20.872840032843886 43 21.99072481318893 27.18198540373668 29.58824347900545 21.239046304068943 44 21.177884505116946 27.074034828586413 29.539161135346475 22.208919530950162 45 21.84240745073035 26.81394427854307 28.858736122005556 22.48491214872103 46 22.111519366119115 27.674337885300222 28.47051160315778 21.74363114542288 47 21.33782260937641 26.663180444126404 30.57004325668231 21.42895368981488 48 21.43292920674676 26.46639235599837 29.89741637270777 22.203262064547104 49 21.437516341668157 26.463792979542905 29.934725070068485 22.16396560872045 50 20.445930676158977 26.28718828506903 30.448025467773082 22.81885557099891 51 20.65510402857479 26.16853439510216 28.698033495259196 24.47832808106385 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 301.0 1 665.0 2 1029.0 3 5256.0 4 9483.0 5 7474.5 6 5466.0 7 4381.0 8 3296.0 9 3120.0 10 2944.0 11 2929.0 12 2914.0 13 2868.5 14 2823.0 15 2669.5 16 2516.0 17 2599.5 18 2683.0 19 2750.0 20 2817.0 21 2971.5 22 3126.0 23 3600.5 24 4075.0 25 4939.0 26 7137.5 27 8472.0 28 9821.5 29 11171.0 30 12699.0 31 14227.0 32 15814.0 33 17401.0 34 19442.0 35 21483.0 36 23547.0 37 25611.0 38 27400.5 39 29190.0 40 32532.0 41 35874.0 42 38870.0 43 41866.0 44 45046.5 45 48227.0 46 52972.5 47 57718.0 48 56436.0 49 55154.0 50 52815.5 51 50477.0 52 45950.5 53 41424.0 54 36548.5 55 31673.0 56 28942.5 57 26212.0 58 24690.0 59 23168.0 60 21387.0 61 19606.0 62 17238.5 63 14871.0 64 12807.5 65 10744.0 66 8715.0 67 6686.0 68 5496.5 69 4307.0 70 3761.5 71 3216.0 72 2729.0 73 2242.0 74 1826.5 75 1158.0 76 905.0 77 751.5 78 598.0 79 457.0 80 316.0 81 282.5 82 249.0 83 185.5 84 122.0 85 89.5 86 57.0 87 37.5 88 18.0 89 16.5 90 15.0 91 12.0 92 9.0 93 6.5 94 4.0 95 3.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 654003.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.416441037130184 #Duplication Level Percentage of deduplicated Percentage of total 1 75.99906851680876 31.47610940103227 2 8.511116844735914 7.05000337920261 3 3.7121333246028385 4.612300528811384 4 2.2679631193714513 3.7572384323133425 5 1.540683459136356 3.190481282110133 6 1.117411308872851 2.776751975289294 7 0.8766231336464709 2.541462722851735 8 0.6624784010863092 2.1949998109570723 9 0.5609578724368434 2.0909590783285066 >10 4.676903779934552 36.32190955082823 >50 0.055995179734426324 1.4755604908943327 >100 0.016379542127218386 1.1936373930096433 >500 0.0015236783374156632 0.419334944570398 >1k 7.618391687078316E-4 0.8992510098010793 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4297 0.6570306252417802 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1403 0.21452500982411396 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 854 0.13058044076250414 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0580899475996285E-4 0.0 0.0 0.08012195662711027 0.0 2 3.0580899475996285E-4 0.0 0.0 0.3203349220110611 0.0 3 3.0580899475996285E-4 0.0 0.0 0.49464604902424 0.0 4 3.0580899475996285E-4 0.0 0.0 0.6857766707492168 0.0 5 3.0580899475996285E-4 0.0 0.0 1.300605654714122 0.0 6 3.0580899475996285E-4 0.0 0.0 1.8350068730571572 0.0 7 3.0580899475996285E-4 0.0 0.0 2.30350625302942 0.0 8 3.0580899475996285E-4 0.0 0.0 3.113900089143322 0.0 9 3.0580899475996285E-4 0.0 0.0 3.4970787595775557 0.0 10 3.0580899475996285E-4 0.0 0.0 4.358389793318991 0.0 11 3.0580899475996285E-4 0.0 0.0 5.280098103525519 0.0 12 3.0580899475996285E-4 0.0 0.0 6.09339712508964 0.0 13 3.0580899475996285E-4 0.0 0.0 6.456851115361856 0.0 14 3.0580899475996285E-4 0.0 0.0 6.6277983434326755 0.0 15 3.0580899475996285E-4 0.0 0.0 6.858531229979067 0.0 16 3.0580899475996285E-4 0.0 0.0 7.33192355386749 0.0 17 3.0580899475996285E-4 0.0 0.0 7.90745608200574 0.0 18 3.0580899475996285E-4 0.0 0.0 8.56051119031564 0.0 19 3.0580899475996285E-4 0.0 0.0 8.943384051755114 0.0 20 3.0580899475996285E-4 0.0 0.0 9.323657536739129 0.0 21 3.0580899475996285E-4 0.0 0.0 9.80607122597297 0.0 22 3.0580899475996285E-4 0.0 0.0 10.30270503346315 0.0 23 3.0580899475996285E-4 0.0 0.0 10.837412060800945 0.0 24 3.0580899475996285E-4 0.0 0.0 11.251477439705933 0.0 25 3.0580899475996285E-4 0.0 0.0 11.61798951992575 0.0 26 3.0580899475996285E-4 0.0 0.0 11.966764678449488 0.0 27 3.0580899475996285E-4 0.0 0.0 12.330524477716462 0.0 28 3.0580899475996285E-4 0.0 0.0 12.6831222486747 0.0 29 3.0580899475996285E-4 0.0 0.0 13.077615851915052 0.0 30 3.0580899475996285E-4 0.0 0.0 13.5080420120397 0.0 31 3.0580899475996285E-4 0.0 0.0 13.928223570839888 0.0 32 3.0580899475996285E-4 0.0 0.0 14.33433791588112 0.0 33 3.0580899475996285E-4 0.0 0.0 14.733571558540252 0.0 34 3.0580899475996285E-4 0.0 0.0 15.131276156225583 0.0 35 3.0580899475996285E-4 0.0 0.0 15.519347770575976 0.0 36 3.0580899475996285E-4 0.0 0.0 15.923780166146027 0.0 37 3.0580899475996285E-4 0.0 0.0 16.32897708420298 0.0 38 3.0580899475996285E-4 0.0 0.0 16.72836363135949 0.0 39 3.0580899475996285E-4 0.0 0.0 17.14319353275138 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACGG 70 0.0 45.000004 2 CGACGGT 20 7.0310547E-4 45.0 28 CACGCGA 20 7.0310547E-4 45.0 1 CGTTCAA 20 7.0310547E-4 45.0 9 CCGTACA 20 7.0310547E-4 45.0 28 GTCAACG 20 7.0310547E-4 45.0 1 CGTACAT 20 7.0310547E-4 45.0 29 ACCGTAC 20 7.0310547E-4 45.0 27 CGCACGA 20 7.0310547E-4 45.0 39 TTTGACG 20 7.0310547E-4 45.0 1 TATCGAG 20 7.0310547E-4 45.0 1 TGCCGTA 20 7.0310547E-4 45.0 45 CGTTTTA 235 0.0 42.12766 1 CGTTTTT 1855 0.0 41.48248 1 TACGGGT 60 3.6379788E-12 41.249996 4 CGGTTTT 535 0.0 39.95327 1 GCTACGA 80 0.0 39.375 10 CGTTATT 390 0.0 39.230766 1 AGGCGAT 115 0.0 39.130432 7 CGTTGAT 35 6.2441595E-6 38.57143 25 >>END_MODULE