##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936048.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 560519 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.86773508123721 31.0 31.0 34.0 30.0 34.0 2 32.010492061821274 33.0 31.0 34.0 30.0 34.0 3 31.868434433087906 33.0 31.0 34.0 30.0 34.0 4 35.639935488359896 37.0 35.0 37.0 33.0 37.0 5 31.10137568931651 37.0 35.0 37.0 0.0 37.0 6 33.36184678842287 37.0 35.0 37.0 17.0 37.0 7 29.634883028050787 35.0 32.0 37.0 0.0 37.0 8 32.677759362305295 35.0 35.0 37.0 17.0 37.0 9 36.51942931461735 39.0 35.0 39.0 32.0 39.0 10 36.762077645896035 38.0 35.0 39.0 33.0 39.0 11 36.90763024982204 39.0 37.0 39.0 33.0 39.0 12 37.00622280422252 39.0 37.0 39.0 33.0 39.0 13 36.888922587815934 39.0 37.0 39.0 33.0 39.0 14 38.165013139608114 40.0 37.0 41.0 33.0 41.0 15 38.247734688743826 40.0 37.0 41.0 34.0 41.0 16 38.26542365200823 40.0 37.0 41.0 34.0 41.0 17 38.23237927706286 40.0 37.0 41.0 34.0 41.0 18 38.119251978969494 40.0 37.0 41.0 33.0 41.0 19 38.02670560676801 40.0 37.0 41.0 34.0 41.0 20 37.959271675001204 40.0 37.0 41.0 33.0 41.0 21 37.878867620901346 40.0 36.0 41.0 33.0 41.0 22 37.86675919995576 40.0 36.0 41.0 33.0 41.0 23 37.78163630492454 39.0 36.0 41.0 33.0 41.0 24 37.76175829900503 40.0 36.0 41.0 33.0 41.0 25 37.638413684460296 39.0 36.0 41.0 33.0 41.0 26 37.474023182086604 39.0 36.0 41.0 33.0 41.0 27 37.41033399403053 39.0 36.0 41.0 33.0 41.0 28 37.280561408266266 39.0 36.0 41.0 32.0 41.0 29 37.24145301051347 39.0 36.0 41.0 32.0 41.0 30 37.00513274304707 39.0 35.0 41.0 31.0 41.0 31 36.88866925117614 39.0 35.0 41.0 31.0 41.0 32 36.7230209859077 39.0 35.0 41.0 30.0 41.0 33 36.48500942876156 39.0 35.0 41.0 30.0 41.0 34 36.3570369603885 39.0 35.0 40.0 30.0 41.0 35 36.01796906081685 39.0 35.0 40.0 28.0 41.0 36 35.82897100722723 39.0 35.0 40.0 27.0 41.0 37 35.68457804284957 39.0 35.0 40.0 26.0 41.0 38 35.515623912837924 39.0 35.0 40.0 25.0 41.0 39 35.55409361680871 39.0 35.0 40.0 26.0 41.0 40 35.36893843027622 38.0 35.0 40.0 24.0 41.0 41 35.19086061311035 38.0 34.0 40.0 24.0 41.0 42 35.07857003955263 38.0 34.0 40.0 24.0 41.0 43 34.88225376838252 38.0 34.0 40.0 23.0 41.0 44 34.74999063368057 38.0 34.0 40.0 23.0 41.0 45 34.63092598109966 38.0 34.0 40.0 23.0 41.0 46 34.4531924876766 38.0 33.0 40.0 22.0 41.0 47 34.22375155882316 38.0 33.0 40.0 21.0 41.0 48 34.050854654347134 38.0 33.0 40.0 20.0 41.0 49 33.85138594766636 38.0 33.0 40.0 19.0 41.0 50 33.72763099912759 37.0 33.0 40.0 19.0 41.0 51 31.542258157172192 35.0 28.0 39.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 22.0 10 30.0 11 19.0 12 19.0 13 6.0 14 15.0 15 26.0 16 46.0 17 103.0 18 206.0 19 437.0 20 800.0 21 1417.0 22 2312.0 23 3389.0 24 4903.0 25 6354.0 26 7732.0 27 8824.0 28 9857.0 29 11267.0 30 13233.0 31 15955.0 32 20264.0 33 27140.0 34 38356.0 35 47283.0 36 55123.0 37 84030.0 38 103796.0 39 97527.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.948155191884666 20.856206480065794 26.580544102876086 12.615094225173456 2 32.139142473314905 25.66799698136905 25.780571220600905 16.41228932471513 3 31.023034009551864 25.01984767688517 27.52752359866481 16.42959471489816 4 27.489166290527173 26.192154057221966 27.865959940697817 18.45271971155304 5 21.91130006297735 39.30678531860651 22.035649103777036 16.74626551463911 6 24.7165573334713 34.88980748199437 26.324352965733546 14.06928221880079 7 69.53323616148606 18.98240737602115 7.6803819317454005 3.8039745307473964 8 83.50278937912898 4.731329357256399 8.073053723424184 3.6928275401904305 9 77.80449904463542 6.984776608821468 9.502086459156603 5.708637887386511 10 37.94572530101566 29.051111559108612 18.631304201998507 14.371858937877215 11 27.46311900221045 26.672780048490775 27.226195722178907 18.637905227119866 12 24.66624681768147 23.51891728915523 31.82621820134554 19.988617691817762 13 22.617074532709864 25.26801054023146 33.55693562573258 18.557979301326093 14 20.411261705669208 28.22687544936032 31.388231264239035 19.97363158073143 15 19.609683168634785 26.56680683438028 34.80452937366976 19.018980623315176 16 22.281314281942272 25.712420096374967 31.874387844123035 20.131877777559726 17 22.523411338420285 24.79737528968688 29.50872316549484 23.170490206397997 18 22.604586106804586 26.496336431057642 30.49637924851789 20.40269821361988 19 22.855960279669375 27.527345192580448 29.080013344775107 20.536681182975062 20 23.74335214328149 27.734117844354966 29.227019958288658 19.295510054074885 21 22.978525259625453 27.199791621693464 30.059997966170638 19.76168515251044 22 21.851177212547658 25.65497333721069 28.989561460004033 23.504287990237618 23 20.28994556830366 27.929829318899092 30.345090888979676 21.43513422381757 24 21.50988637316487 25.674776412574772 31.248004081931207 21.567333132329143 25 21.16449219384178 28.161935634652885 28.929973827827425 21.743598343677913 26 20.48726269760704 28.62775392091972 28.825249456307457 22.059733925165784 27 21.129524601307004 27.19533146958444 29.623973495992107 22.05117043311645 28 19.82591134288044 27.147161826806943 31.416062613399365 21.610864216913253 29 21.977845532444036 25.423223833625624 30.39326053175718 22.205670102173166 30 22.027442423896424 25.56095333075239 30.98485510749859 21.426749137852596 31 22.693789148985136 26.5832201941415 28.343374622448124 22.379616034425236 32 23.173166297663418 26.261910836207157 29.429689270122868 21.135233596006557 33 22.454011371603816 25.796984580362132 28.763164138949794 22.98583990908426 34 22.479701847751816 25.505112226347364 29.677852133469163 22.337333792431657 35 21.967319573466735 24.900672412531957 31.162904379690964 21.969103634310343 36 23.605801052239087 26.437819235387206 29.036125448022283 20.92025426435143 37 21.789270301274357 26.301516986935326 30.967906529484278 20.94130618230604 38 21.424965077008988 27.181951013257354 28.546757558619777 22.84632635111388 39 22.957651747755207 26.085288812689665 29.08697118206519 21.870088257489932 40 24.07144093242156 24.626283854784585 30.56435196665947 20.737923246134386 41 21.570366035763282 26.00286520171484 29.572592543696107 22.854176218825767 42 21.16181610257636 26.70917488970044 30.085688442318638 22.04332056540456 43 21.950370995452428 25.901530545797733 29.693195056724214 22.45490340202562 44 21.444946558457428 25.9869870602067 29.23576185642235 23.332304524913518 45 22.136270135356696 25.181126777147604 29.027561955972946 23.65504113152275 46 23.946199861200064 25.825172741691183 28.28610626936821 21.94252112774054 47 21.757157206089357 25.329203827167323 31.03427359286661 21.87936537387671 48 21.660461108365638 24.873376281624708 30.318508382409874 23.14765422759978 49 21.411763026766266 24.572583623391893 30.957558976591336 23.05809437325051 50 20.624456976480726 24.635917783340084 30.674250114625913 24.06537512555328 51 21.134698377753473 24.620039641831944 29.44075044735326 24.804511533061323 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 323.0 1 572.5 2 822.0 3 2418.5 4 4015.0 5 3122.5 6 2230.0 7 1865.0 8 1500.0 9 1455.5 10 1411.0 11 1485.5 12 1560.0 13 1594.5 14 1629.0 15 1578.0 16 1527.0 17 1522.0 18 1517.0 19 1704.0 20 1891.0 21 2055.5 22 2220.0 23 2738.5 24 3257.0 25 3754.5 26 5181.0 27 6110.0 28 7011.5 29 7913.0 30 9141.0 31 10369.0 32 12305.0 33 14241.0 34 16597.5 35 18954.0 36 20366.0 37 21778.0 38 23690.5 39 25603.0 40 27956.5 41 30310.0 42 32973.5 43 35637.0 44 38842.5 45 42048.0 46 46694.5 47 51341.0 48 52395.0 49 53449.0 50 51144.5 51 48840.0 52 43719.0 53 38598.0 54 34634.0 55 30670.0 56 27293.5 57 23917.0 58 21716.0 59 19515.0 60 17861.5 61 16208.0 62 14229.0 63 12250.0 64 10234.5 65 8219.0 66 6712.0 67 5205.0 68 4490.5 69 3776.0 70 3129.5 71 2483.0 72 2186.5 73 1890.0 74 1589.0 75 1015.5 76 743.0 77 580.0 78 417.0 79 331.0 80 245.0 81 204.0 82 163.0 83 125.5 84 88.0 85 70.5 86 53.0 87 42.0 88 31.0 89 18.0 90 5.0 91 4.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 560519.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.94581381801472 #Duplication Level Percentage of deduplicated Percentage of total 1 76.82615240832324 32.99361637682273 2 8.459051386262836 7.265616918229262 3 3.4974326005052214 4.50600267907057 4 2.1546812471425136 3.7013815870780062 5 1.4663425901266136 3.148663793450151 6 1.0842672675557727 2.7938844120850663 7 0.8107930122815996 2.437411602527503 8 0.6246273066040771 2.1460102412053352 9 0.511072281021267 1.9753573525458694 >10 4.508070430732931 36.271011683217075 >50 0.04345159913955181 1.1708638661160862 >100 0.012353886025067139 0.9544369980536496 >500 0.001277988209489704 0.32619535509481645 >1k 4.259960698299014E-4 0.3095471345038864 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1692 0.301863094738983 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCTGGTATCGTATGCCG 640 0.11417989399110466 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCTGGTATCGTATGCCGTCTTC 609 0.10864930537591054 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06369097211691307 0.0 2 0.0 0.0 0.0 0.4171134252362543 0.0 3 0.0 0.0 0.0 0.6385153759283807 0.0 4 0.0 0.0 0.0 0.9228946743999757 0.0 5 0.0 0.0 0.0 1.8745127283820888 0.0 6 0.0 0.0 0.0 2.5048214244298586 0.0 7 0.0 0.0 0.0 3.134238090055823 0.0 8 0.0 0.0 0.0 4.147406243142516 0.0 9 0.0 0.0 0.0 4.569158226572159 0.0 10 0.0 0.0 0.0 5.700966425758984 0.0 11 0.0 0.0 0.0 6.857751476756364 0.0 12 0.0 0.0 0.0 7.961728326782857 0.0 13 0.0 0.0 0.0 8.394541487442888 0.0 14 0.0 0.0 0.0 8.57491003873196 0.0 15 0.0 0.0 0.0 8.879270818652 0.0 16 0.0 0.0 0.0 9.49352296710727 0.0 17 0.0 0.0 0.0 10.249251140460894 0.0 18 0.0 0.0 0.0 11.057965920869766 0.0 19 0.0 0.0 0.0 11.528957983583073 0.0 20 0.0 0.0 0.0 11.970334636292437 0.0 21 0.0 0.0 0.0 12.538379608898182 0.0 22 0.0 0.0 0.0 13.173862081392423 0.0 23 0.0 0.0 0.0 13.807738899127417 0.0 24 0.0 0.0 0.0 14.282299083527944 0.0 25 0.0 0.0 0.0 14.73206082220228 0.0 26 0.0 0.0 0.0 15.134366542436563 0.0 27 0.0 0.0 0.0 15.558973023215984 0.0 28 1.7840608436110104E-4 0.0 0.0 15.98768284393571 0.0 29 1.7840608436110104E-4 0.0 0.0 16.44029907995982 0.0 30 1.7840608436110104E-4 0.0 0.0 16.962493688884766 0.0 31 1.7840608436110104E-4 0.0 0.0 17.437232279369656 0.0 32 1.7840608436110104E-4 0.0 0.0 17.879500962500824 0.0 33 1.7840608436110104E-4 0.0 0.0 18.342821563586604 0.0 34 1.7840608436110104E-4 0.0 0.0 18.78758793189883 0.0 35 1.7840608436110104E-4 0.0 0.0 19.250730126900248 0.0 36 1.7840608436110104E-4 0.0 0.0 19.714942758407833 0.0 37 1.7840608436110104E-4 0.0 0.0 20.16773740051631 0.0 38 1.7840608436110104E-4 0.0 0.0 20.626241037324338 0.0 39 1.7840608436110104E-4 0.0 0.0 21.06940175087731 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCAAA 20 7.0301886E-4 45.000004 1 CGTGAAC 20 7.0301886E-4 45.000004 28 ATTCGGA 20 7.0301886E-4 45.000004 18 GTTCGCA 20 7.0301886E-4 45.000004 7 TGACACG 20 7.0301886E-4 45.000004 1 GTGCGTA 20 7.0301886E-4 45.000004 9 CCCGACA 20 7.0301886E-4 45.000004 17 CGTTATT 110 0.0 45.0 1 AACGGCT 25 3.888239E-5 45.0 7 ATGCGCG 25 3.888239E-5 45.0 1 TGTAACG 35 1.2104465E-7 45.0 1 AGTAACG 35 1.2104465E-7 45.0 1 AGGCGAT 130 0.0 43.26923 7 TAGGCGA 60 3.6379788E-12 41.249996 6 CGTTTTT 695 0.0 40.143887 1 CGGTTTT 230 0.0 40.1087 1 CGATGAT 45 1.9252184E-8 40.0 10 TTTGACG 45 1.9252184E-8 40.0 1 TAGCCGT 40 3.453988E-7 39.375004 44 GTAACGG 105 0.0 38.57143 2 >>END_MODULE