SRR2936047.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936047.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	823590
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4285	0.5202831505967775	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1259	0.15286732476110684	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	886	0.10757779963331268	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCCGT	20	7.032121E-4	45.0	37
GCGATCG	25	3.8898394E-5	45.0	9
CGTTTTA	165	0.0	42.272728	1
CGAATAT	120	0.0	41.249996	14
TTTCGAC	55	6.002665E-11	40.909092	24
CGTTATT	355	0.0	40.56338	1
GTTAACG	50	1.0804797E-9	40.5	1
CGTTTTT	1765	0.0	39.900852	1
TTTCGTC	130	0.0	39.807693	16
CGCATAG	40	3.4566256E-7	39.375	2
ATGACGG	120	0.0	39.374996	2
ACACGAC	190	0.0	37.894737	26
CACGACC	190	0.0	37.894737	27
CGACGTT	60	1.546141E-10	37.499996	27
TAGCACG	30	1.13964095E-4	37.499996	1
TAATTCG	30	1.13964095E-4	37.499996	36
AATAGCG	30	1.13964095E-4	37.499996	1
TCAAGCG	205	0.0	37.317074	17
GAACGGG	310	0.0	37.01613	3
ATTACGG	55	2.746674E-9	36.81818	2