##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936047.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 823590 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95706480166102 33.0 31.0 34.0 30.0 34.0 2 32.08646899549533 33.0 31.0 34.0 30.0 34.0 3 31.891273570587305 33.0 31.0 34.0 30.0 34.0 4 35.68288225937663 37.0 35.0 37.0 33.0 37.0 5 31.053179373231828 37.0 35.0 37.0 0.0 37.0 6 33.36486237083986 37.0 35.0 37.0 17.0 37.0 7 29.73410313384087 35.0 32.0 37.0 0.0 37.0 8 32.750549423863816 35.0 35.0 37.0 17.0 37.0 9 36.60221105161549 39.0 35.0 39.0 32.0 39.0 10 36.92669896429049 38.0 37.0 39.0 34.0 39.0 11 37.06302529171068 39.0 37.0 39.0 34.0 39.0 12 37.08863390764822 39.0 37.0 39.0 34.0 39.0 13 36.97105234400612 39.0 37.0 39.0 33.0 39.0 14 38.26861909445233 40.0 38.0 41.0 34.0 41.0 15 38.34125475054335 40.0 38.0 41.0 34.0 41.0 16 38.34781505360677 40.0 38.0 41.0 34.0 41.0 17 38.274669435034426 40.0 37.0 41.0 34.0 41.0 18 38.1885440571158 40.0 37.0 41.0 34.0 41.0 19 38.06277273886278 40.0 37.0 41.0 34.0 41.0 20 37.97480785342221 40.0 36.0 41.0 33.0 41.0 21 37.8561335130344 40.0 36.0 41.0 33.0 41.0 22 37.839988343714715 40.0 36.0 41.0 33.0 41.0 23 37.7585655483918 40.0 36.0 41.0 33.0 41.0 24 37.685276654646124 40.0 36.0 41.0 33.0 41.0 25 37.55598416687915 39.0 36.0 41.0 33.0 41.0 26 37.404633373401815 39.0 35.0 41.0 33.0 41.0 27 37.36104008062264 39.0 35.0 41.0 33.0 41.0 28 37.22779174103619 39.0 35.0 41.0 32.0 41.0 29 37.178298668026564 39.0 35.0 41.0 32.0 41.0 30 37.010064473827995 39.0 35.0 41.0 31.0 41.0 31 36.88177491227431 39.0 35.0 41.0 31.0 41.0 32 36.71901431537537 39.0 35.0 41.0 31.0 41.0 33 36.50188079019901 39.0 35.0 41.0 30.0 41.0 34 36.27672749790551 39.0 35.0 41.0 30.0 41.0 35 36.11223060017727 39.0 35.0 41.0 29.0 41.0 36 35.94018990031448 39.0 35.0 40.0 28.0 41.0 37 35.818634271907136 39.0 35.0 40.0 27.0 41.0 38 35.64385677339453 39.0 35.0 40.0 27.0 41.0 39 35.58734928787382 39.0 35.0 40.0 26.0 41.0 40 35.419605629014434 38.0 35.0 40.0 25.0 41.0 41 35.27865321337073 38.0 34.0 40.0 25.0 41.0 42 35.19591058657827 38.0 34.0 40.0 24.0 41.0 43 34.99083281729987 38.0 34.0 40.0 23.0 41.0 44 34.8167559101009 38.0 34.0 40.0 23.0 41.0 45 34.65294867591884 38.0 34.0 40.0 23.0 41.0 46 34.50821039594944 38.0 34.0 40.0 23.0 41.0 47 34.34079942689931 38.0 33.0 40.0 22.0 41.0 48 34.25046078752777 37.0 33.0 40.0 22.0 41.0 49 34.07512475867847 37.0 33.0 40.0 21.0 41.0 50 33.89726077295742 37.0 33.0 40.0 20.0 41.0 51 31.944535509173253 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 20.0 9 53.0 10 57.0 11 46.0 12 21.0 13 15.0 14 32.0 15 60.0 16 111.0 17 200.0 18 384.0 19 738.0 20 1281.0 21 2100.0 22 3291.0 23 4733.0 24 6763.0 25 9178.0 26 11384.0 27 13009.0 28 14354.0 29 15682.0 30 18334.0 31 22306.0 32 28493.0 33 39493.0 34 55995.0 35 68139.0 36 80249.0 37 125185.0 38 155358.0 39 146512.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.8671911995046 20.098835585667626 24.95999222914314 13.073980985684624 2 32.77261744314525 23.652424143080903 25.665440328318702 17.909518085455144 3 32.55964739737005 23.777486370645587 27.57719253512063 16.08567369686373 4 26.997413761701814 26.046940832210204 28.0293592685681 18.92628613751988 5 21.253779186245584 39.6086645053971 22.920870821646695 16.21668548671062 6 25.21242365740235 34.98306196044148 25.54863463616605 14.255879745990116 7 70.20762758168506 18.70615233307835 7.6665573889920955 3.419662696244491 8 84.44128753384572 4.395269490887456 8.192911521509489 2.970531453757331 9 78.45347806554233 7.3906919705193115 9.663424762321057 4.492405201617309 10 38.62686530919511 32.07166187059095 16.34927573185687 12.952197088357071 11 29.531320195728455 25.454534416396505 27.185857040517735 17.8282883473573 12 26.226763316698843 23.76425163005865 30.295778239172407 19.71320681407011 13 23.653638339465026 24.776769994778956 31.33330904940565 20.23628261635037 14 20.81084034531745 27.105234400611955 30.693063296057506 21.390861958013087 15 20.615961825665682 25.580689420706904 33.48292232785731 20.320426425770105 16 24.7150888184655 25.917507497662672 30.52416857902597 18.843235104845856 17 23.15824621474277 25.48913901334402 29.64581891475127 21.706795857161936 18 24.922837819788974 25.24411418302796 29.30547966828155 20.527568328901516 19 24.372806857781175 27.09297101713231 27.722531842300175 20.811690282786337 20 26.506149904685582 26.228948870190266 27.984798261270775 19.280102963853373 21 25.113345232457895 27.00397042217608 28.81567284692626 19.067011498439758 22 24.816838475455018 24.12547505433529 29.407957843101546 21.649728627108146 23 23.57216576209036 26.73271894996297 29.049527070508386 20.645588217438288 24 23.22575553370002 24.879491008875775 30.553187872606514 21.341565584817687 25 23.244818416930755 26.0084508068335 28.597724595976153 22.149006180259594 26 22.518000461394628 26.988792967374543 28.557413276023265 21.935793295207567 27 22.358090797605605 26.345147464150852 28.94243494942872 22.354326788814824 28 21.03716655131801 27.29780594713389 29.97644459014801 21.68858291140009 29 22.833327262351414 26.16581065821586 29.569324542551513 21.431537536881216 30 22.80600784370864 25.560412341092047 30.20022098374191 21.4333588314574 31 24.322417707840067 25.8971089984094 27.86119306936704 21.919280224383492 32 24.37134982212023 26.425041586226154 27.709782780266877 21.49382581138673 33 23.109071261185786 26.29415121601768 27.644580434439465 22.95219708835707 34 21.786325720322004 27.442295316844543 29.4105076555082 21.360871307325247 35 21.7458929807307 26.627205284182665 28.678104396605107 22.948797338481526 36 21.89244648429437 29.552204373535375 26.95358127223497 21.601767869935284 37 22.30685171019561 28.373462523828604 26.91788389854175 22.40180186743404 38 22.2289003023349 28.986146019257152 26.68888646049612 22.096067217911823 39 22.775652934105562 27.19083524569264 26.41581369370682 23.61769812649498 40 23.358467198484682 26.17321725615901 28.206267681734843 22.26204786362146 41 20.82286088952027 27.1973919061669 28.049757767821365 23.929989436491457 42 22.859796743525298 27.19107808496946 27.52996029577824 22.419164875727 43 22.33380686992314 26.27812382374725 27.846015614565502 23.542053691764107 44 22.282082103959493 26.871015918114594 27.0849573209971 23.76194465692881 45 22.651197804732938 26.343569008851492 27.321118517709053 23.684114668706517 46 22.2525771318253 26.701878361806237 27.16133027355844 23.884214232810013 47 21.069464175135685 27.187556915455506 28.73432168919001 23.008657220218797 48 21.949756553624983 26.589322356998018 28.4759406986486 22.984980390728396 49 22.447212812200245 26.236841146687066 28.152843040833424 23.163103000279264 50 20.583664201848006 26.503600092278923 29.0151653128377 23.89757039303537 51 20.56751538993917 25.914472006702365 28.16037105841499 25.357641544943476 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 488.0 1 1010.5 2 1533.0 3 5779.0 4 10025.0 5 7606.0 6 5187.0 7 4174.0 8 3161.0 9 3005.0 10 2849.0 11 2766.5 12 2684.0 13 2688.0 14 2692.0 15 2682.5 16 2673.0 17 2708.5 18 2744.0 19 2931.0 20 3118.0 21 3234.5 22 3351.0 23 3731.5 24 4112.0 25 4894.0 26 7040.0 27 8404.0 28 9551.0 29 10698.0 30 12852.0 31 15006.0 32 17502.5 33 19999.0 34 23399.5 35 26800.0 36 28052.0 37 29304.0 38 31424.0 39 33544.0 40 36468.0 41 39392.0 42 42367.5 43 45343.0 44 48896.5 45 52450.0 46 55294.5 47 58139.0 48 60202.5 49 62266.0 50 61807.0 51 61348.0 52 58804.5 53 56261.0 54 52595.5 55 48930.0 56 47032.0 57 45134.0 58 42208.5 59 39283.0 60 37052.0 61 34821.0 62 31122.5 63 27424.0 64 23177.0 65 18930.0 66 15769.5 67 12609.0 68 10465.0 69 8321.0 70 7224.0 71 6127.0 72 5286.0 73 4445.0 74 3840.0 75 2646.5 76 2058.0 77 1660.0 78 1262.0 79 1029.5 80 797.0 81 593.5 82 390.0 83 325.0 84 260.0 85 200.5 86 141.0 87 113.5 88 86.0 89 65.5 90 45.0 91 36.5 92 28.0 93 18.5 94 9.0 95 6.5 96 4.0 97 4.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 823590.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.41266307948419 #Duplication Level Percentage of deduplicated Percentage of total 1 73.78600342966479 26.86744882866049 2 8.03588042825406 5.852156131620725 3 3.8837573531485217 4.2425384394799925 4 2.4854400348393053 3.6200596237146025 5 1.7961331326957855 3.2700995303375056 6 1.3031921240940334 2.8471617445484037 7 1.0087269935200478 2.571130530795857 8 0.8512671547632991 2.4797523277621707 9 0.6850202762524447 2.2449071269615906 >10 6.086668161524169 42.498259086631776 >50 0.0577497619426367 1.3611109277106637 >100 0.018110862931273074 1.1088961984822887 >500 0.0013668575797182421 0.34665448933695975 >1k 6.834287898591211E-4 0.6898250139569652 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4285 0.5202831505967775 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1259 0.15286732476110684 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 886 0.10757779963331268 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04577520368144344 0.0 2 0.0 0.0 0.0 0.18747192170861715 0.0 3 0.0 0.0 0.0 0.27707961485690696 0.0 4 0.0 0.0 0.0 0.4004419674838208 0.0 5 0.0 0.0 0.0 0.7526803385179519 0.0 6 0.0 0.0 0.0 1.086584344151823 0.0 7 0.0 0.0 0.0 1.386976529583895 0.0 8 0.0 0.0 0.0 1.992981944899768 0.0 9 0.0 0.0 0.0 2.295802523100086 0.0 10 0.0 0.0 0.0 2.8708459306208187 0.0 11 0.0 0.0 0.0 3.4292548476790636 0.0 12 0.0 0.0 0.0 3.930717954321932 0.0 13 0.0 0.0 0.0 4.1578940977913765 0.0 14 0.0 0.0 0.0 4.259158076227249 0.0 15 1.2141963841231681E-4 0.0 0.0 4.413968115202953 0.0 16 1.2141963841231681E-4 0.0 0.0 4.685341007054481 0.0 17 1.2141963841231681E-4 0.0 0.0 5.041464806517806 0.0 18 1.2141963841231681E-4 0.0 0.0 5.443728068577812 0.0 19 1.2141963841231681E-4 0.0 0.0 5.689481416724341 0.0 20 1.2141963841231681E-4 0.0 0.0 5.956361781954613 0.0 21 1.2141963841231681E-4 0.0 0.0 6.253597056787965 0.0 22 1.2141963841231681E-4 0.0 0.0 6.5782731699025 0.0 23 1.2141963841231681E-4 0.0 0.0 6.91630544324239 0.0 24 1.2141963841231681E-4 0.0 0.0 7.170679585716194 0.0 25 1.2141963841231681E-4 0.0 0.0 7.407205041343387 0.0 26 1.2141963841231681E-4 0.0 0.0 7.634016925897595 0.0 27 1.2141963841231681E-4 0.0 0.0 7.869813863694314 0.0 28 1.2141963841231681E-4 0.0 0.0 8.119331220631626 0.0 29 1.2141963841231681E-4 0.0 0.0 8.385118809116186 0.0 30 1.2141963841231681E-4 0.0 0.0 8.686482351655556 0.0 31 1.2141963841231681E-4 0.0 0.0 8.96963294843308 0.0 32 1.2141963841231681E-4 0.0 0.0 9.25533335761726 0.0 33 1.2141963841231681E-4 0.0 0.0 9.548440364744593 0.0 34 1.2141963841231681E-4 0.0 0.0 9.82284874755643 0.0 35 1.2141963841231681E-4 0.0 0.0 10.117655629621535 0.0 36 1.2141963841231681E-4 0.0 0.0 10.414769484816475 0.0 37 1.2141963841231681E-4 0.0 0.0 10.73422455347928 0.0 38 1.2141963841231681E-4 0.0 0.0 11.056350854187157 0.0 39 2.4283927682463362E-4 0.0 0.0 11.398875654148302 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACCCGT 20 7.032121E-4 45.0 37 GCGATCG 25 3.8898394E-5 45.0 9 CGTTTTA 165 0.0 42.272728 1 CGAATAT 120 0.0 41.249996 14 TTTCGAC 55 6.002665E-11 40.909092 24 CGTTATT 355 0.0 40.56338 1 GTTAACG 50 1.0804797E-9 40.5 1 CGTTTTT 1765 0.0 39.900852 1 TTTCGTC 130 0.0 39.807693 16 CGCATAG 40 3.4566256E-7 39.375 2 ATGACGG 120 0.0 39.374996 2 ACACGAC 190 0.0 37.894737 26 CACGACC 190 0.0 37.894737 27 CGACGTT 60 1.546141E-10 37.499996 27 TAGCACG 30 1.13964095E-4 37.499996 1 TAATTCG 30 1.13964095E-4 37.499996 36 AATAGCG 30 1.13964095E-4 37.499996 1 TCAAGCG 205 0.0 37.317074 17 GAACGGG 310 0.0 37.01613 3 ATTACGG 55 2.746674E-9 36.81818 2 >>END_MODULE