##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936046.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 537906 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.016209151784885 33.0 31.0 34.0 30.0 34.0 2 32.14500674839098 33.0 31.0 34.0 30.0 34.0 3 32.04787453569955 33.0 31.0 34.0 30.0 34.0 4 35.72328064754809 37.0 35.0 37.0 33.0 37.0 5 32.10304774440144 37.0 35.0 37.0 0.0 37.0 6 33.86545418716281 37.0 35.0 37.0 17.0 37.0 7 35.499591006607105 37.0 35.0 37.0 32.0 37.0 8 35.728536212646816 37.0 35.0 37.0 35.0 37.0 9 37.67351172881507 39.0 37.0 39.0 35.0 39.0 10 37.32612575431395 39.0 37.0 39.0 34.0 39.0 11 37.2743081504947 39.0 37.0 39.0 34.0 39.0 12 37.205009797250824 39.0 37.0 39.0 34.0 39.0 13 37.12557584410659 39.0 37.0 39.0 33.0 39.0 14 38.32686008336029 40.0 38.0 41.0 34.0 41.0 15 38.48470922428826 40.0 38.0 41.0 34.0 41.0 16 38.41842069060394 40.0 38.0 41.0 34.0 41.0 17 38.43027592181534 40.0 38.0 41.0 34.0 41.0 18 38.31187047551059 40.0 37.0 41.0 34.0 41.0 19 38.14731570199998 40.0 37.0 41.0 34.0 41.0 20 38.16838443891684 40.0 36.0 41.0 34.0 41.0 21 38.09955828713567 40.0 36.0 41.0 34.0 41.0 22 38.16759619710507 40.0 36.0 41.0 34.0 41.0 23 38.15907240298491 40.0 36.0 41.0 34.0 41.0 24 38.12001353396318 40.0 36.0 41.0 34.0 41.0 25 37.8598119374017 40.0 35.0 41.0 34.0 41.0 26 37.892388261146 40.0 36.0 41.0 34.0 41.0 27 37.84413819514934 40.0 35.0 41.0 34.0 41.0 28 37.77470227140058 40.0 36.0 41.0 33.0 41.0 29 37.74732016374608 40.0 36.0 41.0 33.0 41.0 30 37.566374050484654 40.0 35.0 41.0 33.0 41.0 31 37.51511044680669 40.0 35.0 41.0 33.0 41.0 32 37.41402587069116 40.0 35.0 41.0 33.0 41.0 33 37.25224295694787 40.0 35.0 41.0 33.0 41.0 34 37.135285719066154 40.0 35.0 41.0 32.0 41.0 35 37.05441842998591 40.0 35.0 41.0 32.0 41.0 36 36.899744565035526 40.0 35.0 41.0 31.0 41.0 37 36.864162139853434 40.0 35.0 41.0 31.0 41.0 38 36.751813513885324 40.0 35.0 41.0 31.0 41.0 39 36.71009804687064 40.0 35.0 41.0 31.0 41.0 40 36.63425579934041 39.0 35.0 41.0 31.0 41.0 41 36.503530356605054 39.0 35.0 41.0 31.0 41.0 42 36.479858934460665 39.0 35.0 41.0 31.0 41.0 43 36.38895085758478 39.0 35.0 41.0 30.0 41.0 44 36.3199257862898 39.0 35.0 41.0 30.0 41.0 45 36.30998538778151 39.0 35.0 41.0 30.0 41.0 46 36.18246124787602 39.0 35.0 41.0 30.0 41.0 47 36.09968098515354 39.0 35.0 41.0 30.0 41.0 48 36.057857692608 39.0 35.0 41.0 30.0 41.0 49 36.02453960357386 39.0 35.0 41.0 29.0 41.0 50 35.90732209716939 39.0 35.0 41.0 29.0 41.0 51 34.949037564184074 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 8.0 9 20.0 10 25.0 11 11.0 12 8.0 13 17.0 14 14.0 15 17.0 16 30.0 17 73.0 18 140.0 19 274.0 20 479.0 21 839.0 22 1269.0 23 1858.0 24 2708.0 25 4002.0 26 5567.0 27 6389.0 28 6743.0 29 7027.0 30 7911.0 31 9990.0 32 12890.0 33 18810.0 34 32564.0 35 44709.0 36 40019.0 37 60264.0 38 100124.0 39 172984.0 40 119.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.762906530137236 21.143657070194422 24.749491546850194 15.34394485281815 2 34.635047759273924 24.96235401724465 23.941171877614302 16.46142634586712 3 31.178309964938112 24.089710841671224 28.63269790632564 16.099281287065025 4 28.457202559555018 24.88334392998033 28.93405167445613 17.725401836008523 5 22.625142682922295 35.93936487044205 24.40742434551762 17.028068101118038 6 24.593888151461407 33.260829959137844 27.508709700207845 14.636572189192906 7 75.19789703033616 6.322666042022212 13.392302744345667 5.087134183295966 8 75.27225946540845 6.486263399181269 12.632690470082133 5.608786665328143 9 68.83377393076114 8.469695448647162 15.006153491502234 7.69037712908947 10 38.391466166951105 25.055492967172704 22.51136815726168 14.041672708614517 11 29.528393436771484 24.654493536045333 27.74871445940369 18.0683985677795 12 27.11235792127249 21.657687402631687 31.549006703773525 19.6809479723223 13 23.504292571564548 24.228210876993376 33.58653742475451 18.68095912668756 14 19.143121660661897 27.668774841700966 32.51813513885325 20.669968358783876 15 18.512528211248807 25.11963056742256 37.29183165831949 19.07600956300915 16 20.31953538350567 24.94748153023019 34.6131108409276 20.119872245336545 17 19.53426806914219 25.07668626116831 31.6090543700944 23.779991299595096 18 20.283655508583283 25.454633337423267 33.35025078731228 20.91146036668117 19 22.176551293348652 26.790554483497115 29.912661320007583 21.120232903146647 20 23.349060988351127 26.719910170178434 30.745334686729652 19.18569415474079 21 22.466007071867576 27.178540488486835 30.893501838611208 19.46195060103438 22 20.66885292225779 25.760634757745777 29.964343212382833 23.6061691076136 23 20.314330013050608 26.769547095589193 31.16046298052076 21.75565991083944 24 21.78298810572851 24.643153264696807 31.777299379445477 21.796559250129206 25 20.468446159737947 26.37858659319658 29.892025744275024 23.26094150279045 26 20.021342018865752 27.7717668142761 30.905028016047414 21.30186315081074 27 21.2674705245898 26.48771346666518 31.898138336437963 20.346677672307056 28 18.935278654634825 26.20011674902306 33.11377824378237 21.75082635255974 29 21.34443564488963 24.66936602305979 32.2338847307894 21.752313601261186 30 21.72386996984603 24.841515060252163 32.741036537982474 20.69357843191933 31 22.637784296884586 25.590158875342535 30.295813766717604 21.47624306105528 32 22.68890847099679 25.518770937673125 29.338211509074075 22.454109082256007 33 21.4470558052894 25.26203463058601 31.554212074228584 21.736697489896002 34 22.04734656241053 24.244756518796965 31.10097303246292 22.606923886329582 35 21.699888084535214 22.899168256163716 30.86003874282867 24.540904916472396 36 21.919071361910817 24.61526735154469 33.030678222589074 20.43498306395541 37 20.789505973162598 25.24920711053604 32.73229895186148 21.22898796443988 38 19.467713689752483 25.448870248705163 30.833825984465683 24.249590077076665 39 22.162236524597233 23.44034087740237 31.720969834878215 22.67645276312218 40 23.672537580915627 22.336058716578734 32.084602142381755 21.90680156012389 41 20.97634159128175 24.128937026171858 30.881975661174998 24.01274572137139 42 21.177491978152315 24.125776622681286 31.894792026859715 22.801939372306684 43 22.101259327837948 23.117607909188596 31.70237922611014 23.078753536863317 44 20.607132101147783 24.958449989403352 30.781214561652035 23.65320334779683 45 21.610281350273098 23.855097359018117 29.42837596159924 25.106245329109544 46 22.860871602101483 24.79429491398125 29.61260889449086 22.732224589426405 47 20.599695857640555 24.410027030745148 32.32572233810369 22.664554773510616 48 20.142924600208957 23.462835514011743 32.10114778418534 24.293092101593956 49 20.514550869482772 21.796745156216886 34.04107780913394 23.647626165166404 50 19.801043304964065 22.54724803218406 32.66964860031307 24.982060062538807 51 19.545422434403037 22.677010481385224 30.0699378701855 27.70762921402624 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 464.0 1 816.0 2 1168.0 3 5463.0 4 9758.0 5 6223.0 6 2688.0 7 2536.5 8 2385.0 9 2386.0 10 2387.0 11 2415.5 12 2444.0 13 2430.0 14 2416.0 15 2273.0 16 2130.0 17 2191.5 18 2253.0 19 2173.5 20 2094.0 21 2712.0 22 3330.0 23 3572.0 24 3814.0 25 4090.5 26 4742.0 27 5117.0 28 6000.0 29 6883.0 30 8241.5 31 9600.0 32 10303.0 33 11006.0 34 12535.5 35 14065.0 36 14860.0 37 15655.0 38 16974.5 39 18294.0 40 20667.0 41 23040.0 42 26997.0 43 30954.0 44 34811.5 45 38669.0 46 44857.5 47 51046.0 48 52922.0 49 54798.0 50 52790.5 51 50783.0 52 43498.0 53 36213.0 54 32153.5 55 28094.0 56 24891.5 57 21689.0 58 21163.0 59 20637.0 60 19103.0 61 17569.0 62 16326.0 63 15083.0 64 12240.0 65 9397.0 66 7625.0 67 5853.0 68 4818.5 69 3784.0 70 3423.5 71 3063.0 72 2628.5 73 2194.0 74 1693.0 75 911.5 76 631.0 77 578.5 78 526.0 79 370.0 80 214.0 81 148.0 82 82.0 83 72.0 84 62.0 85 34.5 86 7.0 87 4.5 88 2.0 89 2.5 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 537906.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.929162902659435 #Duplication Level Percentage of deduplicated Percentage of total 1 72.66827977038521 23.92905622415046 2 11.034186669963306 7.266930607071499 3 4.149609930219833 4.099295441241064 4 2.2440582896671644 2.9557984393405348 5 1.295463577717018 2.132926559255285 6 0.9166710390309094 1.8111125983439342 7 0.6644288640555696 1.5315360411200367 8 0.5683969436821811 1.4973468441507427 9 0.46724607466966706 1.3847419897583078 >10 5.686961794520928 42.27622651278778 >50 0.244559471202369 5.0152005485367965 >100 0.05383744799302727 3.0375609218837814 >500 0.0028636940421823015 0.7232736952330996 >1k 0.0028636940421823015 1.2505939695151715 >5k 5.727388084364603E-4 1.0883996076115299 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5771 1.072864032005592 No Hit CCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 1705 0.31696987949567396 No Hit GCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 1614 0.30005242551672595 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCG 1131 0.21025978516692506 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTC 1091 0.2028235416596952 No Hit CTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGCT 1090 0.20263763557201447 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCC 939 0.17456581633222162 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGC 835 0.1552315832134239 No Hit TCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 785 0.14593627882938653 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 712 0.132365134428692 No Hit ACTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 564 0.10485103345194142 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.859060876807472E-4 0.0 0.0 0.21211884604373255 0.0 2 1.859060876807472E-4 0.0 0.0 1.125103642643882 0.0 3 1.859060876807472E-4 0.0 0.0 1.5571493904139384 0.0 4 1.859060876807472E-4 0.0 0.0 2.1167267143329878 0.0 5 1.859060876807472E-4 0.0 0.0 3.648221064646983 0.0 6 1.859060876807472E-4 0.0 0.0 4.64523541287883 0.0 7 1.859060876807472E-4 0.0 0.0 5.697463869151859 0.0 8 3.718121753614944E-4 0.0 0.0 7.161102497462382 0.0 9 3.718121753614944E-4 0.0 0.0 7.7323919049053185 0.0 10 3.718121753614944E-4 0.0 0.0 9.074633857960313 0.0 11 3.718121753614944E-4 0.0 0.0 10.801329600339093 0.0 12 3.718121753614944E-4 0.0 0.0 12.233364193743888 0.0 13 3.718121753614944E-4 0.0 0.0 12.761895201020252 0.0 14 3.718121753614944E-4 0.0 0.0 12.98014894795745 0.0 15 3.718121753614944E-4 0.0 0.0 13.38337925213699 0.0 16 3.718121753614944E-4 0.0 0.0 14.175896903920016 0.0 17 3.718121753614944E-4 0.0 0.0 15.078099147434681 0.0 18 3.718121753614944E-4 0.0 0.0 16.063959130405685 0.0 19 3.718121753614944E-4 0.0 0.0 16.67075660059564 0.0 20 3.718121753614944E-4 0.0 0.0 17.243161444564663 0.0 21 3.718121753614944E-4 0.0 0.0 17.918372355021138 0.0 22 3.718121753614944E-4 0.0 0.0 18.639687975222436 0.0 23 3.718121753614944E-4 0.0 0.0 19.348361981461444 0.0 24 3.718121753614944E-4 0.0 0.0 19.901618498399348 0.0 25 3.718121753614944E-4 0.0 0.0 20.395385067279413 0.0 26 3.718121753614944E-4 0.0 0.0 20.865541563024024 0.0 27 5.577182630422415E-4 0.0 0.0 21.298702747320164 0.0 28 5.577182630422415E-4 0.0 0.0 21.782616293553147 0.0 29 5.577182630422415E-4 0.0 0.0 22.263369436295562 0.0 30 5.577182630422415E-4 0.0 0.0 22.781861514837164 0.0 31 7.436243507229888E-4 0.0 0.0 23.260011972352046 0.0 32 7.436243507229888E-4 0.0 0.0 23.72849531330753 0.0 33 7.436243507229888E-4 0.0 0.0 24.186567913352892 0.0 34 7.436243507229888E-4 0.0 0.0 24.633114335962045 0.0 35 0.001115436526084483 0.0 0.0 25.1540231936435 0.0 36 0.001115436526084483 0.0 0.0 25.619160225020728 0.0 37 0.001115436526084483 0.0 0.0 26.12686975047685 0.0 38 0.001115436526084483 0.0 0.0 26.599257119273627 0.0 39 0.001115436526084483 0.0 0.0 27.056400188880584 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCA 20 7.0299354E-4 45.000004 15 CGAACTA 20 7.0299354E-4 45.000004 12 ACGCATG 30 2.1633405E-6 45.000004 1 CGACGAT 20 7.0299354E-4 45.000004 20 GCGCAAC 20 7.0299354E-4 45.000004 15 CTAACGG 20 7.0299354E-4 45.000004 2 CGTAGTC 20 7.0299354E-4 45.000004 12 AACGCGC 20 7.0299354E-4 45.000004 31 GCGATAT 40 6.8030204E-9 45.000004 9 TCGTAGT 20 7.0299354E-4 45.000004 11 TCGTAAG 35 1.2103192E-7 45.000004 1 GTATACG 20 7.0299354E-4 45.000004 1 CCGAACT 30 2.1633405E-6 45.000004 11 GACGATT 20 7.0299354E-4 45.000004 42 TAGGACG 40 6.8030204E-9 45.000004 1 TAGTGCG 20 7.0299354E-4 45.000004 1 CGCCGAC 20 7.0299354E-4 45.000004 13 TGTCGTC 20 7.0299354E-4 45.000004 35 ATCGCAT 20 7.0299354E-4 45.000004 14 TCGCGCC 20 7.0299354E-4 45.000004 38 >>END_MODULE