##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936044.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 735311 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09544940848158 33.0 31.0 34.0 30.0 34.0 2 32.199874610878936 33.0 31.0 34.0 30.0 34.0 3 32.12641045761589 33.0 31.0 34.0 30.0 34.0 4 35.77034207294601 37.0 35.0 37.0 35.0 37.0 5 31.92893619162504 37.0 35.0 37.0 0.0 37.0 6 33.792485084542456 37.0 35.0 37.0 17.0 37.0 7 35.4771654442814 37.0 35.0 37.0 32.0 37.0 8 35.7206012149961 37.0 35.0 37.0 35.0 37.0 9 37.67445611448761 39.0 37.0 39.0 35.0 39.0 10 37.343514512906786 39.0 37.0 39.0 34.0 39.0 11 37.33230429029349 39.0 37.0 39.0 34.0 39.0 12 37.2814210585725 39.0 37.0 39.0 34.0 39.0 13 37.20393683761021 39.0 37.0 39.0 34.0 39.0 14 38.45263160757829 40.0 38.0 41.0 34.0 41.0 15 38.58828441298988 40.0 38.0 41.0 34.0 41.0 16 38.54577178907972 40.0 38.0 41.0 34.0 41.0 17 38.535195311915636 40.0 38.0 41.0 34.0 41.0 18 38.4323816725168 40.0 38.0 41.0 34.0 41.0 19 38.2774037108108 40.0 37.0 41.0 34.0 41.0 20 38.30712310845343 40.0 37.0 41.0 34.0 41.0 21 38.239928411243675 40.0 37.0 41.0 34.0 41.0 22 38.29654119141424 40.0 37.0 41.0 34.0 41.0 23 38.313446963257725 40.0 37.0 41.0 34.0 41.0 24 38.26761057566118 40.0 37.0 41.0 34.0 41.0 25 38.02741833047513 40.0 36.0 41.0 34.0 41.0 26 38.05425595428329 40.0 36.0 41.0 34.0 41.0 27 38.027539367696114 40.0 36.0 41.0 34.0 41.0 28 37.96720843289438 40.0 36.0 41.0 34.0 41.0 29 37.908584258905414 40.0 36.0 41.0 34.0 41.0 30 37.75619159784091 40.0 36.0 41.0 33.0 41.0 31 37.7278049695979 40.0 36.0 41.0 33.0 41.0 32 37.617920852537225 40.0 36.0 41.0 33.0 41.0 33 37.48186277643065 40.0 36.0 41.0 33.0 41.0 34 37.353933233692956 40.0 36.0 41.0 33.0 41.0 35 37.315295160823105 40.0 36.0 41.0 33.0 41.0 36 37.204630421685515 40.0 35.0 41.0 32.0 41.0 37 37.144761876267324 40.0 35.0 41.0 32.0 41.0 38 37.03720602574965 40.0 35.0 41.0 32.0 41.0 39 36.94015593401976 40.0 35.0 41.0 31.0 41.0 40 36.84896866767939 40.0 35.0 41.0 31.0 41.0 41 36.74559064123888 39.0 35.0 41.0 31.0 41.0 42 36.74027996317204 40.0 35.0 41.0 31.0 41.0 43 36.67439899579906 39.0 35.0 41.0 31.0 41.0 44 36.63063112070947 39.0 35.0 41.0 31.0 41.0 45 36.601436671014035 39.0 35.0 41.0 31.0 41.0 46 36.48581076578482 39.0 35.0 41.0 31.0 41.0 47 36.40633827047331 39.0 35.0 41.0 31.0 41.0 48 36.37405941159591 39.0 35.0 41.0 31.0 41.0 49 36.33470463518157 39.0 35.0 41.0 31.0 41.0 50 36.219188887423144 39.0 35.0 41.0 30.0 41.0 51 35.25086528013317 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 21.0 9 30.0 10 38.0 11 25.0 12 22.0 13 19.0 14 19.0 15 40.0 16 42.0 17 92.0 18 173.0 19 328.0 20 580.0 21 1044.0 22 1556.0 23 2491.0 24 3434.0 25 5038.0 26 6714.0 27 7648.0 28 8197.0 29 8923.0 30 10306.0 31 12597.0 32 16630.0 33 23816.0 34 40890.0 35 57316.0 36 54595.0 37 83928.0 38 139765.0 39 248806.0 40 187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.37987599804708 20.42781897727628 23.18787560637608 13.004429418300557 2 34.03811448489143 25.05402475959152 24.026840343745707 16.881020411771345 3 31.883787948228708 24.521732981010754 27.064738593601888 16.529740477158644 4 28.712612758411066 24.745855835150024 27.986253435621116 18.55527797081779 5 23.02345538146444 37.075876737870104 22.617096711459507 17.283571169205956 6 24.609314970128285 34.47616042735659 26.687755249139478 14.226769353375646 7 76.04265406066276 6.851658685916571 12.362388159567857 4.743299093852805 8 76.55318633884166 7.518179382601375 11.02635483489299 4.902279443663973 9 70.15643720820171 8.74011132704393 13.342789649549648 7.760661815204722 10 38.021055036576364 26.367482602599445 20.92434357707147 14.687118783752725 11 30.044022189250537 25.700553915282104 26.249301316041784 18.006122579425575 12 27.611854031831427 22.41337338894699 30.335735491513116 19.639037087708466 13 24.214924025344377 24.40232772255549 31.80354979049681 19.579198461603323 14 20.096394586780285 27.847536620559193 30.615073077922133 21.44099571473839 15 19.11055322169803 26.599629272511905 35.120377636129476 19.169439869660593 16 21.189129497586737 24.51547712464522 33.19547783182898 21.099915545939066 17 20.844241416217084 25.498326558422217 30.17457919166176 23.48285283369894 18 21.594128198816556 25.8551823650129 31.315185003352326 21.23550443281822 19 23.30524091166867 26.951589191512166 28.947751359628782 20.795418537190386 20 24.891100500332513 25.606444076044017 30.599569433885797 18.902885989737676 21 23.881051691053173 26.900046374935233 29.739525180501857 19.47937675350974 22 21.79281963686114 25.319762658249367 29.58367275887346 23.30374494601604 23 21.68715006303455 26.55121438411774 30.09257307452221 21.6690624783255 24 21.496074450130624 25.523621977639394 30.859051476178106 22.121252096051876 25 21.386868957488737 27.01849965524791 29.441148031241205 22.153483356022146 26 20.801946387310945 27.870384095981155 29.63875149426569 21.688918022442206 27 22.24800118589277 27.602334250405608 29.296039362936227 20.853625200765393 28 19.550231126693333 27.242622509387182 31.128325293651258 22.078821070268226 29 21.025253260185146 27.086090103371223 30.357494991914987 21.531161644528645 30 21.921336686109687 27.07480236253776 29.786308106365876 21.217552844986677 31 22.038565994524767 27.31198091691815 28.016444742428714 22.63300834612837 32 23.547451350516994 28.846977673392622 27.882623814957206 19.72294716113318 33 22.65123192771494 27.458041563365704 27.671284667304043 22.219441841615318 34 21.264879758360745 27.05113890585072 29.13161913802459 22.55236219776394 35 22.07025326698499 27.42934622221074 27.85868836451515 22.641712146289123 36 21.889785410526976 28.484545994823957 27.543311605565535 22.082356989083532 37 22.110100352095916 27.69073222078821 28.729068380589982 21.470099046525892 38 21.443035667901064 28.320261766789834 26.582629662822942 23.65407290248616 39 21.948264067857 26.717266571559517 28.446602865998194 22.887866494585285 40 22.077325104615596 26.551486377872763 30.18273900431246 21.188449513199174 41 19.703227613893983 27.601926259773073 29.157866535384347 23.536979590948594 42 21.046060782444435 27.07371438751766 28.669365751362346 23.210859078675554 43 22.650823937082404 25.89203751881857 27.75397076883115 23.70316777526788 44 21.978183380909574 26.395497959366853 27.868752133451014 23.757566526272555 45 21.59848009889693 26.203742362075367 27.76648248156222 24.43129505746548 46 21.971111543278965 27.496392682824002 28.188752786236027 22.343742987661003 47 20.64364602188734 26.92697375668255 30.23727375219465 22.19210646923547 48 21.10086752408165 25.921276847483583 29.348670154533252 23.629185473901522 49 20.855529157050555 25.57965269117421 30.307720134745708 23.257098017029527 50 19.987053097260887 25.63758736099419 29.87715402054369 24.498205521201232 51 19.723491148643227 25.269579810447553 28.926399849859447 26.080529191049774 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 479.0 1 1034.5 2 1590.0 3 6068.0 4 10546.0 5 6825.0 6 3104.0 7 2966.0 8 2828.0 9 2788.5 10 2749.0 11 2751.0 12 2753.0 13 2650.5 14 2548.0 15 2589.5 16 2631.0 17 2520.0 18 2409.0 19 2422.5 20 2436.0 21 3307.0 22 4178.0 23 3864.5 24 3551.0 25 4266.5 26 6020.0 27 7058.0 28 8990.5 29 10923.0 30 12462.5 31 14002.0 32 15703.0 33 17404.0 34 19032.5 35 20661.0 36 23119.5 37 25578.0 38 26778.5 39 27979.0 40 31692.0 41 35405.0 42 38330.0 43 41255.0 44 46226.0 45 51197.0 46 59413.0 47 67629.0 48 66927.5 49 66226.0 50 64472.5 51 62719.0 52 54426.0 53 46133.0 54 41857.0 55 37581.0 56 35918.5 57 34256.0 58 32443.0 59 30630.0 60 29754.0 61 28878.0 62 25653.5 63 22429.0 64 18356.0 65 14283.0 66 11944.0 67 9605.0 68 7888.0 69 6171.0 70 5091.0 71 4011.0 72 3442.0 73 2873.0 74 2298.5 75 1437.5 76 1151.0 77 784.5 78 418.0 79 316.0 80 214.0 81 149.5 82 85.0 83 57.0 84 29.0 85 17.0 86 5.0 87 4.0 88 3.0 89 4.0 90 5.0 91 4.5 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 735311.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.104651105529463 #Duplication Level Percentage of deduplicated Percentage of total 1 72.9310565390425 22.684950684045603 2 10.43747506698986 6.493080407627646 3 4.010851893846586 3.7426844638215053 4 2.065593631051225 2.5699827687860837 5 1.3907887009620443 2.162999865246847 6 0.9150996410760593 1.7078313037479638 7 0.6909289687174277 1.5043773157461207 8 0.5443824667857785 1.3546261357871296 9 0.4539975973299 1.2709293180925676 >10 6.182749574156297 44.99111583285739 >50 0.3219478615765252 6.105294004908442 >100 0.05027678932082034 2.858401364621088 >500 0.002205122338632471 0.4996063622378463 >1k 0.002205122338632471 1.1983968095853446 >5k 4.410244677264942E-4 0.8557233628884364 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6238 0.8483485219179367 No Hit GCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 2059 0.2800175707965745 TruSeq Adapter, Index 23 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTC 1991 0.27076978312577943 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCG 1923 0.26152199545498434 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGC 1683 0.2288827448521782 No Hit CTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGCT 1080 0.14687662771262772 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCC 860 0.1169573146600554 No Hit CCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 816 0.11097345204954094 TruSeq Adapter, Index 23 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15082053716046678 0.0 2 0.0 0.0 0.0 0.7181995101392472 0.0 3 0.0 0.0 0.0 0.9934571902229125 0.0 4 1.3599687751169234E-4 0.0 0.0 1.384856203701563 0.0 5 1.3599687751169234E-4 0.0 0.0 2.502342546215139 0.0 6 1.3599687751169234E-4 0.0 0.0 3.182190936896089 0.0 7 1.3599687751169234E-4 0.0 0.0 3.852111555518685 0.0 8 1.3599687751169234E-4 0.0 0.0 4.7947059135522245 0.0 9 1.3599687751169234E-4 0.0 0.0 5.165297404771587 0.0 10 1.3599687751169234E-4 0.0 0.0 6.228928983790532 0.0 11 1.3599687751169234E-4 0.0 0.0 7.388438361455221 0.0 12 1.3599687751169234E-4 0.0 0.0 8.538427957694092 0.0 13 1.3599687751169234E-4 0.0 0.0 8.960426268612872 0.0 14 1.3599687751169234E-4 0.0 0.0 9.155309794087128 0.0 15 1.3599687751169234E-4 0.0 0.0 9.484014247032889 0.0 16 1.3599687751169234E-4 0.0 0.0 10.07165675476091 0.0 17 1.3599687751169234E-4 0.0 0.0 10.770408711415985 0.0 18 1.3599687751169234E-4 0.0 0.0 11.51172769073222 0.0 19 1.3599687751169234E-4 0.0 0.0 12.013828162505389 0.0 20 1.3599687751169234E-4 0.0 0.0 12.485329336838426 0.0 21 2.719937550233847E-4 0.0 0.0 13.062228091243025 0.0 22 2.719937550233847E-4 0.0 0.0 13.657486424111703 0.0 23 2.719937550233847E-4 0.0 0.0 14.25029681318517 0.0 24 2.719937550233847E-4 0.0 0.0 14.719214046845485 0.0 25 2.719937550233847E-4 0.0 0.0 15.16569179571637 0.0 26 2.719937550233847E-4 0.0 0.0 15.555594843542393 0.0 27 2.719937550233847E-4 0.0 0.0 15.964265460465027 0.0 28 2.719937550233847E-4 0.0 0.0 16.373616061775223 0.0 29 2.719937550233847E-4 0.0 0.0 16.800646257161937 0.0 30 4.07990632535077E-4 0.0 0.0 17.29037101308154 0.0 31 4.07990632535077E-4 0.0 0.0 17.74296862144045 0.0 32 4.07990632535077E-4 0.0 0.0 18.18237453268073 0.0 33 4.07990632535077E-4 0.0 0.0 18.597572999723926 0.0 34 4.07990632535077E-4 0.0 0.0 19.025691170130735 0.0 35 4.07990632535077E-4 0.0 0.0 19.502632219564237 0.0 36 4.07990632535077E-4 0.0 0.0 19.948837974680103 0.0 37 4.07990632535077E-4 0.0 0.0 20.366348388640997 0.0 38 4.07990632535077E-4 0.0 0.0 20.78372280572438 0.0 39 4.07990632535077E-4 0.0 0.0 21.253184026894743 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGTC 25 3.8894294E-5 45.000004 19 CGGTCGA 25 3.8894294E-5 45.000004 36 AACGTTG 45 3.8380676E-10 45.0 1 CGCGGTA 20 7.031628E-4 45.0 31 CGACCGT 20 7.031628E-4 45.0 35 TTCGTGT 20 7.031628E-4 45.0 28 TGCGGAT 20 7.031628E-4 45.0 18 TCGGACG 20 7.031628E-4 45.0 1 TATTACG 20 7.031628E-4 45.0 1 GTATACG 20 7.031628E-4 45.0 1 GTCGACC 30 2.1644319E-6 44.999996 41 CGTTTTT 2220 0.0 41.655403 1 CGTTATT 330 0.0 41.59091 1 CGTTCAT 50 1.0804797E-9 40.500004 17 TGTAGCG 50 1.0804797E-9 40.500004 1 GCGAGAC 45 1.9266736E-8 40.0 21 ACACGAC 45 1.9266736E-8 40.0 26 TCACGTC 45 1.9266736E-8 40.0 38 ATGGGAC 345 0.0 39.782608 5 TAGGGCG 165 0.0 39.545456 5 >>END_MODULE