##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936042.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 547671 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.116511555295055 33.0 31.0 34.0 30.0 34.0 2 32.25861876929763 34.0 31.0 34.0 30.0 34.0 3 32.12677136456011 33.0 31.0 34.0 30.0 34.0 4 35.795494010089996 37.0 35.0 37.0 35.0 37.0 5 32.338476932318855 37.0 35.0 37.0 10.0 37.0 6 34.02712029667446 37.0 35.0 37.0 19.0 37.0 7 35.61215948991274 37.0 35.0 37.0 32.0 37.0 8 35.857445437132874 37.0 35.0 37.0 35.0 37.0 9 37.82316755862553 39.0 38.0 39.0 35.0 39.0 10 37.45081627473429 39.0 37.0 39.0 35.0 39.0 11 37.37335553644432 39.0 37.0 39.0 34.0 39.0 12 37.32325428952784 39.0 37.0 39.0 35.0 39.0 13 37.28012985898468 39.0 37.0 39.0 34.0 39.0 14 38.55314595806607 40.0 38.0 41.0 34.0 41.0 15 38.70493416668036 40.0 38.0 41.0 35.0 41.0 16 38.64158043789063 40.0 38.0 41.0 35.0 41.0 17 38.610019519017804 40.0 38.0 41.0 35.0 41.0 18 38.453867376581925 40.0 38.0 41.0 34.0 41.0 19 38.230402924383434 40.0 37.0 41.0 34.0 41.0 20 38.20968062942898 40.0 36.0 41.0 34.0 41.0 21 38.12047561400914 40.0 36.0 41.0 34.0 41.0 22 38.15489043604646 40.0 36.0 41.0 34.0 41.0 23 38.16431032499438 40.0 36.0 41.0 34.0 41.0 24 38.11728939454527 40.0 36.0 41.0 34.0 41.0 25 37.843214265498816 40.0 35.0 41.0 34.0 41.0 26 37.90447732306439 40.0 35.0 41.0 34.0 41.0 27 37.88375685402367 40.0 35.0 41.0 34.0 41.0 28 37.79227127235146 40.0 35.0 41.0 34.0 41.0 29 37.746824279540085 40.0 35.0 41.0 34.0 41.0 30 37.54565971176126 40.0 35.0 41.0 33.0 41.0 31 37.45305849679826 40.0 35.0 41.0 33.0 41.0 32 37.23479789873848 40.0 35.0 41.0 33.0 41.0 33 36.997286692192944 40.0 35.0 41.0 32.0 41.0 34 36.74191257159864 40.0 35.0 41.0 31.0 41.0 35 36.62152642736241 40.0 35.0 41.0 31.0 41.0 36 36.48412824487694 40.0 35.0 41.0 30.0 41.0 37 36.412552426548054 40.0 35.0 41.0 30.0 41.0 38 36.300224039615024 40.0 35.0 41.0 30.0 41.0 39 36.22020884801277 40.0 35.0 41.0 29.0 41.0 40 36.133244228743166 39.0 35.0 41.0 29.0 41.0 41 36.02729558439282 39.0 35.0 41.0 29.0 41.0 42 35.98444321499586 39.0 35.0 41.0 28.0 41.0 43 35.90192469566583 39.0 35.0 41.0 28.0 41.0 44 35.81242753404872 39.0 35.0 41.0 27.0 41.0 45 35.81103436187054 39.0 35.0 41.0 27.0 41.0 46 35.67202572347267 39.0 35.0 41.0 27.0 41.0 47 35.600068289173606 39.0 35.0 41.0 26.0 41.0 48 35.564212821201046 39.0 35.0 41.0 26.0 41.0 49 35.521964829249676 39.0 35.0 41.0 27.0 41.0 50 35.3953121490822 39.0 35.0 41.0 26.0 41.0 51 34.448415198175546 37.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 4.0 9 16.0 10 18.0 11 17.0 12 17.0 13 12.0 14 11.0 15 18.0 16 41.0 17 77.0 18 171.0 19 307.0 20 639.0 21 1000.0 22 1597.0 23 2382.0 24 3742.0 25 5838.0 26 7984.0 27 8814.0 28 8059.0 29 7626.0 30 8064.0 31 9707.0 32 12013.0 33 17333.0 34 29753.0 35 41740.0 36 38819.0 37 59253.0 38 100957.0 39 181504.0 40 134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.51277317951836 21.025396634110624 22.076940352876086 17.384889833494928 2 35.82680112695395 23.96986511975255 24.272966799410593 15.930366953882896 3 29.32015753983687 23.488371668392155 31.999503351464657 15.191967440306314 4 26.674043358147504 25.01720923693239 31.009310334123953 17.299437070796152 5 21.294353726963816 36.03312937876937 26.37075908711617 16.301757807150643 6 24.82767939145947 31.776741876053322 29.120950351579687 14.274628380907517 7 77.36213894838325 5.286020256686952 13.416996700573886 3.934844094355918 8 79.19225228284864 4.837210661145104 12.34116832916112 3.6293687268451316 9 73.34129431720869 7.179310206309992 14.115773886146975 5.3636215903343425 10 37.80444829103604 28.939819709278012 20.564718599305056 12.691013400380886 11 28.131122516985563 23.44181086820372 30.75623869074682 17.6708279240639 12 25.703387617748614 21.407560378402362 33.699611628149015 19.18944037570001 13 22.98971462794269 22.817713554305413 34.46302615986605 19.729545657885847 14 18.914275176155027 25.88451826005029 33.884759280663026 21.316447283131662 15 18.57922000617159 24.947641923709675 36.87797966297284 19.595158407145895 16 21.196119568134883 23.6881266307692 35.335630332809295 19.780123468286618 17 21.193380697535563 24.12780665764665 32.5167847119895 22.162027932828284 18 22.211875377735904 24.612038979606368 33.2473327965147 19.92875284614303 19 22.714184245651133 26.61689225830837 30.475960932749775 20.192962563290735 20 24.026103262725247 24.777831946551853 32.03510866925581 19.160956121467084 21 23.347776310960413 26.07623920200266 31.88556633453296 18.69041815250397 22 22.39793598711635 23.900845580649698 32.21039638761227 21.49082204462168 23 21.653693549594554 25.413797699713882 32.08075651257781 20.851752238113757 24 21.409386292135242 24.070107783687654 33.53217533884394 20.988330585333166 25 20.54919833257558 26.324928652420887 31.696949445926474 21.428923569077053 26 19.655778743077505 28.105924907471824 31.15867007747352 21.079626271977155 27 19.772272039235233 27.220721929771706 31.883192646680214 21.123813384312847 28 18.832656832295303 26.598633120979564 33.891880344221256 20.676829702503877 29 20.01639670532126 25.440273448840635 32.980384208767674 21.56294563707043 30 20.715539073640926 26.366742076903833 32.095363822440845 20.822355027014396 31 21.653693549594554 25.832114535916634 31.00145890507257 21.512733009416237 32 22.23123006330443 26.592242422914484 30.74053583264405 20.435991681137033 33 22.63037480531195 26.116774486872597 29.30317654212109 21.94967416569437 34 20.026074048105524 26.73283778034623 30.652709382092535 22.588378789455714 35 21.17749524805951 27.16137973345311 29.840725545080897 21.82039947340648 36 22.175539694451597 27.7918677454165 28.993318981651395 21.03927357848051 37 21.300927016402184 27.769591597875365 30.12027293758479 20.80920844813766 38 21.078530723737426 27.19570691163125 29.54218864975505 22.183573714876268 39 22.591482842801607 25.966501786656586 28.90859658444577 22.533418786096032 40 22.558251212863198 25.827001977464576 29.91230136340978 21.70244544626245 41 20.22509864498942 26.181594424389825 30.468839869191537 23.124467061429215 42 20.682124852329224 26.180864058896674 30.40931508149966 22.72769600727444 43 22.09227802823228 25.90679440759142 29.809867602995226 22.19105996118107 44 21.1260044807923 26.592972788407636 29.620702940268885 22.660319790531176 45 21.100624279905272 25.802352142070696 28.54761343945544 24.549410138568593 46 21.347852999337196 27.3468925687137 28.777313387051716 22.527941044897393 47 19.975496237704753 26.036799465372457 31.61715701579963 22.37054728112316 48 20.31164695592792 25.35317736378227 31.695306123566887 22.63986955672292 49 21.274451267275428 24.766511281408 30.938830064034796 23.02020738728178 50 20.08322514794466 24.902541854507543 31.240288421333247 23.773944576214554 51 19.924918427303982 25.033277277781735 29.744499891358135 25.297304403556147 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 303.0 1 685.0 2 1067.0 3 7045.0 4 13023.0 5 8541.0 6 4059.0 7 3941.5 8 3824.0 9 3784.5 10 3745.0 11 3693.0 12 3641.0 13 3542.0 14 3443.0 15 3295.0 16 3147.0 17 2969.0 18 2791.0 19 2724.5 20 2658.0 21 2791.5 22 2925.0 23 3061.5 24 3198.0 25 3429.5 26 4584.5 27 5508.0 28 6314.0 29 7120.0 30 8201.0 31 9282.0 32 10999.0 33 12716.0 34 14850.0 35 16984.0 36 17875.5 37 18767.0 38 20358.5 39 21950.0 40 23433.0 41 24916.0 42 27577.5 43 30239.0 44 32501.5 45 34764.0 46 38611.5 47 42459.0 48 43806.5 49 45154.0 50 44483.5 51 43813.0 52 39425.0 53 35037.0 54 31995.5 55 28954.0 56 27186.0 57 25418.0 58 23991.5 59 22565.0 60 22183.5 61 21802.0 62 18602.0 63 15402.0 64 13451.5 65 11501.0 66 9389.0 67 7277.0 68 6400.5 69 5524.0 70 4389.5 71 3255.0 72 2873.5 73 2492.0 74 2012.5 75 1195.0 76 857.0 77 660.0 78 463.0 79 341.0 80 219.0 81 149.5 82 80.0 83 78.5 84 77.0 85 63.5 86 50.0 87 27.5 88 5.0 89 2.5 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 547671.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.7809039520787 #Duplication Level Percentage of deduplicated Percentage of total 1 75.55948958756788 27.03586839600857 2 8.843069070300693 6.32826010092054 3 3.43145751943014 3.6834195575510424 4 1.9187439458325768 2.746175713378717 5 1.328583352919389 2.3768956671569668 6 0.960725929436178 2.0625385323256453 7 0.7442654895497064 1.8641344397497415 8 0.6252824998057778 1.789853845477296 9 0.5336247263047809 1.7184217570529081 >10 5.905880513013914 43.71130831655601 >50 0.11682737735977619 2.6007805263376316 >100 0.026880635498702548 1.5570279831239167 >500 0.004135482384415776 1.001025830917871 >1k 5.16935298051972E-4 0.19199275914500183 >5k 5.16935298051972E-4 1.3322965742981199 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7203 1.315205661793303 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1038 0.1895298454729208 No Hit GCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGC 858 0.1566633982810848 TruSeq Adapter, Index 13 (95% over 21bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 814 0.14862937785641378 No Hit GAATCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTC 775 0.14150831429818267 No Hit CCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGC 682 0.12452731658240074 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGCT 644 0.1175888443974576 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCG 574 0.10480744826729917 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCC 549 0.10024266393509973 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.651827465759553E-4 0.0 0.0 0.12215362872965704 0.0 2 3.651827465759553E-4 0.0 0.0 0.5074214263672898 0.0 3 3.651827465759553E-4 0.0 0.0 0.7453379857615247 0.0 4 3.651827465759553E-4 0.0 0.0 1.0064436495633327 0.0 5 3.651827465759553E-4 0.0 0.0 1.7349832289823635 0.0 6 3.651827465759553E-4 0.0 0.0 2.2986427983223505 0.0 7 3.651827465759553E-4 0.0 0.0 2.7987605697581213 0.0 8 3.651827465759553E-4 0.0 0.0 3.5446463296395097 0.0 9 3.651827465759553E-4 0.0 0.0 3.8745889411708854 0.0 10 3.651827465759553E-4 0.0 0.0 4.679269123251003 0.0 11 3.651827465759553E-4 0.0 0.0 5.592408581064179 0.0 12 3.651827465759553E-4 0.0 0.0 6.442188832346427 0.0 13 3.651827465759553E-4 0.0 0.0 6.828369586850499 0.0 14 3.651827465759553E-4 0.0 0.0 7.014977970350813 0.0 15 3.651827465759553E-4 0.0 0.0 7.278457322005364 0.0 16 3.651827465759553E-4 0.0 0.0 7.731101336386261 0.0 17 3.651827465759553E-4 0.0 0.0 8.257694856948788 0.0 18 3.651827465759553E-4 0.0 0.0 8.852942733867597 0.0 19 5.477741198639329E-4 0.0 0.0 9.248253057036067 0.0 20 5.477741198639329E-4 0.0 0.0 9.662187700279912 0.0 21 5.477741198639329E-4 0.0 0.0 10.121405004099177 0.0 22 5.477741198639329E-4 0.0 0.0 10.642520783463064 0.0 23 5.477741198639329E-4 0.0 0.0 11.13679563095362 0.0 24 5.477741198639329E-4 0.0 0.0 11.543244027892658 0.0 25 5.477741198639329E-4 0.0 0.0 11.902949033269975 0.0 26 5.477741198639329E-4 0.0 0.0 12.236178289520533 0.0 27 5.477741198639329E-4 0.0 0.0 12.58949259683277 0.0 28 5.477741198639329E-4 0.0 0.0 12.951753881436117 0.0 29 5.477741198639329E-4 0.0 0.0 13.324240282943592 0.0 30 7.303654931519105E-4 0.0 0.0 13.770311007886122 0.0 31 7.303654931519105E-4 0.0 0.0 14.16945574989364 0.0 32 7.303654931519105E-4 0.0 0.0 14.536647001575764 0.0 33 7.303654931519105E-4 0.0 0.0 14.883205428076344 0.0 34 7.303654931519105E-4 0.0 0.0 15.23305049929611 0.0 35 7.303654931519105E-4 0.0 0.0 15.598781019991929 0.0 36 7.303654931519105E-4 0.0 0.0 15.966520045793917 0.0 37 9.129568664398882E-4 0.0 0.0 16.348683790085655 0.0 38 9.129568664398882E-4 0.0 0.0 16.736690458322606 0.0 39 9.129568664398882E-4 0.0 0.0 17.133278921104093 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACTA 35 1.2103737E-7 45.000004 9 CGTGCTA 20 7.030047E-4 45.000004 29 GCGAATG 20 7.030047E-4 45.000004 1 ATTACGA 20 7.030047E-4 45.000004 25 AGGCGAT 30 2.1634114E-6 45.000004 30 TCGATCA 25 3.888121E-5 45.000004 17 CATTACG 20 7.030047E-4 45.000004 24 TAGCACG 25 3.888121E-5 45.000004 1 TACGACG 20 7.030047E-4 45.000004 1 TCCACGT 20 7.030047E-4 45.000004 19 TCGTACA 25 3.888121E-5 45.000004 34 CGTTTAG 20 7.030047E-4 45.000004 11 TGTAACG 45 3.8380676E-10 45.0 1 CGTTTTT 3365 0.0 43.93016 1 CGAATAT 140 0.0 41.785717 14 TCACGAC 45 1.9252184E-8 40.0 25 CTCACGA 45 1.9252184E-8 40.0 24 ACGATAG 45 1.9252184E-8 40.0 1 CGTTATT 525 0.0 39.857143 1 TACGGTT 75 0.0 39.0 33 >>END_MODULE