SRR2936035.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936035.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	971605
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11949	1.2298207604942337	No Hit
GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	2472	0.25442438027799363	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCC	1794	0.1846429361726216	No Hit
CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT	1647	0.1695133310347312	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1380	0.14203302782509353	No Hit
CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	1122	0.11547902697083691	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTAGCG	30	2.165154E-6	45.000004	1
GTATGCG	25	3.8903578E-5	45.000004	1
GATGCGA	30	2.165154E-6	45.000004	11
TGCCGGT	25	3.8903578E-5	45.000004	36
ACGCAAA	20	7.0327485E-4	45.0	37
ATCGTCG	20	7.0327485E-4	45.0	24
TAGGCGT	20	7.0327485E-4	45.0	2
CGTTATT	810	0.0	44.166668	1
CGTTTTT	6030	0.0	43.208958	1
TCGTAAG	60	3.6379788E-12	41.250004	1
CGTAAGG	140	0.0	40.178574	2
TGCGAAG	85	0.0	39.705883	1
TTACGCG	40	3.4574805E-7	39.375	1
TTGTGCG	75	0.0	39.0	1
TAACGGG	320	0.0	38.671875	3
TATACGA	35	6.247292E-6	38.57143	43
TACGGGA	585	0.0	37.69231	4
TAGCGTA	30	1.1397918E-4	37.500004	14
CGGTCTA	30	1.1397918E-4	37.500004	31
CACGGGC	145	0.0	37.241383	4