##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936032.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 671014 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.004825532701254 33.0 31.0 34.0 30.0 34.0 2 32.11962343557661 33.0 31.0 34.0 30.0 34.0 3 32.022188806790915 33.0 31.0 34.0 30.0 34.0 4 35.713545469990194 37.0 35.0 37.0 33.0 37.0 5 31.94441844730512 37.0 35.0 37.0 0.0 37.0 6 33.784901656299276 37.0 35.0 37.0 17.0 37.0 7 35.48364117589201 37.0 35.0 37.0 32.0 37.0 8 35.7369712107348 37.0 35.0 37.0 35.0 37.0 9 37.72231875937015 39.0 37.0 39.0 35.0 39.0 10 37.297399160077134 39.0 37.0 39.0 34.0 39.0 11 37.26155788105763 39.0 37.0 39.0 34.0 39.0 12 37.23774168646258 39.0 37.0 39.0 34.0 39.0 13 37.17251651977455 39.0 37.0 39.0 34.0 39.0 14 38.320638615587754 40.0 38.0 41.0 33.0 41.0 15 38.47281576837443 40.0 38.0 41.0 34.0 41.0 16 38.46203804987675 40.0 38.0 41.0 34.0 41.0 17 38.45540927611049 40.0 38.0 41.0 34.0 41.0 18 38.32290384403306 40.0 38.0 41.0 34.0 41.0 19 38.132363855299594 40.0 37.0 41.0 34.0 41.0 20 38.104152819464275 40.0 36.0 41.0 34.0 41.0 21 38.0629822924708 40.0 36.0 41.0 34.0 41.0 22 38.12867689794848 40.0 36.0 41.0 34.0 41.0 23 38.14228168115717 40.0 36.0 41.0 34.0 41.0 24 38.11307662731329 40.0 36.0 41.0 34.0 41.0 25 37.85195688912601 40.0 36.0 41.0 34.0 41.0 26 37.889871150229354 40.0 36.0 41.0 34.0 41.0 27 37.8689416316202 40.0 36.0 41.0 34.0 41.0 28 37.812462929238436 40.0 36.0 41.0 34.0 41.0 29 37.7580199518937 40.0 36.0 41.0 33.0 41.0 30 37.58329483438497 40.0 35.0 41.0 33.0 41.0 31 37.509138408438574 40.0 35.0 41.0 33.0 41.0 32 37.32441648013305 40.0 35.0 41.0 33.0 41.0 33 37.134585865570614 40.0 35.0 41.0 32.0 41.0 34 36.90922693118176 40.0 35.0 41.0 31.0 41.0 35 36.823303239574734 40.0 35.0 41.0 31.0 41.0 36 36.70768121082421 40.0 35.0 41.0 31.0 41.0 37 36.61774269985425 40.0 35.0 41.0 30.0 41.0 38 36.48214940373823 40.0 35.0 41.0 30.0 41.0 39 36.397987225303794 40.0 35.0 41.0 30.0 41.0 40 36.33333134629084 39.0 35.0 41.0 30.0 41.0 41 36.23319930731699 39.0 35.0 41.0 29.0 41.0 42 36.21258274790094 39.0 35.0 41.0 30.0 41.0 43 36.13378111335978 39.0 35.0 41.0 29.0 41.0 44 36.08406083926714 39.0 35.0 41.0 29.0 41.0 45 36.076441028056045 39.0 35.0 41.0 29.0 41.0 46 35.97517041373205 39.0 35.0 41.0 29.0 41.0 47 35.892021626970525 39.0 35.0 41.0 28.0 41.0 48 35.84528191662171 39.0 35.0 41.0 28.0 41.0 49 35.821374814832474 39.0 35.0 41.0 28.0 41.0 50 35.70910741057563 39.0 35.0 41.0 28.0 41.0 51 34.713980632296796 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 18.0 9 26.0 10 23.0 11 16.0 12 12.0 13 11.0 14 23.0 15 20.0 16 33.0 17 80.0 18 173.0 19 365.0 20 685.0 21 1174.0 22 1776.0 23 2734.0 24 4063.0 25 6371.0 26 8580.0 27 9351.0 28 9364.0 29 9327.0 30 10228.0 31 12540.0 32 16437.0 33 23678.0 34 38214.0 35 48525.0 36 48746.0 37 75816.0 38 126560.0 39 215889.0 40 156.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.658594306527135 20.115675678897908 24.567147630302795 13.658582384272162 2 34.65874035415059 25.61466675807062 24.057322201921274 15.669270685857523 3 28.81698444443782 24.94657339489191 30.128730548095866 16.107711612574402 4 26.55220308369125 24.44986244698322 31.726759799348446 17.27117466997708 5 22.35705961425544 35.13980334240418 26.024941357408338 16.478195685932036 6 23.866715150503566 33.03001129633659 28.970334449057695 14.13293910410215 7 75.99662600184199 5.197507056484663 14.538593829636937 4.267273112036411 8 77.15695946731364 5.997490365327699 12.417624669529994 4.427925497828659 9 71.74947169507641 6.902389517953425 13.990319128960053 7.357819658010116 10 37.29609218287547 26.217932859821108 22.302515297743415 14.183459659560011 11 27.5924198302867 24.11887084323129 30.244227393169144 18.044481933312866 12 25.13524307987613 21.239050153946117 33.72373750771221 19.901969258465545 13 22.970459632734936 23.537362856810738 35.52712760091444 17.96504990953989 14 19.42314169301982 26.450565860026764 34.24533616288185 19.88095628407157 15 18.21258572846468 25.20319993323537 37.65867776231197 18.925536575987984 16 21.997007514001197 24.805294673434535 33.315549302995166 19.8821485095691 17 21.91504201104597 25.014679276438343 31.61469060258057 21.455588109935114 18 22.313990468157147 24.26268304387092 33.35384954710334 20.069476940868597 19 21.628758863451434 26.428211631948066 31.35672281055239 20.586306694048112 20 22.42695383404817 26.773062857108794 32.296345530793694 18.503637778049338 21 22.113249500010433 26.67470425356252 33.50794469265917 17.704101553767877 22 20.797181578923837 23.463891960525412 34.0158327546072 21.72309370594354 23 19.856515661372192 25.59454795279979 33.197966063301216 21.350970322526802 24 20.99866768800651 25.486055432524505 32.47443421448733 21.040842664981653 25 20.1295353003067 27.58914121016849 30.755841159796965 21.525482329727843 26 19.135070207178988 27.431767444494454 31.81647476803763 21.616687580288936 27 20.5882440604816 26.40049238913048 31.829142163948887 21.182121386439032 28 18.64640678137863 26.75771295382809 32.673684900762126 21.922195364031154 29 20.025066541085582 26.586479566745254 31.51856742184217 21.869886470326996 30 20.18020488395175 26.48707776588864 31.498895701132913 21.833821649026696 31 21.831735254406016 26.013019102433034 29.577773340049536 22.57747230311141 32 21.946039873981764 27.87438116045269 29.795801577910446 20.3837773876551 33 21.692990012130895 25.3693663619537 30.498171424143163 22.439472201772244 34 19.55473358230976 26.863671994921116 30.854348791530427 22.727245631238695 35 19.244009812015843 26.940272483137463 30.878938442417 22.936779262429695 36 22.513539210806332 27.103309319924772 29.019811807205215 21.363339662063684 37 20.99643226519864 27.41999421770634 29.712494821270496 21.87107869582453 38 21.20119699439952 27.25263556349048 29.697293946176977 21.84887349593302 39 21.194341697788722 26.26770827434301 29.735743218472344 22.802206809395926 40 21.35544116814254 24.56073941825357 31.789649694343186 22.2941697192607 41 19.970075140011982 25.445519765608466 30.005484237288645 24.57892085709091 42 21.209840629256618 25.056109112477532 31.66416796072809 22.069882297537756 43 22.34349804922103 25.447457132041958 29.936931271180633 22.272113547556387 44 21.565272855707928 25.297832832101864 29.56585108507423 23.571043227115975 45 20.652922293722632 25.66503828534129 28.598509122015336 25.083530298920735 46 21.234281251955995 26.2128659014566 29.657652448384088 22.895200398203315 47 19.147588574903057 25.982617352246002 32.01125460869669 22.85853946415425 48 20.236835595084454 25.594995037361368 30.874616624988448 23.29355274256573 49 21.580473730801444 24.05598094823655 31.864908928874808 22.4986363920872 50 20.214928451567328 24.123043632472648 31.39442694191179 24.267600974048232 51 19.370236686566898 24.466404575761462 29.411159826769634 26.75219891090201 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 277.0 1 673.0 2 1069.0 3 6909.5 4 12750.0 5 8358.5 6 3967.0 7 3829.5 8 3692.0 9 3681.0 10 3670.0 11 3589.0 12 3508.0 13 3507.5 14 3507.0 15 3309.0 16 3111.0 17 3071.5 18 3032.0 19 2938.5 20 2845.0 21 3141.5 22 3438.0 23 3550.5 24 3663.0 25 4510.5 26 5841.0 27 6324.0 28 7558.5 29 8793.0 30 10466.0 31 12139.0 32 13959.5 33 15780.0 34 17447.5 35 19115.0 36 21049.0 37 22983.0 38 24815.5 39 26648.0 40 29352.5 41 32057.0 42 35939.0 43 39821.0 44 43388.0 45 46955.0 46 56665.5 47 66376.0 48 65651.5 49 64927.0 50 62596.5 51 60266.0 52 53027.5 53 45789.0 54 40255.0 55 34721.0 56 31626.5 57 28532.0 58 26812.0 59 25092.0 60 21519.0 61 17946.0 62 15904.5 63 13863.0 64 12212.0 65 10561.0 66 8795.0 67 7029.0 68 5845.5 69 4662.0 70 3683.5 71 2705.0 72 2210.5 73 1716.0 74 1508.5 75 941.5 76 582.0 77 422.5 78 263.0 79 182.0 80 101.0 81 74.0 82 47.0 83 34.5 84 22.0 85 13.5 86 5.0 87 4.0 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 671014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.599225229624764 #Duplication Level Percentage of deduplicated Percentage of total 1 74.98515762300829 28.193838303464027 2 10.126955272625686 7.615313443715784 3 3.776291098435876 4.259568586281527 4 2.0558039133105694 3.0918653745803226 5 1.3086954229890915 2.4602966982972947 6 0.9138182053141393 2.0615313912322684 7 0.6872572775770418 1.8088238819222553 8 0.5585180400270023 1.679987646542707 9 0.4749935515037084 1.607345057304657 >10 4.960728338488725 38.688542114728776 >50 0.11474179892624983 2.7523099719354924 >100 0.031805621366247615 2.1613398793638305 >500 0.003220822416835202 0.9465512162531189 >1k 0.001610411208417601 1.5674936581322636 >5k 4.0260280210440027E-4 1.1051927762456453 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7301 1.0880547946838666 No Hit GAATCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTC 3138 0.46765045140637906 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCG 2690 0.40088582354466523 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGC 2329 0.3470866479685968 No Hit GCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 2198 0.32756395544653316 No Hit CCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 975 0.14530248251154224 No Hit CTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGCT 948 0.14127872145737647 TruSeq Adapter, Index 13 (95% over 22bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 850 0.12667395911262655 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCC 797 0.11877546519148631 No Hit GAACTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCT 786 0.11713615513238174 No Hit TCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 751 0.11192016858068536 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4902818719132537E-4 0.0 0.0 0.1463456798218815 0.0 2 1.4902818719132537E-4 0.0 0.0 0.834110763709848 0.0 3 2.9805637438265074E-4 0.0 0.0 1.162866944653912 0.0 4 2.9805637438265074E-4 0.0 0.0 1.6433338201587449 0.0 5 2.9805637438265074E-4 0.0 0.0 3.084436390298861 0.0 6 2.9805637438265074E-4 0.0 0.0 3.962063384668576 0.0 7 2.9805637438265074E-4 0.0 0.0 4.790958161826728 0.0 8 4.470845615739761E-4 0.0 0.0 5.909861791259199 0.0 9 4.470845615739761E-4 0.0 0.0 6.349345915286417 0.0 10 4.470845615739761E-4 0.0 0.0 7.730241097801238 0.0 11 5.961127487653015E-4 0.0 0.0 9.148095270739507 0.0 12 5.961127487653015E-4 0.0 0.0 10.559243175254167 0.0 13 5.961127487653015E-4 0.0 0.0 11.031513500463477 0.0 14 5.961127487653015E-4 0.0 0.0 11.251181048383492 0.0 15 5.961127487653015E-4 0.0 0.0 11.629712643849457 0.0 16 5.961127487653015E-4 0.0 0.0 12.311665628436963 0.0 17 5.961127487653015E-4 0.0 0.0 13.12208091038339 0.0 18 5.961127487653015E-4 0.0 0.0 14.038008148861275 0.0 19 5.961127487653015E-4 0.0 0.0 14.703419004670543 0.0 20 5.961127487653015E-4 0.0 0.0 15.28000906091378 0.0 21 5.961127487653015E-4 0.0 0.0 15.998473951363161 0.0 22 5.961127487653015E-4 0.0 0.0 16.77655011668907 0.0 23 5.961127487653015E-4 0.0 0.0 17.530334687502794 0.0 24 5.961127487653015E-4 0.0 0.0 18.112587814859303 0.0 25 5.961127487653015E-4 0.0 0.0 18.66518433296474 0.0 26 5.961127487653015E-4 0.0 0.0 19.194383425681135 0.0 27 5.961127487653015E-4 0.0 0.0 19.718515560033026 0.0 28 5.961127487653015E-4 0.0 0.0 20.24652242725189 0.0 29 5.961127487653015E-4 0.0 0.0 20.789730169564272 0.0 30 5.961127487653015E-4 0.0 0.0 21.45782353274298 0.0 31 7.451409359566268E-4 0.0 0.0 22.022640362198107 0.0 32 7.451409359566268E-4 0.0 0.0 22.56957380919027 0.0 33 7.451409359566268E-4 0.0 0.0 23.103988888458364 0.0 34 7.451409359566268E-4 0.0 0.0 23.638403967726457 0.0 35 7.451409359566268E-4 0.0 0.0 24.19651452875797 0.0 36 7.451409359566268E-4 0.0 0.0 24.738828101947202 0.0 37 7.451409359566268E-4 0.0 0.0 25.275180547648784 0.0 38 7.451409359566268E-4 0.0 0.0 25.84953518108415 0.0 39 7.451409359566268E-4 0.0 0.0 26.565317564164086 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACG 20 7.0311845E-4 45.000004 1 CGTGAAG 20 7.0311845E-4 45.000004 43 CGTCTAG 20 7.0311845E-4 45.000004 33 TATTGCG 20 7.0311845E-4 45.000004 1 CGTAGTC 20 7.0311845E-4 45.000004 3 GTAGACG 40 6.8084773E-9 45.000004 1 CACGTCT 20 7.0311845E-4 45.000004 40 CGTTATT 385 0.0 43.246754 1 CGTTTTT 3515 0.0 42.63158 1 ACGGGTC 75 0.0 42.0 5 CCCGTCG 40 3.4553523E-7 39.375004 40 CGCACGG 40 3.4553523E-7 39.375004 2 GCGCATT 35 6.2444014E-6 38.57143 21 CCGTCGA 35 6.2444014E-6 38.57143 41 TTGAGCG 70 0.0 38.57143 1 CGTCGAA 35 6.2444014E-6 38.57143 42 CACGGGA 235 0.0 38.29787 4 GCGATAA 65 9.094947E-12 38.07692 9 CGATGAA 315 0.0 37.857143 19 GTTTGCG 60 1.546141E-10 37.499996 1 >>END_MODULE