SRR2936031.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936031.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	885976
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5917	0.6678510478839156	No Hit
GAATCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTC	2527	0.2852221730611213	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCG	1824	0.20587465123208756	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGC	1715	0.19357183490297705	No Hit
GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	1533	0.1730295177295999	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCGGT	20	7.0324086E-4	45.000004	36
TATCGAT	20	7.0324086E-4	45.000004	42
ATTCGCG	25	3.89008E-5	45.0	1
GCTAACG	45	3.8380676E-10	45.0	1
AGTCGAT	25	3.89008E-5	45.0	22
CGTTATT	455	0.0	43.021976	1
CGTTTTT	3080	0.0	42.80844	1
TCGACGG	85	0.0	39.705883	2
GCGAGAC	40	3.4570257E-7	39.375004	21
GCGATAT	40	3.4570257E-7	39.375004	9
CGTTAGG	115	0.0	39.130432	2
CTAACGG	75	0.0	39.0	2
CGATGAA	320	0.0	38.67188	19
GAACGTA	35	6.2466697E-6	38.571426	20
CAGTACG	35	6.2466697E-6	38.571426	1
TACGGGT	95	0.0	37.894737	4
GTCGATC	30	1.13971066E-4	37.500004	23
ATCCGGT	30	1.13971066E-4	37.500004	32
GCGATCA	60	1.546141E-10	37.500004	9
CTCGACG	30	1.13971066E-4	37.500004	1