##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936026.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 937008 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10762554855455 33.0 31.0 34.0 30.0 34.0 2 32.22167046599389 34.0 31.0 34.0 30.0 34.0 3 32.15790580229838 33.0 31.0 34.0 30.0 34.0 4 35.774394668988954 37.0 35.0 37.0 35.0 37.0 5 31.943009024469376 37.0 35.0 37.0 0.0 37.0 6 33.80387147174837 37.0 35.0 37.0 17.0 37.0 7 35.5007406553626 37.0 35.0 37.0 32.0 37.0 8 35.7708461400543 37.0 35.0 37.0 35.0 37.0 9 37.74769799190615 39.0 38.0 39.0 35.0 39.0 10 37.36293500162218 39.0 37.0 39.0 34.0 39.0 11 37.31920752010655 39.0 37.0 39.0 34.0 39.0 12 37.224324658914334 39.0 37.0 39.0 34.0 39.0 13 37.15575534040264 39.0 37.0 39.0 34.0 39.0 14 38.25215579802947 40.0 38.0 41.0 33.0 41.0 15 38.43651921861927 40.0 38.0 41.0 34.0 41.0 16 38.40282687020815 40.0 38.0 41.0 34.0 41.0 17 38.42415646397896 40.0 38.0 41.0 34.0 41.0 18 38.31381375612588 40.0 37.0 41.0 34.0 41.0 19 38.17892376585899 40.0 37.0 41.0 34.0 41.0 20 38.23942805184161 40.0 37.0 41.0 34.0 41.0 21 38.136190939671806 40.0 37.0 41.0 34.0 41.0 22 38.22946122124891 40.0 37.0 41.0 34.0 41.0 23 38.24839595819886 40.0 37.0 41.0 34.0 41.0 24 38.204205300274914 40.0 36.0 41.0 34.0 41.0 25 37.93415531137408 40.0 36.0 41.0 34.0 41.0 26 38.00634786469272 40.0 36.0 41.0 34.0 41.0 27 37.983402489626556 40.0 36.0 41.0 34.0 41.0 28 37.925095623516555 40.0 36.0 41.0 34.0 41.0 29 37.8811824445469 40.0 36.0 41.0 34.0 41.0 30 37.695372931714566 40.0 36.0 41.0 33.0 41.0 31 37.64790802213001 40.0 36.0 41.0 33.0 41.0 32 37.564222503970086 40.0 35.0 41.0 33.0 41.0 33 37.45127789730717 40.0 35.0 41.0 33.0 41.0 34 37.33982100472995 40.0 35.0 41.0 33.0 41.0 35 37.28735293615423 40.0 35.0 41.0 33.0 41.0 36 37.18191306797807 40.0 35.0 41.0 32.0 41.0 37 37.13678218328979 40.0 35.0 41.0 32.0 41.0 38 37.00655490668169 40.0 35.0 41.0 32.0 41.0 39 36.9120701210662 39.0 35.0 41.0 32.0 41.0 40 36.853024734047096 39.0 35.0 41.0 31.0 41.0 41 36.72712933080614 39.0 35.0 41.0 31.0 41.0 42 36.714483761077815 39.0 35.0 41.0 31.0 41.0 43 36.66376914604785 39.0 35.0 41.0 31.0 41.0 44 36.60763728804877 39.0 35.0 41.0 31.0 41.0 45 36.56817124293496 39.0 35.0 41.0 31.0 41.0 46 36.47136097023718 39.0 35.0 41.0 31.0 41.0 47 36.418149044618616 39.0 35.0 41.0 31.0 41.0 48 36.35435556580093 39.0 35.0 41.0 31.0 41.0 49 36.31540178952581 39.0 35.0 41.0 31.0 41.0 50 36.20895766098048 39.0 35.0 41.0 31.0 41.0 51 35.22753914587709 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 24.0 9 57.0 10 45.0 11 39.0 12 22.0 13 18.0 14 40.0 15 38.0 16 65.0 17 147.0 18 275.0 19 465.0 20 799.0 21 1125.0 22 1787.0 23 2745.0 24 4093.0 25 6026.0 26 7742.0 27 9021.0 28 10148.0 29 11246.0 30 13418.0 31 16867.0 32 22415.0 33 34084.0 34 58215.0 35 70351.0 36 71198.0 37 111348.0 38 181398.0 39 301512.0 40 233.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.385123712924546 20.589685466933048 24.672574833939517 12.352615986202894 2 34.11827860594573 23.57471867902942 24.88559329269334 17.421409422331507 3 32.866421631405494 23.21890528149173 27.299233304304764 16.61543978279801 4 28.705197821149874 24.570761402250568 27.367855984153817 19.35618479244574 5 22.126491982992675 37.39818656831105 23.389127947680276 17.086193501016 6 25.324863821867048 33.50110137800318 26.40788552499018 14.766149275139592 7 78.87862216758022 6.314140327510544 10.153488550791455 4.653748954117788 8 80.58309000563496 5.6171345388726674 9.552213001383125 4.24756245410925 9 74.51323788057306 7.290652801256766 12.104805935488278 6.091303382681898 10 40.223669381691515 25.89486962758055 19.142739442993015 14.738721547734917 11 30.15000939159538 26.030087256458856 25.300104161330534 18.519799190615235 12 27.436051773303966 22.854660792650648 30.759929477656538 18.949357956388845 13 24.859019346686477 23.374293495893312 32.11541416935608 19.651272988064136 14 21.17996858084456 26.01696036746751 32.58083175383775 20.222239297850177 15 20.290008196301418 25.068302511824875 34.66053651623039 19.981152775643324 16 24.948239502757712 24.362225295835255 31.264300838413334 19.4252343629937 17 24.793064733705585 24.44152024315694 29.095589365298906 21.66982565783857 18 25.396688181957895 24.113454741048102 31.00261683998429 19.487240237009715 19 24.674709287434045 26.091346071751786 28.418647439509588 20.815297201304578 20 24.751015999863395 26.788992196438024 28.951727199767774 19.508264603930808 21 24.667131977528474 26.316637638099138 30.696002595495447 18.320227788876934 22 23.845047214111297 23.877170739203933 30.783515188771066 21.4942668579137 23 21.99308863958472 25.006296637808855 31.17358656489592 21.827028157710497 24 22.142607106876355 25.597540255792907 30.953631132284894 21.306221505045848 25 23.040358246674522 26.232326725065313 28.983850724860403 21.743464303399758 26 21.37302989942455 25.912265423560953 28.767950753888975 23.94675392312552 27 21.000354319280092 26.21834605467616 30.731968136878233 22.049331489165514 28 20.03462083568123 26.62741406690231 30.171567371890102 23.166397725526355 29 21.239626556016596 26.600733398220722 30.1383766200502 22.02126342571248 30 22.76554735925414 26.201056981370492 29.85171951573519 21.181676143640182 31 24.56745299933405 25.77704779468265 28.457921383808888 21.19757782217441 32 24.50736813346311 26.02432423202363 28.094103785666718 21.37420384884654 33 23.562445571435887 26.023683895975275 28.096131516486516 22.317739016102315 34 21.795118077967317 25.479078086846645 30.095687550159656 22.630116285026382 35 21.53770298652733 27.095926608951043 29.177765824838207 22.188604579683417 36 22.99959018492905 28.226226456977955 27.4859979850759 21.288185373017093 37 21.98817939654731 27.71406434096614 28.75044823523385 21.5473080272527 38 22.89991120673463 27.478100507146152 28.106803783959155 21.515184502160068 39 21.760753376705427 26.037130952990793 29.076912897221796 23.12520277308198 40 23.993071563956764 24.690824411317728 28.76955159400987 22.54655243071564 41 20.994057681471237 26.062210781551492 28.161445793419055 24.78228574355822 42 21.82766849375886 25.60693185116883 29.788112801598277 22.777286853474035 43 22.20002390587914 24.95389580451821 29.86580690879907 22.980273380803578 44 22.0306550210884 24.903095811348464 28.887800317606683 24.178448849956457 45 21.67761641309359 25.03639243208169 28.083538240868812 25.20245291395591 46 22.239831463552072 25.664028482147433 28.747460000341512 23.348680053958983 47 21.018390451308846 25.910878028789508 30.025357307514984 23.045374212386662 48 20.937708109215716 26.30116285026382 30.097822003654183 22.663307036866282 49 22.49020285846012 24.841516828031352 30.678179908816144 21.990100404692384 50 20.834400560080596 25.241940303604665 30.501020268770386 23.422638867544354 51 20.668233355531648 24.895411778768164 29.152579273602786 25.283775592097403 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 551.0 1 1072.5 2 1594.0 3 6277.5 4 10961.0 5 6930.0 6 2899.0 7 2761.0 8 2623.0 9 2692.0 10 2761.0 11 2722.5 12 2684.0 13 2637.5 14 2591.0 15 2495.0 16 2399.0 17 2495.0 18 2591.0 19 2656.5 20 2722.0 21 3052.0 22 3382.0 23 4053.5 24 4725.0 25 5575.5 26 7716.5 27 9007.0 28 10864.0 29 12721.0 30 15243.0 31 17765.0 32 19652.0 33 21539.0 34 24806.0 35 28073.0 36 29708.0 37 31343.0 38 35059.0 39 38775.0 40 41246.5 41 43718.0 42 47852.0 43 51986.0 44 55990.0 45 59994.0 46 66876.5 47 73759.0 48 77582.5 49 81406.0 50 80968.5 51 80531.0 52 72502.0 53 64473.0 54 60284.5 55 56096.0 56 52523.0 57 48950.0 58 46382.0 59 43814.0 60 39762.0 61 35710.0 62 31581.0 63 27452.0 64 24435.5 65 21419.0 66 17910.5 67 14402.0 68 12221.0 69 10040.0 70 8103.5 71 6167.0 72 5078.5 73 3990.0 74 3192.5 75 1828.0 76 1261.0 77 964.5 78 668.0 79 501.5 80 335.0 81 214.5 82 94.0 83 113.0 84 132.0 85 76.5 86 21.0 87 30.5 88 40.0 89 28.0 90 16.0 91 9.5 92 3.0 93 1.5 94 0.0 95 1.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 937008.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.350592252719107 #Duplication Level Percentage of deduplicated Percentage of total 1 72.48291530404364 21.99899407681402 2 10.014828204001859 6.079119346013832 3 3.964820348868562 3.610039372913798 4 2.1716445767824193 2.6364279627100786 5 1.3947010156692727 2.116500092051565 6 1.0001810409513523 1.8213652171688792 7 0.7202706134063132 1.5302447789377622 8 0.5861896772397623 1.4232963101325635 9 0.5060841833938201 1.382395922616254 >10 6.8062979102877454 48.158924046806675 >50 0.31207573860263726 5.675207136042882 >100 0.0360636612680258 1.931290845201487 >500 0.002856527625190046 0.6314814968289543 >1k 7.141319062975115E-4 0.2917364320342449 >5k 3.570659531487558E-4 0.7129769637270791 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6579 0.7021284770247426 No Hit GCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 1683 0.17961426156446902 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1009 0.10768317879890034 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.403360483581784E-4 0.0 0.0 0.10352099448457217 0.0 2 6.403360483581784E-4 0.0 0.0 0.476196574629032 0.0 3 6.403360483581784E-4 0.0 0.0 0.6718192374024555 0.0 4 6.403360483581784E-4 0.0 0.0 0.928593992794085 0.0 5 6.403360483581784E-4 0.0 0.0 1.6579367518740502 0.0 6 6.403360483581784E-4 0.0 0.0 2.2731929716715333 0.0 7 6.403360483581784E-4 0.0 0.0 2.815130713932005 0.0 8 6.403360483581784E-4 0.0 0.0 3.60669279237744 0.0 9 6.403360483581784E-4 0.0 0.0 3.965601147482199 0.0 10 6.403360483581784E-4 0.0 0.0 4.706469955432611 0.0 11 6.403360483581784E-4 0.0 0.0 5.673163943104008 0.0 12 6.403360483581784E-4 0.0 0.0 6.465152912248348 0.0 13 6.403360483581784E-4 0.0 0.0 6.816804125471714 0.0 14 6.403360483581784E-4 0.0 0.0 7.011893174871506 0.0 15 6.403360483581784E-4 0.0 0.0 7.268667930263136 0.0 16 6.403360483581784E-4 0.0 0.0 7.735899800215153 0.0 17 6.403360483581784E-4 0.0 0.0 8.271861072690948 0.0 18 6.403360483581784E-4 0.0 0.0 8.834716459197788 0.0 19 6.403360483581784E-4 0.0 0.0 9.236954220241449 0.0 20 6.403360483581784E-4 0.0 0.0 9.643567610948892 0.0 21 6.403360483581784E-4 0.0 0.0 10.140788552499018 0.0 22 6.403360483581784E-4 0.0 0.0 10.642705291737103 0.0 23 6.403360483581784E-4 0.0 0.0 11.116767412871608 0.0 24 6.403360483581784E-4 0.0 0.0 11.523487526253778 0.0 25 6.403360483581784E-4 0.0 0.0 11.89402865290371 0.0 26 6.403360483581784E-4 0.0 0.0 12.247814319621604 0.0 27 7.470587230845415E-4 0.0 0.0 12.62529242012875 0.0 28 8.537813978109045E-4 0.0 0.0 12.986015060703858 0.0 29 8.537813978109045E-4 0.0 0.0 13.400312483991598 0.0 30 8.537813978109045E-4 0.0 0.0 13.917383843040827 0.0 31 9.605040725372676E-4 0.0 0.0 14.321862780253744 0.0 32 9.605040725372676E-4 0.0 0.0 14.725381213394122 0.0 33 9.605040725372676E-4 0.0 0.0 15.10840889298704 0.0 34 9.605040725372676E-4 0.0 0.0 15.529963458156173 0.0 35 0.0010672267472636306 0.0 0.0 15.977344910609087 0.0 36 0.0010672267472636306 0.0 0.0 16.380329730375834 0.0 37 0.0010672267472636306 0.0 0.0 16.775417072212832 0.0 38 0.0010672267472636306 0.0 0.0 17.22994894387241 0.0 39 0.0010672267472636306 0.0 0.0 17.910305995252976 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTT 25 3.8902526E-5 45.0 12 TATCTCG 25 3.8902526E-5 45.0 23 TATCGAC 20 7.032618E-4 45.0 30 CGTTTTT 2545 0.0 41.905697 1 TAGCACG 50 1.0804797E-9 40.5 1 TTGCACG 45 1.927583E-8 40.000004 1 TCGAAAG 45 1.927583E-8 40.000004 1 ACAACGA 220 0.0 39.886364 13 CCTCACG 40 3.4573168E-7 39.375 42 CGTTATT 350 0.0 39.214287 1 CACAACG 230 0.0 39.130436 12 CGTAAGG 145 0.0 38.793102 2 TGCACGG 210 0.0 38.57143 2 ATATCGT 35 6.2470535E-6 38.571426 33 ACGTAAG 35 6.2470535E-6 38.571426 1 GCGTAAG 95 0.0 37.894737 1 CGACAAT 30 1.13976086E-4 37.500004 20 AAAGTCG 30 1.13976086E-4 37.500004 33 GCCGACC 30 1.13976086E-4 37.500004 14 TATTCGC 30 1.13976086E-4 37.500004 26 >>END_MODULE