##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936022.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 799467 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14782473823185 33.0 31.0 34.0 30.0 34.0 2 32.276694347609094 34.0 31.0 34.0 30.0 34.0 3 32.16217805112656 33.0 31.0 34.0 30.0 34.0 4 35.82591901854611 37.0 35.0 37.0 35.0 37.0 5 32.16026677774067 37.0 35.0 37.0 0.0 37.0 6 33.96063001975066 37.0 35.0 37.0 17.0 37.0 7 35.607240824199124 37.0 35.0 37.0 32.0 37.0 8 35.85959145280543 37.0 35.0 37.0 35.0 37.0 9 37.85294202262257 39.0 38.0 39.0 35.0 39.0 10 37.50338287884303 39.0 37.0 39.0 35.0 39.0 11 37.417494405647766 39.0 37.0 39.0 35.0 39.0 12 37.436944864515986 39.0 37.0 39.0 35.0 39.0 13 37.44939315819165 39.0 37.0 39.0 35.0 39.0 14 38.76456814352562 40.0 38.0 41.0 35.0 41.0 15 38.85539615769006 40.0 38.0 41.0 35.0 41.0 16 38.802136923725435 40.0 38.0 41.0 35.0 41.0 17 38.76028654090788 40.0 38.0 41.0 35.0 41.0 18 38.60626642500566 40.0 38.0 41.0 35.0 41.0 19 38.40908380208314 40.0 37.0 41.0 34.0 41.0 20 38.38280754552721 40.0 37.0 41.0 34.0 41.0 21 38.340319237692114 40.0 37.0 41.0 34.0 41.0 22 38.389296869039 40.0 37.0 41.0 34.0 41.0 23 38.376455813685865 40.0 37.0 41.0 35.0 41.0 24 38.34580664367635 40.0 37.0 41.0 34.0 41.0 25 38.13331131866606 40.0 36.0 41.0 34.0 41.0 26 38.17617237484474 40.0 37.0 41.0 34.0 41.0 27 38.13639837541762 40.0 37.0 41.0 34.0 41.0 28 38.08462763316059 40.0 36.0 41.0 34.0 41.0 29 38.07239948615765 40.0 36.0 41.0 34.0 41.0 30 37.883089608451634 40.0 36.0 41.0 34.0 41.0 31 37.81672789496002 40.0 36.0 41.0 33.0 41.0 32 37.603053034083956 40.0 36.0 41.0 33.0 41.0 33 37.384589983076225 40.0 36.0 41.0 33.0 41.0 34 37.12079798165528 40.0 36.0 41.0 32.0 41.0 35 37.02648889822844 40.0 36.0 41.0 31.0 41.0 36 36.89776188385512 40.0 36.0 41.0 31.0 41.0 37 36.79671956440979 40.0 36.0 41.0 31.0 41.0 38 36.6752048552348 40.0 35.0 41.0 30.0 41.0 39 36.564758770530865 40.0 35.0 41.0 30.0 41.0 40 36.50548803140092 40.0 35.0 41.0 30.0 41.0 41 36.40027543350757 40.0 35.0 41.0 30.0 41.0 42 36.36872941597339 40.0 35.0 41.0 30.0 41.0 43 36.284494544490265 40.0 35.0 41.0 29.0 41.0 44 36.23144670136478 39.0 35.0 41.0 29.0 41.0 45 36.23956961325483 39.0 35.0 41.0 29.0 41.0 46 36.13369032117648 39.0 35.0 41.0 29.0 41.0 47 36.06021636915595 39.0 35.0 41.0 29.0 41.0 48 36.02672280406821 39.0 35.0 41.0 28.0 41.0 49 35.99991119083089 39.0 35.0 41.0 28.0 41.0 50 35.88436545848672 39.0 35.0 41.0 28.0 41.0 51 34.93995499501543 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 13.0 9 19.0 10 27.0 11 22.0 12 13.0 13 15.0 14 12.0 15 25.0 16 41.0 17 96.0 18 186.0 19 415.0 20 799.0 21 1368.0 22 2183.0 23 3161.0 24 4785.0 25 7512.0 26 10291.0 27 11072.0 28 10671.0 29 10305.0 30 11072.0 31 13034.0 32 16396.0 33 23259.0 34 37816.0 35 52443.0 36 54985.0 37 86075.0 38 153291.0 39 287830.0 40 234.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.90095901394304 20.30315197500335 24.446412422276342 15.349476588777272 2 35.187693800994914 24.739983013682867 23.905802240742897 16.166520944579325 3 29.085378133181234 25.0330532717423 30.660427509828423 15.221141085248046 4 26.310779556879773 24.54035000819296 32.020458630562615 17.128411804364656 5 23.10114113528138 35.13340763283538 25.42806644927183 16.337384782611412 6 23.7754654038253 33.775628012163104 27.81528193158692 14.633624652424679 7 77.0283201182788 4.847354549968917 14.393714812493824 3.7306105192584558 8 78.63914332924311 5.857777744422221 11.959718162225583 3.5433607641090874 9 72.55959282872215 7.365282119211924 13.461969036870816 6.613156015195123 10 34.12561118845431 34.65183678625884 19.765293626878908 11.457258398407939 11 24.68244467876723 24.656552428055193 33.09167232668766 17.569330566489924 12 22.937532130782134 23.222972305298406 34.558024283679 19.28147128024046 13 22.254952362011192 24.10531016289603 36.04776682464692 17.59197065044586 14 18.706213014420857 28.3287490290406 33.02913065830109 19.935907298237453 15 17.738067987796867 26.32679022398673 37.47121519712508 18.463926591091315 16 20.922564658703863 26.64087448262405 33.44678391978656 18.989776938885534 17 20.536807648095543 26.1021405511422 32.967089323261625 20.393962477500637 18 21.658304845603382 24.834295849609802 34.03667693600861 19.470722368778198 19 20.504411063871306 26.903549489847613 32.28976305463515 20.302276391645936 20 23.040850966956736 26.809236653920678 33.18723599598232 16.96267638314027 21 22.080836357223 27.386871503138966 33.11068499387717 17.421607145760866 22 21.48168717407973 23.799606487822512 34.05931701996455 20.659389318133208 23 19.567912121450917 26.93507049071444 33.68531784301291 19.811699544821735 24 19.857605129417475 25.941908796735824 34.097092187670036 20.103393886176665 25 19.053944690650145 28.74264979042287 32.05410604815459 20.1492994707724 26 19.501117619614067 27.837046432185442 33.14470766147946 19.51712828672103 27 20.24836547349672 26.82499715435409 33.14595849484719 19.780678877302 28 17.931947159795214 27.071286244460374 34.863978125426065 20.13278847031835 29 19.24982519603686 25.08321168978832 35.61910622952542 20.0478568846494 30 19.743529126280386 25.882744378442133 34.785550873269315 19.588175622008166 31 21.54935725927399 26.14454380230829 31.803313957924466 20.502784980493256 32 21.37836833790513 26.93907315749118 32.78121548481676 18.901343019786935 33 21.345721587007343 26.12515588510845 31.063195854237886 21.465926673646315 34 19.78618254412002 26.89829598970314 32.65287998128753 20.662641484889306 35 20.64913248451781 25.992317381455393 32.81248631901004 20.546063815016755 36 21.761373515104438 27.81740834831206 30.9188496836017 19.5023684529818 37 21.184364082570013 27.037888993541948 32.31390413863237 19.46384278525568 38 21.25466091783651 27.26766708319418 29.995234324868942 21.482437674100368 39 21.80302626624989 26.44274247717542 30.727722345012364 21.026508911562328 40 22.00365993843398 26.011580215318457 31.283967943642455 20.70079190260511 41 21.245654917588844 26.908802989992083 30.369483668494134 21.47605842392494 42 22.72839279169747 25.718009623911932 31.181774857498805 20.371822726891793 43 22.481103034897 25.414557448900332 30.893082516226432 21.211256999976232 44 21.095179663450775 26.051857049759402 31.01341268620218 21.839550600587643 45 21.07491616289353 25.5431431191031 30.31457208365073 23.067368634352636 46 22.18002744328409 26.28538763951483 30.21613149761028 21.318453419590803 47 20.151300804160773 26.76433173601912 32.299019221556364 20.785348238263744 48 21.495321257788003 25.569535703162234 31.511744699906313 21.423398339143453 49 21.623906927990774 25.0944691900979 32.20720805236489 21.074415829546435 50 20.29977472491047 25.03067668834361 32.053855881481034 22.615692705264884 51 20.136791137095088 24.62565684387223 30.43277583690134 24.804776182131345 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 329.0 1 814.0 2 1299.0 3 8512.5 4 15726.0 5 10485.0 6 5244.0 7 5016.5 8 4789.0 9 4782.5 10 4776.0 11 4728.5 12 4681.0 13 4503.5 14 4326.0 15 4165.5 16 4005.0 17 4155.0 18 4305.0 19 4240.0 20 4175.0 21 4344.0 22 4513.0 23 5039.5 24 5566.0 25 6510.0 26 8722.5 27 9991.0 28 11647.5 29 13304.0 30 15841.5 31 18379.0 32 20495.5 33 22612.0 34 24712.0 35 26812.0 36 29624.0 37 32436.0 38 34644.0 39 36852.0 40 39978.5 41 43105.0 42 47194.0 43 51283.0 44 54037.5 45 56792.0 46 66913.0 47 77034.0 48 74532.5 49 72031.0 50 69445.0 51 66859.0 52 58650.0 53 50441.0 54 44625.0 55 38809.0 56 34465.5 57 30122.0 58 26460.0 59 22798.0 60 20976.0 61 19154.0 62 16851.0 63 14548.0 64 12347.0 65 10146.0 66 7916.0 67 5686.0 68 4499.5 69 3313.0 70 2908.5 71 2504.0 72 1850.5 73 1197.0 74 1096.5 75 733.5 76 471.0 77 410.5 78 350.0 79 224.0 80 98.0 81 97.0 82 96.0 83 70.0 84 44.0 85 26.5 86 9.0 87 7.0 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 799467.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.28592370800146 #Duplication Level Percentage of deduplicated Percentage of total 1 74.16512355453956 25.428197679854453 2 9.502757188981862 6.516216159941892 3 3.686435060471951 3.791784937135292 4 1.9996673931848965 2.7424177473646205 5 1.311115531898693 2.247640354952717 6 0.9851565170197844 2.026620070978846 7 0.7649258159562936 1.8358331717710772 8 0.6335861932336542 1.737847030692171 9 0.5453848906299331 1.6829122276471147 >10 6.250128838145565 43.97167647066704 >50 0.1183612490398654 2.5591548978797642 >100 0.031809583695291035 1.931033180728609 >500 0.0025891521612446083 0.5715614727486581 >1k 0.0025891521612446083 1.875487601615244 >5k 3.6987888017780117E-4 1.081616996022477 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8529 1.066835779337984 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCG 3499 0.43766659536916475 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTC 3203 0.40064192768431967 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGC 2907 0.36361725999947464 No Hit GCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 1656 0.20713800569629515 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 1298 0.16235817113151638 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCC 1225 0.15322708754707823 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1001 0.12520842010989822 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.254166838656254E-4 0.0 0.0 0.10356900284814757 0.0 2 6.254166838656254E-4 0.0 0.0 0.593020099641386 0.0 3 6.254166838656254E-4 0.0 0.0 0.8358068563180219 0.0 4 6.254166838656254E-4 0.0 0.0 1.1704047821861314 0.0 5 6.254166838656254E-4 0.0 0.0 2.2546271453355797 0.0 6 6.254166838656254E-4 0.0 0.0 2.910814330047394 0.0 7 6.254166838656254E-4 0.0 0.0 3.5828870985293952 0.0 8 6.254166838656254E-4 0.0 0.0 4.473355373017273 0.0 9 6.254166838656254E-4 0.0 0.0 4.841725799814126 0.0 10 6.254166838656254E-4 0.0 0.0 6.076548500438417 0.0 11 6.254166838656254E-4 0.0 0.0 7.257460282913491 0.0 12 6.254166838656254E-4 0.0 0.0 8.513547150789213 0.0 13 6.254166838656254E-4 0.0 0.0 8.920318161975416 0.0 14 6.254166838656254E-4 0.0 0.0 9.10218933364354 0.0 15 6.254166838656254E-4 0.0 0.0 9.435911676154237 0.0 16 7.505000206387506E-4 0.0 0.0 9.951755357006606 0.0 17 7.505000206387506E-4 0.0 0.0 10.590806124580501 0.0 18 7.505000206387506E-4 0.0 0.0 11.226729808735069 0.0 19 8.755833574118757E-4 0.0 0.0 11.780098490619375 0.0 20 8.755833574118757E-4 0.0 0.0 12.214137669222119 0.0 21 8.755833574118757E-4 0.0 0.0 12.727229516665478 0.0 22 8.755833574118757E-4 0.0 0.0 13.318373366255267 0.0 23 8.755833574118757E-4 0.0 0.0 13.868740048057019 0.0 24 8.755833574118757E-4 0.0 0.0 14.305280893395224 0.0 25 8.755833574118757E-4 0.0 0.0 14.697792404189292 0.0 26 8.755833574118757E-4 0.0 0.0 15.076919997948634 0.0 27 8.755833574118757E-4 0.0 0.0 15.465679008639507 0.0 28 0.0010006666941850008 0.0 0.0 15.878704186664365 0.0 29 0.0010006666941850008 0.0 0.0 16.287726697912483 0.0 30 0.0010006666941850008 0.0 0.0 16.76817179445806 0.0 31 0.0010006666941850008 0.0 0.0 17.212467806676198 0.0 32 0.0010006666941850008 0.0 0.0 17.628244818110065 0.0 33 0.0010006666941850008 0.0 0.0 18.0246339123441 0.0 34 0.0012508333677312509 0.0 0.0 18.41614475644398 0.0 35 0.001375916704504376 0.0 0.0 18.835424101307495 0.0 36 0.001375916704504376 0.0 0.0 19.2705890299412 0.0 37 0.001375916704504376 0.0 0.0 19.686616208048612 0.0 38 0.001375916704504376 0.0 0.0 20.111399219730146 0.0 39 0.001375916704504376 0.0 0.0 20.543687231618065 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 20 7.0319977E-4 45.0 1 ACCGGTC 20 7.0319977E-4 45.0 39 TCCGCGG 20 7.0319977E-4 45.0 2 CGTGATA 25 3.8897364E-5 45.0 22 CGCATCG 20 7.0319977E-4 45.0 21 CGCATAT 20 7.0319977E-4 45.0 25 CACGAAC 20 7.0319977E-4 45.0 42 ATCGTTC 20 7.0319977E-4 45.0 22 TACGAAG 40 6.8102963E-9 45.0 1 TTACCGG 20 7.0319977E-4 45.0 2 TCGACGT 20 7.0319977E-4 45.0 26 TCGACGG 25 3.8897364E-5 45.0 2 CGTCATA 20 7.0319977E-4 45.0 38 TACGTAG 25 3.8897364E-5 45.0 1 GTACGCG 20 7.0319977E-4 45.0 1 CGGACTC 40 6.8102963E-9 45.0 6 CGTTTTT 4575 0.0 43.327873 1 CGTTATT 625 0.0 41.76 1 CGGTCGA 60 3.6379788E-12 41.249996 41 GCGATAC 55 6.002665E-11 40.909092 9 >>END_MODULE