##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936020.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1095821 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.174234660587814 33.0 31.0 34.0 30.0 34.0 2 32.297356046288584 34.0 31.0 34.0 30.0 34.0 3 32.21913615453619 34.0 31.0 34.0 30.0 34.0 4 35.84044383161118 37.0 35.0 37.0 35.0 37.0 5 32.03858933165179 37.0 35.0 37.0 0.0 37.0 6 33.888297450039744 37.0 35.0 37.0 17.0 37.0 7 35.57063699272052 37.0 35.0 37.0 32.0 37.0 8 35.821330308508415 37.0 35.0 37.0 35.0 37.0 9 37.7992226832667 39.0 38.0 39.0 35.0 39.0 10 37.39863536106718 39.0 37.0 39.0 34.0 39.0 11 37.4094135812327 39.0 37.0 39.0 35.0 39.0 12 37.4014496893197 39.0 37.0 39.0 35.0 39.0 13 37.40316803565546 39.0 37.0 39.0 35.0 39.0 14 38.68170896524158 40.0 38.0 41.0 35.0 41.0 15 38.81739444672077 40.0 38.0 41.0 35.0 41.0 16 38.73001977512751 40.0 38.0 41.0 35.0 41.0 17 38.72561394607331 40.0 38.0 41.0 35.0 41.0 18 38.61298971273593 40.0 38.0 41.0 35.0 41.0 19 38.455959504335105 40.0 37.0 41.0 34.0 41.0 20 38.51462693268335 40.0 38.0 41.0 35.0 41.0 21 38.420945574140305 40.0 37.0 41.0 34.0 41.0 22 38.47806895469242 40.0 37.0 41.0 35.0 41.0 23 38.49205572807968 40.0 37.0 41.0 35.0 41.0 24 38.46274893436063 40.0 37.0 41.0 35.0 41.0 25 38.19358271104496 40.0 37.0 41.0 34.0 41.0 26 38.268547509127856 40.0 37.0 41.0 34.0 41.0 27 38.263834148095356 40.0 37.0 41.0 34.0 41.0 28 38.18280175320604 40.0 37.0 41.0 34.0 41.0 29 38.12449752286185 40.0 37.0 41.0 34.0 41.0 30 37.94825432255816 40.0 36.0 41.0 34.0 41.0 31 37.91818189284564 40.0 37.0 41.0 34.0 41.0 32 37.84160186745828 40.0 37.0 41.0 34.0 41.0 33 37.713396622258564 40.0 36.0 41.0 33.0 41.0 34 37.5935221172071 40.0 36.0 41.0 33.0 41.0 35 37.54666683701079 40.0 36.0 41.0 33.0 41.0 36 37.43650924740446 40.0 36.0 41.0 33.0 41.0 37 37.39949681562956 40.0 36.0 41.0 33.0 41.0 38 37.28290113075037 40.0 36.0 41.0 33.0 41.0 39 37.18952639162783 40.0 36.0 41.0 32.0 41.0 40 37.14183520848752 40.0 35.0 41.0 32.0 41.0 41 37.036469459884415 40.0 35.0 41.0 32.0 41.0 42 37.00840830756118 40.0 35.0 41.0 32.0 41.0 43 36.948301775563706 40.0 35.0 41.0 32.0 41.0 44 36.88145235398847 40.0 35.0 41.0 31.0 41.0 45 36.85991142714002 40.0 35.0 41.0 31.0 41.0 46 36.73037293499577 39.0 35.0 41.0 31.0 41.0 47 36.69702989813117 39.0 35.0 41.0 31.0 41.0 48 36.64064203916516 39.0 35.0 41.0 31.0 41.0 49 36.578573507899556 39.0 35.0 41.0 31.0 41.0 50 36.495830979694674 39.0 35.0 41.0 31.0 41.0 51 35.549880865579325 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 18.0 9 41.0 10 46.0 11 38.0 12 26.0 13 31.0 14 28.0 15 61.0 16 66.0 17 132.0 18 208.0 19 434.0 20 684.0 21 1163.0 22 1865.0 23 2812.0 24 4484.0 25 6888.0 26 9441.0 27 11005.0 28 11585.0 29 12144.0 30 14130.0 31 17121.0 32 22131.0 33 32805.0 34 56663.0 35 76723.0 36 78224.0 37 122849.0 38 210826.0 39 400787.0 40 361.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.16593859763593 21.11512737938039 24.249763419390575 13.469170603593106 2 34.433999713456856 23.951083251735454 24.65658168624255 16.95833534856514 3 32.841403842415865 23.41751070658438 27.75279904290938 15.98828640809037 4 29.463114870038083 24.652931455046033 27.33950161568358 18.544452059232302 5 22.162743732781177 37.80060794600578 23.03870796416568 16.997940357047366 6 24.721099522641016 35.2511039667975 25.91947042445801 14.108326086103478 7 78.51364410793369 6.800106951774058 10.63138961563978 4.054859324652475 8 80.30755022946265 6.094973540386614 9.759440638571446 3.8380355915792816 9 73.6483422018742 8.64639389097307 12.012180821502783 5.6930830856499375 10 37.62795201041046 26.885869133736257 20.766621555892797 14.719557299960487 11 28.2296104929546 27.25518127504401 26.050422468633105 18.464785763368287 12 26.43679944078458 23.507671417138383 30.23349616406329 19.822032978013745 13 23.79768228570177 24.431636188757107 31.510438292385345 20.26024323315578 14 20.221185759353034 26.903755266599198 31.068486550266876 21.80657242378089 15 20.116150356673216 26.76486396957167 33.09655500305251 20.022430670702608 16 22.522382761418154 25.67125470309476 31.779004052669187 20.027358482817906 17 22.285482756764107 26.183382139966287 29.515678199267946 22.015456904001656 18 22.367521702905858 26.51473187683025 30.78951763107296 20.328228789190934 19 23.086069713940507 27.22999467978803 29.152388939434452 20.531546666837013 20 23.999448815089323 26.655448289456036 29.798936140117778 19.546166755336866 21 23.558774653889643 27.707353664512723 29.728395422245057 19.005476259352577 22 22.54574424107587 25.595512405767 30.018315035028532 21.8404283181286 23 21.75784183730737 26.453042969609086 30.415825212329384 21.373289980754155 24 20.935170981392034 26.15436280195397 31.64850828739365 21.261957929260344 25 20.82566404549648 28.016163223738182 29.436194414963758 21.721978315801575 26 20.409537689093384 27.84131714942495 29.966938030937534 21.782207130544133 27 21.135021139401417 27.921713491528273 30.19398241136098 20.749282957709333 28 20.166706058744996 27.580051851534147 31.1397573143789 21.11348477534196 29 20.571699209998716 26.843070172957077 30.931146601497872 21.654084015546335 30 20.72938919768831 27.390969875554493 30.418015351047295 21.461625575709903 31 21.604714638613423 28.41896623627399 28.739730302668043 21.236588822444542 32 21.860687101269278 27.946717575224422 28.821404225690145 21.37119109781616 33 21.242885471258536 27.99453560389881 28.4626777548523 22.299901169990356 34 20.5645812591655 28.377536112193507 28.940219251136817 22.117663377504172 35 21.43662149201375 26.710658036303375 29.069437435493573 22.783283036189307 36 20.7595948608395 29.432909206886894 27.99243672096081 21.815059211312796 37 20.52223857728589 29.464574962516686 28.71144101089503 21.301745449302395 38 21.01620611395474 28.526465545011458 28.107601515210966 22.34972682582283 39 21.532348805142444 27.839583289606608 28.275420894470905 22.352647010780043 40 22.0037761641728 26.989535699717383 29.491312906031187 21.515375230078636 41 19.614243567151934 27.364596955159648 28.862469326650974 24.15869015103744 42 19.67885265933031 27.67888186117988 28.873785043360183 23.768480436129625 43 20.901497598604152 26.79278823822504 28.955002687482718 23.35071147568809 44 20.7082178567485 27.52383829110776 28.40947563516304 23.358468216980693 45 20.675639543319573 27.73409160802722 27.68134576723753 23.90892308141567 46 20.389552673292442 28.42635795444694 28.703684269602427 22.480405102658192 47 20.60728896416477 26.706642781987206 29.978801282326216 22.707266971521808 48 19.79383494202064 26.823450180275792 30.098802632911763 23.283912244791804 49 20.287893734469407 26.731646865683356 29.847575470811382 23.132883929035856 50 19.726488176444875 26.56711269450029 30.116049975315313 23.590349153739528 51 19.914201315725837 25.695163717431953 29.042790747758986 25.34784421908323 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 535.0 1 1295.0 2 2055.0 3 9511.5 4 16968.0 5 10722.5 6 4477.0 7 4325.5 8 4174.0 9 4103.0 10 4032.0 11 4005.5 12 3979.0 13 3835.0 14 3691.0 15 3630.0 16 3569.0 17 3633.0 18 3697.0 19 3854.0 20 4011.0 21 5333.0 22 6655.0 23 6460.0 24 6265.0 25 7531.5 26 10662.5 27 12527.0 28 15425.0 29 18323.0 30 21619.0 31 24915.0 32 27868.5 33 30822.0 34 33647.0 35 36472.0 36 38035.5 37 39599.0 38 42855.5 39 46112.0 40 50696.5 41 55281.0 42 58291.0 43 61301.0 44 67799.0 45 74297.0 46 80351.5 47 86406.0 48 89823.5 49 93241.0 50 90243.5 51 87246.0 52 80281.0 53 73316.0 54 65916.5 55 58517.0 56 53757.5 57 48998.0 58 47076.5 59 45155.0 60 42425.0 61 39695.0 62 34841.0 63 29987.0 64 25787.5 65 21588.0 66 17770.5 67 13953.0 68 12022.0 69 10091.0 70 7984.5 71 5878.0 72 4857.0 73 3836.0 74 3198.0 75 1934.5 76 1309.0 77 1010.5 78 712.0 79 571.5 80 431.0 81 334.0 82 237.0 83 154.0 84 71.0 85 44.5 86 18.0 87 15.0 88 12.0 89 8.5 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1095821.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.625876693327317 #Duplication Level Percentage of deduplicated Percentage of total 1 72.22434344938156 20.67485149838519 2 9.930243258665461 5.685238381146047 3 3.9622580836259766 3.402693339870498 4 2.1377370589064064 2.447783898040439 5 1.406185520854051 2.0126646663955157 6 0.9601995200054667 1.6491931836401137 7 0.739844807445914 1.4825094361101656 8 0.5909391419437234 1.353292080843334 9 0.4932962123518166 1.2708932893261657 >10 7.138595715646781 48.9774994062477 >50 0.363910526085899 6.299168815591403 >100 0.04762032118337573 2.631569487809225 >500 0.002574071415296549 0.5382692970735825 >1k 0.0019305535614724117 0.6488889797883965 >5k 0.0 0.0 >10k+ 3.2175892691206864E-4 0.9254842397322651 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10048 0.9169380765654245 No Hit GCTGTCTCTTATACACATCTGACGCTCAGAACCTCGTATGCCGTCTTCTGC 1441 0.1314995788545757 RNA PCR Primer, Index 40 (96% over 27bp) AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1229 0.11215335351302813 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1208 0.11023698213485597 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.125577991296024E-5 0.0 0.0 0.08797057183609366 0.0 2 9.125577991296024E-5 0.0 0.0 0.362559213594191 0.0 3 1.8251155982592049E-4 0.0 0.0 0.5294660350549953 0.0 4 1.8251155982592049E-4 0.0 0.0 0.7336052147202874 0.0 5 1.8251155982592049E-4 0.0 0.0 1.363270096119713 0.0 6 1.8251155982592049E-4 0.0 0.0 1.9223030038665074 0.0 7 1.8251155982592049E-4 0.0 0.0 2.394186641796425 0.0 8 1.8251155982592049E-4 0.0 0.0 3.1016014476816927 0.0 9 1.8251155982592049E-4 0.0 0.0 3.387232038809258 0.0 10 1.8251155982592049E-4 0.0 0.0 4.038707051607881 0.0 11 1.8251155982592049E-4 0.0 0.0 4.970428564519206 0.0 12 1.8251155982592049E-4 0.0 0.0 5.718360936685827 0.0 13 1.8251155982592049E-4 0.0 0.0 6.034653469864147 0.0 14 1.8251155982592049E-4 0.0 0.0 6.1812102524043615 0.0 15 1.8251155982592049E-4 0.0 0.0 6.40095417043477 0.0 16 1.8251155982592049E-4 0.0 0.0 6.859879487617047 0.0 17 1.8251155982592049E-4 0.0 0.0 7.398379844883426 0.0 18 1.8251155982592049E-4 0.0 0.0 7.979496651369156 0.0 19 1.8251155982592049E-4 0.0 0.0 8.359029440027157 0.0 20 1.8251155982592049E-4 0.0 0.0 8.737832182445855 0.0 21 2.737673397388807E-4 0.0 0.0 9.207708193217687 0.0 22 2.737673397388807E-4 0.0 0.0 9.709067448059491 0.0 23 3.6502311965184097E-4 0.0 0.0 10.17912597039115 0.0 24 3.6502311965184097E-4 0.0 0.0 10.58822563174095 0.0 25 3.6502311965184097E-4 0.0 0.0 10.968488466638256 0.0 26 3.6502311965184097E-4 0.0 0.0 11.314347872508375 0.0 27 3.6502311965184097E-4 0.0 0.0 11.647979003870157 0.0 28 3.6502311965184097E-4 0.0 0.0 11.990370690103584 0.0 29 3.6502311965184097E-4 0.0 0.0 12.372732407938887 0.0 30 3.6502311965184097E-4 0.0 0.0 12.809756337942055 0.0 31 4.562788995648012E-4 0.0 0.0 13.216209581674379 0.0 32 4.562788995648012E-4 0.0 0.0 13.585065444082565 0.0 33 4.562788995648012E-4 0.0 0.0 13.9592141417257 0.0 34 4.562788995648012E-4 0.0 0.0 14.334275397167968 0.0 35 6.387904593907216E-4 0.0 0.0 14.721747438678397 0.0 36 6.387904593907216E-4 0.0 0.0 15.093249718704058 0.0 37 6.387904593907216E-4 0.0 0.0 15.465573300748936 0.0 38 6.387904593907216E-4 0.0 0.0 15.84455855472746 0.0 39 6.387904593907216E-4 0.0 0.0 16.2637876076476 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATCG 20 7.033143E-4 45.0 22 GTCTCGA 25 3.8906863E-5 45.0 45 GTACGCG 20 7.033143E-4 45.0 1 CGTTTTT 3920 0.0 41.785713 1 CGTTATT 590 0.0 41.18644 1 TACGGGT 200 0.0 40.5 4 TCGTAAG 85 0.0 39.705883 1 TCGTGCG 40 3.4580262E-7 39.375 1 CTTGCGG 75 0.0 39.0 2 GTTACGG 135 0.0 38.333332 2 CGGGCAC 230 0.0 38.152172 6 CGTAAGG 225 0.0 38.0 2 TATACGG 125 0.0 37.800003 2 TATGGGC 395 0.0 37.594936 4 ACGGGTC 240 0.0 37.500004 5 ACTAACG 30 1.1398871E-4 37.500004 1 TGCACGG 115 0.0 37.173912 2 CGTATGG 110 0.0 36.81818 2 GTATACG 55 2.748493E-9 36.81818 1 TACGGGC 245 0.0 36.734695 4 >>END_MODULE