##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936019.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 608940 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02284625743095 33.0 31.0 34.0 30.0 34.0 2 32.14359707031891 33.0 31.0 34.0 30.0 34.0 3 32.04334417183959 33.0 31.0 34.0 30.0 34.0 4 35.73527769566788 37.0 35.0 37.0 33.0 37.0 5 31.926639734620817 37.0 35.0 37.0 0.0 37.0 6 33.78769172660689 37.0 35.0 37.0 17.0 37.0 7 35.46743521529215 37.0 35.0 37.0 32.0 37.0 8 35.68624659243932 37.0 35.0 37.0 33.0 37.0 9 37.630398725654416 39.0 37.0 39.0 35.0 39.0 10 37.35820934739055 39.0 37.0 39.0 34.0 39.0 11 37.35365060597103 39.0 37.0 39.0 34.0 39.0 12 37.26479291884258 39.0 37.0 39.0 34.0 39.0 13 37.17378231024403 39.0 37.0 39.0 34.0 39.0 14 38.3709117482839 40.0 38.0 41.0 34.0 41.0 15 38.49719184156074 40.0 38.0 41.0 34.0 41.0 16 38.48541399809505 40.0 38.0 41.0 34.0 41.0 17 38.46782277400072 40.0 38.0 41.0 34.0 41.0 18 38.33213945544717 40.0 38.0 41.0 34.0 41.0 19 38.11695240910434 40.0 37.0 41.0 34.0 41.0 20 38.03850461457615 40.0 36.0 41.0 34.0 41.0 21 38.00185896804283 40.0 36.0 41.0 34.0 41.0 22 38.04932341445791 40.0 36.0 41.0 34.0 41.0 23 38.0500738989063 40.0 36.0 41.0 34.0 41.0 24 38.01724143593786 40.0 35.0 41.0 34.0 41.0 25 37.78047590895655 40.0 35.0 41.0 34.0 41.0 26 37.79194009261996 40.0 35.0 41.0 34.0 41.0 27 37.775766085328605 40.0 35.0 41.0 34.0 41.0 28 37.69256905442244 40.0 35.0 41.0 33.0 41.0 29 37.64853023286366 40.0 35.0 41.0 33.0 41.0 30 37.47906526094525 40.0 35.0 41.0 33.0 41.0 31 37.406209150326795 40.0 35.0 41.0 33.0 41.0 32 37.19977173448944 40.0 35.0 41.0 33.0 41.0 33 36.97462968436956 40.0 35.0 41.0 32.0 41.0 34 36.7668276020626 40.0 35.0 41.0 31.0 41.0 35 36.69742339146714 40.0 35.0 41.0 31.0 41.0 36 36.5720530758367 40.0 35.0 41.0 31.0 41.0 37 36.467407297927544 40.0 35.0 41.0 30.0 41.0 38 36.36390613196703 40.0 35.0 41.0 30.0 41.0 39 36.2437629323086 39.0 35.0 41.0 30.0 41.0 40 36.1629848589352 39.0 35.0 41.0 29.0 41.0 41 36.04980622064571 39.0 35.0 41.0 29.0 41.0 42 36.032725720103784 39.0 35.0 41.0 29.0 41.0 43 35.95667060794167 39.0 35.0 41.0 29.0 41.0 44 35.90479521791966 39.0 35.0 41.0 28.0 41.0 45 35.91172200873649 39.0 35.0 41.0 28.0 41.0 46 35.793271915131214 39.0 35.0 41.0 28.0 41.0 47 35.68496896245936 39.0 35.0 41.0 27.0 41.0 48 35.656595066837454 39.0 35.0 41.0 27.0 41.0 49 35.62005944756462 39.0 35.0 41.0 27.0 41.0 50 35.53189312575952 38.0 35.0 41.0 27.0 41.0 51 34.525055013630244 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 7.0 9 21.0 10 26.0 11 18.0 12 20.0 13 18.0 14 13.0 15 24.0 16 42.0 17 79.0 18 158.0 19 292.0 20 637.0 21 1094.0 22 1801.0 23 2615.0 24 3861.0 25 5716.0 26 7817.0 27 8938.0 28 8989.0 29 8933.0 30 9734.0 31 11742.0 32 14752.0 33 21314.0 34 35528.0 35 49678.0 36 45738.0 37 66563.0 38 109598.0 39 193036.0 40 135.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.596150688080925 19.538542385128256 22.532761848457977 15.33254507833284 2 35.76280093276842 25.363089959601933 22.83591158406411 16.03819752356554 3 30.538312477419776 25.097710776102737 29.42654448714159 14.937432259335894 4 27.930666403915 23.762111209642985 30.75081288796926 17.556409498472757 5 22.872532597628666 35.72092488586725 24.621144940388216 16.785397576115873 6 23.167799783229874 34.90343876243965 28.157289716556637 13.771471737773835 7 71.39800308733209 7.063585903373075 16.930732091831707 4.607678917463132 8 71.20915032679738 8.580155680362598 14.99556606562223 5.215127927217789 9 64.39829868295726 8.930436496206523 17.425033665057313 9.246231155778894 10 37.382172299405525 24.19548724012218 24.5206424278254 13.901698032646895 11 29.374486813150718 24.272342102670212 28.683778368969026 17.669392715210037 12 26.46270568528919 20.91158406411141 32.953657174762704 19.672053075836697 13 23.877886162840344 23.069103688376526 34.845469175945084 18.207540972838046 14 19.256084343285053 26.66108319374651 33.51857325844911 20.564259204519328 15 18.57276578973298 24.454133412158832 37.81160705488226 19.161493743225932 16 20.661641541038524 24.07265083587874 34.197293657831636 21.068413965251093 17 20.683318553552073 24.36529050481164 32.83344828718757 22.117942654448715 18 21.27894373829934 24.505698426774394 33.298190297894706 20.917167537031563 19 22.457384964035864 25.409071501297337 31.899201891812 20.234341642854798 20 23.355338785430423 25.95575918809735 32.922619634118305 17.766282392353926 21 22.683844056885736 26.650408907281502 32.68039544125858 17.98535159457418 22 20.2364765001478 23.804972575294777 33.48737149801294 22.471179426544488 23 20.479686011758137 25.9212730318258 32.91013892994384 20.68890202647223 24 21.493579006141818 24.298453049561534 32.29464315039249 21.913324793904163 25 19.542976319506028 27.20350116596052 31.17581370906822 22.077708805465235 26 18.95901073997438 26.15512201530528 32.68335139751043 22.202515847209906 27 21.69868952606168 25.4253292606825 31.90675600223339 20.969225211022433 28 17.943639767464774 26.135744079876506 34.19499458074687 21.725621571911844 29 20.050908135448484 25.796794429664665 32.865635366374356 21.286662068512495 30 21.43626629881433 27.084113377344238 31.16497520281144 20.314645121029987 31 22.833612506979343 26.402108582126317 28.875258646172036 21.889020264722305 32 23.0884816238053 27.433080434854006 29.802936249876833 19.675501691463857 33 22.006765855420895 27.049955660656224 28.902847571189277 22.0404309127336 34 21.015370972509608 26.738594935461624 30.298387361644824 21.947646730383948 35 22.861201431996584 26.18238250073899 29.28892830163891 21.667487765625513 36 22.5588727953493 29.42391697047328 27.405984169212072 20.61122606496535 37 22.651821197490722 26.40194436233455 30.737675304627714 20.208559135547016 38 20.673793805629455 28.351397510427955 28.25910598745361 22.715702696488982 39 22.124347226327718 26.589483364535095 30.09869609485335 21.187473314283835 40 22.891417873682133 26.259237363287024 30.39199264295333 20.457352120077513 41 21.631195191644498 27.225178178474067 28.385062567740665 22.758564062140767 42 22.35491181397182 25.95001149538542 29.153282753637466 22.541793937005288 43 22.040266692941834 25.87611258908924 29.891450717640488 22.19217000032844 44 20.90107399743817 25.750977107761024 29.970933096856832 23.37701579794397 45 21.416559923802016 24.948599205176208 29.01386015042533 24.620980720596446 46 23.184550201990344 26.553847669721154 28.784280881531842 21.47732124675666 47 20.880710743258778 25.794002693204586 32.15554898676388 21.16973757677275 48 21.250862153906787 25.116596052156204 30.466219988833053 23.16632180510395 49 20.90156665681348 24.329490590205932 32.89601602785168 21.872926725128913 50 20.741616579630175 23.93372089204191 31.67996846979998 23.644694058527936 51 20.00722567083785 24.150491017177387 29.101060859854826 26.741222452129932 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 524.0 1 1004.5 2 1485.0 3 8784.5 4 16084.0 5 10245.0 6 4406.0 7 4157.5 8 3909.0 9 3840.5 10 3772.0 11 3707.5 12 3643.0 13 3494.0 14 3345.0 15 3207.0 16 3069.0 17 2912.0 18 2755.0 19 2667.5 20 2580.0 21 2829.5 22 3079.0 23 3281.0 24 3483.0 25 4316.5 26 5636.0 27 6122.0 28 6898.5 29 7675.0 30 9361.0 31 11047.0 32 12028.5 33 13010.0 34 14543.5 35 16077.0 36 16532.5 37 16988.0 38 18760.0 39 20532.0 40 23299.5 41 26067.0 42 29021.0 43 31975.0 44 36467.5 45 40960.0 46 49754.0 47 58548.0 48 59140.5 49 59733.0 50 56963.0 51 54193.0 52 47103.0 53 40013.0 54 35480.0 55 30947.0 56 29145.5 57 27344.0 58 25233.0 59 23122.0 60 21375.0 61 19628.0 62 18005.5 63 16383.0 64 13914.0 65 11445.0 66 9401.5 67 7358.0 68 6010.0 69 4662.0 70 3865.5 71 3069.0 72 2450.0 73 1831.0 74 1587.0 75 1062.0 76 781.0 77 599.0 78 417.0 79 328.5 80 240.0 81 163.5 82 87.0 83 57.0 84 27.0 85 24.5 86 22.0 87 13.0 88 4.0 89 4.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 608940.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.0576289496096 #Duplication Level Percentage of deduplicated Percentage of total 1 73.52759586503552 25.041755775282294 2 10.695768223235733 7.285450109559756 3 4.040725847362286 4.128526247896848 4 2.091379391014999 2.8490969316819736 5 1.2994954479019392 2.2128866893175494 6 0.9062649274225048 1.8519140776920326 7 0.6668298057613524 1.5897449468012268 8 0.5199066713844009 1.4165430801949235 9 0.44523179125107715 1.3647185228699303 >10 5.597193255276062 40.63330641420628 >50 0.15684013185962814 3.4118033215654107 >100 0.04446246728708844 2.8480229160783876 >500 0.0034201897913144954 0.7631336893447552 >1k 0.004397386874547209 2.992296119013822 >5k 4.885985416163565E-4 1.6108011584948168 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9680 1.5896475843268632 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCG 3256 0.534699642000854 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGC 3072 0.504483200315302 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTC 2886 0.4739383190462115 No Hit GCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 2336 0.3836174335730942 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 1645 0.27014155746050517 No Hit CCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 1353 0.22218937826386834 No Hit CTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGCT 1196 0.19640687095608764 Illumina Single End Adapter 1 (95% over 21bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1173 0.19262981574539362 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCC 1065 0.1748940782343088 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 707 0.11610339278089796 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCT 706 0.11593917298912866 No Hit TCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 689 0.11314743652905049 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 685 0.11249055736197328 No Hit GAACTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCT 641 0.10526488652412389 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.284395835386081E-4 0.0 0.0 0.2029756626268598 0.0 2 3.284395835386081E-4 0.0 0.0 1.036555325647847 0.0 3 3.284395835386081E-4 0.0 0.0 1.3694288435642263 0.0 4 3.284395835386081E-4 0.0 0.0 1.849443294905902 0.0 5 3.284395835386081E-4 0.0 0.0 3.3890038427431275 0.0 6 3.284395835386081E-4 0.0 0.0 4.1568955890563934 0.0 7 3.284395835386081E-4 0.0 0.0 5.0141229020921605 0.0 8 3.284395835386081E-4 0.0 0.0 6.193056787203994 0.0 9 3.284395835386081E-4 0.0 0.0 6.5914540020363255 0.0 10 3.284395835386081E-4 0.0 0.0 8.096692613393767 0.0 11 3.284395835386081E-4 0.0 0.0 9.57549183827635 0.0 12 3.284395835386081E-4 0.0 0.0 11.28124281538411 0.0 13 3.284395835386081E-4 0.0 0.0 11.825467205307584 0.0 14 3.284395835386081E-4 0.0 0.0 12.061451046080073 0.0 15 3.284395835386081E-4 0.0 0.0 12.551154465136138 0.0 16 3.284395835386081E-4 0.0 0.0 13.351069070844417 0.0 17 3.284395835386081E-4 0.0 0.0 14.230301835977272 0.0 18 3.284395835386081E-4 0.0 0.0 15.17686471573554 0.0 19 3.284395835386081E-4 0.0 0.0 15.864781423457154 0.0 20 3.284395835386081E-4 0.0 0.0 16.445791046736954 0.0 21 4.926593753079121E-4 0.0 0.0 17.153085689887345 0.0 22 4.926593753079121E-4 0.0 0.0 17.881893125759518 0.0 23 4.926593753079121E-4 0.0 0.0 18.552402535553586 0.0 24 4.926593753079121E-4 0.0 0.0 19.126186487995533 0.0 25 4.926593753079121E-4 0.0 0.0 19.663842086248234 0.0 26 6.568791670772162E-4 0.0 0.0 20.134988668834367 0.0 27 6.568791670772162E-4 0.0 0.0 20.63470949518836 0.0 28 6.568791670772162E-4 0.0 0.0 21.133773442375276 0.0 29 6.568791670772162E-4 0.0 0.0 21.614280553092257 0.0 30 6.568791670772162E-4 0.0 0.0 22.183794790948205 0.0 31 6.568791670772162E-4 0.0 0.0 22.701908233980358 0.0 32 6.568791670772162E-4 0.0 0.0 23.193253850954118 0.0 33 9.853187506158243E-4 0.0 0.0 23.701842546063652 0.0 34 9.853187506158243E-4 0.0 0.0 24.203041350543568 0.0 35 0.0011495385423851282 0.0 0.0 24.71491444148849 0.0 36 0.0011495385423851282 0.0 0.0 25.206916937629323 0.0 37 0.0011495385423851282 0.0 0.0 25.69382862022531 0.0 38 0.0011495385423851282 0.0 0.0 26.194698985121686 0.0 39 0.0011495385423851282 0.0 0.0 26.728905967747234 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 100 0.0 45.000004 4 CCGATCG 25 3.8886366E-5 45.000004 40 ACGGGTA 25 3.8886366E-5 45.000004 5 ACGTCGC 25 3.8886366E-5 45.000004 20 ACAACGA 40 6.8066583E-9 45.0 13 AATCACG 20 7.030671E-4 45.0 35 CGACGGT 20 7.030671E-4 45.0 28 CGCCTAA 20 7.030671E-4 45.0 30 GCCGATT 20 7.030671E-4 45.0 9 CGATCGA 45 3.8380676E-10 45.0 41 GATTACG 20 7.030671E-4 45.0 1 CGTATGG 65 0.0 44.999996 2 ACGATCG 30 2.1638134E-6 44.999996 40 CGTTATT 390 0.0 44.423077 1 CGTTTTT 3575 0.0 43.174824 1 ACTATGC 280 0.0 41.785717 8 AATGCGG 70 0.0 41.785717 2 CGTGTAC 275 0.0 41.727272 18 GCGTTAG 60 3.6379788E-12 41.249996 1 ACGGGCG 60 3.6379788E-12 41.249996 5 >>END_MODULE