##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936018.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 736418 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.15501386440853 33.0 31.0 34.0 30.0 34.0 2 32.28063409639634 34.0 31.0 34.0 30.0 34.0 3 32.19455119239345 33.0 31.0 34.0 30.0 34.0 4 35.832003020023954 37.0 35.0 37.0 35.0 37.0 5 32.02005247020035 37.0 35.0 37.0 0.0 37.0 6 33.86403238378204 37.0 35.0 37.0 17.0 37.0 7 35.55377652365912 37.0 35.0 37.0 32.0 37.0 8 35.82279493439867 37.0 35.0 37.0 35.0 37.0 9 37.804248402401896 39.0 38.0 39.0 35.0 39.0 10 37.45626532757211 39.0 37.0 39.0 34.0 39.0 11 37.38467962488695 39.0 37.0 39.0 35.0 39.0 12 37.268336732670846 39.0 37.0 39.0 34.0 39.0 13 37.177408754267276 39.0 37.0 39.0 34.0 39.0 14 38.29853154051096 40.0 38.0 41.0 33.0 41.0 15 38.45666048358405 40.0 38.0 41.0 34.0 41.0 16 38.471924912210184 40.0 38.0 41.0 34.0 41.0 17 38.45757436673194 40.0 38.0 41.0 34.0 41.0 18 38.35480257136572 40.0 37.0 41.0 34.0 41.0 19 38.19685966394086 40.0 37.0 41.0 34.0 41.0 20 38.194298618447675 40.0 36.0 41.0 34.0 41.0 21 38.113969240295596 40.0 36.0 41.0 34.0 41.0 22 38.18379235705808 40.0 36.0 41.0 34.0 41.0 23 38.20168165362607 40.0 36.0 41.0 34.0 41.0 24 38.167768848670185 40.0 36.0 41.0 34.0 41.0 25 37.94125618874063 40.0 36.0 41.0 34.0 41.0 26 37.95762596786064 40.0 36.0 41.0 34.0 41.0 27 37.940532415014296 40.0 36.0 41.0 34.0 41.0 28 37.89951902316348 40.0 36.0 41.0 34.0 41.0 29 37.87011860112056 40.0 36.0 41.0 34.0 41.0 30 37.695065845756076 40.0 35.0 41.0 33.0 41.0 31 37.60186605976497 40.0 35.0 41.0 33.0 41.0 32 37.459269056432625 40.0 35.0 41.0 33.0 41.0 33 37.297623089060835 40.0 35.0 41.0 33.0 41.0 34 37.09636918163326 40.0 35.0 41.0 32.0 41.0 35 37.01902587932397 40.0 35.0 41.0 32.0 41.0 36 36.90254855258834 40.0 35.0 41.0 32.0 41.0 37 36.8236042573647 40.0 35.0 41.0 31.0 41.0 38 36.7160661472153 40.0 35.0 41.0 31.0 41.0 39 36.64117525644403 40.0 35.0 41.0 31.0 41.0 40 36.5728988156183 40.0 35.0 41.0 31.0 41.0 41 36.41142666257479 39.0 35.0 41.0 30.0 41.0 42 36.41991097447374 39.0 35.0 41.0 30.0 41.0 43 36.355139336626756 39.0 35.0 41.0 30.0 41.0 44 36.319663560640834 39.0 35.0 41.0 30.0 41.0 45 36.320228457207726 39.0 35.0 41.0 30.0 41.0 46 36.22252036207697 39.0 35.0 41.0 30.0 41.0 47 36.113522483154945 39.0 35.0 41.0 30.0 41.0 48 36.08557096648914 39.0 35.0 41.0 30.0 41.0 49 36.05154545380477 39.0 35.0 41.0 30.0 41.0 50 35.951857504841 39.0 35.0 41.0 30.0 41.0 51 34.989865809906874 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 12.0 9 29.0 10 41.0 11 14.0 12 23.0 13 19.0 14 19.0 15 40.0 16 66.0 17 93.0 18 205.0 19 357.0 20 708.0 21 1273.0 22 1887.0 23 2882.0 24 4054.0 25 5887.0 26 7747.0 27 8674.0 28 8667.0 29 9043.0 30 10262.0 31 12605.0 32 17399.0 33 25867.0 34 45954.0 35 56600.0 36 52910.0 37 81705.0 38 135120.0 39 246020.0 40 232.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.95753227107431 19.50509085872426 23.651784720091033 13.885592150110398 2 34.61444451384948 24.31513080886127 24.79013277785171 16.28029189943755 3 30.780344858490693 24.622429109554627 28.653835185994907 15.943390845959767 4 27.27622084196747 24.46205823323167 30.198066858767707 18.06365406603315 5 23.070049890143913 36.191402165617895 24.024127601443745 16.714420342794444 6 24.23745753091315 34.087705623708274 27.381595778484503 14.293241066894074 7 77.20370767689003 5.816261959919503 12.52644557846223 4.453584784728239 8 78.98557612660201 6.263698062784995 10.717418639957197 4.033307170655796 9 73.11418243443262 7.407342025860313 12.378296022096148 7.100179517610922 10 40.889005972151686 26.109627955862024 19.74340659788327 13.257959474103023 11 30.956875035645513 24.669956464942462 26.463910442167354 17.909258057244664 12 27.59709838705735 22.48600658864938 30.467071690262866 19.4498233340304 13 25.53305323878558 23.114589811764514 32.452221428590825 18.900135520859077 14 20.608404465941895 26.412037728572628 32.882411891072735 20.09714591441274 15 19.24070297032392 25.196831147527625 36.153380281307626 19.40908560084083 16 23.90734609963363 24.545299001382368 31.499094264398753 20.04826063458525 17 24.170104478706385 25.14984696191565 30.02126509672496 20.658783462653005 18 24.36917620155944 24.18286896843912 31.575816995239116 19.87213783476232 19 24.16562332805553 26.32730324353832 29.412643362872714 20.094430065533434 20 24.684893633778643 27.035053461485187 29.92213661263033 18.35791629210584 21 24.011498904154976 26.811674891162358 31.10271612046419 18.07411008421847 22 22.963045444299297 23.73339597891415 32.27324698744463 21.030311589341924 23 22.024991241387365 26.01973335795703 31.341031859623204 20.614243541032405 24 22.088677897607063 25.585740707044096 31.669377989131174 20.656203406217664 25 22.528509623610503 26.7822079308219 29.465330831131233 21.223951614436366 26 20.95128038695415 26.604591414115355 30.283072928689958 22.161055270240542 27 21.17031359907009 26.80732953295547 31.13476313723999 20.887593730734448 28 19.756985842279793 26.499623854930217 31.740397437324997 22.002992865464993 29 21.419085356414428 25.762678261530812 31.535079262049543 21.283157120005214 30 22.530818095157912 26.515918948206046 30.752778992365748 20.20048396427029 31 23.938578361745638 25.978724039879523 29.019795822481253 21.062901775893582 32 25.6107265167337 26.166117612551567 28.684931655662954 19.538224215051777 33 24.892112903269613 26.118318672275798 27.552694257880717 21.436874166573876 34 21.89164306141349 26.601739772792083 30.510253687443818 20.99636347835061 35 22.76207262723073 27.644489950001223 28.8558943426152 20.737543080152847 36 23.914678891607753 29.041251028627762 27.21389211018742 19.83017796957706 37 23.20611391899709 28.99277312613217 27.843833257742208 19.957279697128534 38 23.379520869940713 27.638107705134857 26.87210252872689 22.110268896197542 39 22.568704187024217 27.24281590075202 27.605381726139232 22.583098186084534 40 23.4702302225095 25.638292382858648 29.06447153654582 21.827005858086032 41 21.519707557392675 27.54400354146694 28.162266538840715 22.77402236229967 42 22.2417159819559 26.577976095098165 29.198227093851592 21.982080829094347 43 22.17857249551206 26.369534693611506 28.85426483328762 22.597627977588814 44 22.044137975986462 25.791602052095413 29.019660030037286 23.144599941880834 45 22.049841258633005 25.042435138739137 28.33662403689209 24.571099565735764 46 22.961415934971715 25.99746339714673 28.193634593396684 22.84748607448487 47 20.901037182687006 26.75206200826161 30.603135719116047 21.743765089935334 48 21.446108052763513 27.529066372630762 29.03459719887347 21.99022837573226 49 22.751616609045406 25.411790586324614 30.13288648566439 21.703706318965587 50 21.4281834501601 25.984155737638137 29.66290883710067 22.9247519751011 51 20.589257731342798 25.936628382250298 28.47200910352544 25.002104782881464 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 468.0 1 922.5 2 1377.0 3 6456.5 4 11536.0 5 7494.0 6 3452.0 7 3323.5 8 3195.0 9 3169.0 10 3143.0 11 3112.5 12 3082.0 13 3028.0 14 2974.0 15 2915.0 16 2856.0 17 2800.0 18 2744.0 19 2823.0 20 2902.0 21 3056.0 22 3210.0 23 3489.0 24 3768.0 25 4389.0 26 6368.5 27 7727.0 28 8883.5 29 10040.0 30 10977.5 31 11915.0 32 14529.5 33 17144.0 34 20179.0 35 23214.0 36 24281.0 37 25348.0 38 26981.0 39 28614.0 40 31507.5 41 34401.0 42 37066.0 43 39731.0 44 43473.0 45 47215.0 46 55346.0 47 63477.0 48 62935.0 49 62393.0 50 61753.0 51 61113.0 52 56396.0 53 51679.0 54 46197.0 55 40715.0 56 38006.0 57 35297.0 58 33637.0 59 31977.0 60 29275.5 61 26574.0 62 24108.0 63 21642.0 64 18477.0 65 15312.0 66 13124.5 67 10937.0 68 9430.5 69 7924.0 70 6426.0 71 4928.0 72 3959.0 73 2990.0 74 2527.0 75 1680.5 76 1297.0 77 964.5 78 632.0 79 393.0 80 154.0 81 118.5 82 83.0 83 94.0 84 105.0 85 65.5 86 26.0 87 20.5 88 15.0 89 12.0 90 9.0 91 6.0 92 3.0 93 2.0 94 1.0 95 1.5 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 736418.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.64104131303105 #Duplication Level Percentage of deduplicated Percentage of total 1 73.48287159540313 23.25074575950306 2 9.529689010544638 6.030585673659617 3 3.73588717275615 3.546220811220003 4 2.1035502027436075 2.662340754761813 5 1.396480040964616 2.209304133449235 6 0.9916856281187807 1.882677955730729 7 0.722230010095012 1.5996476710848972 8 0.604147508583766 1.5292685022610975 9 0.5271446786856424 1.5011465900613201 >10 6.65364941363075 47.43269882703626 >50 0.22004880840524035 4.108055928038481 >100 0.02739738125767045 1.5427741760613367 >500 0.003044153473074494 0.6525004586945111 >1k 0.0017395162703282825 1.164373446114077 >5k 4.3487906758207063E-4 0.8876593123235537 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6451 0.8759970560198149 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTC 2418 0.32834612950796965 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCG 2327 0.3159890171071321 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGC 2248 0.30526141403387747 No Hit GCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 1469 0.1994791001849493 Illumina Single End Adapter 1 (95% over 21bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 795 0.10795499295237217 No Hit CCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 759 0.10306646496962323 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10265908763772749 0.0 2 0.0 0.0 0.0 0.5024320426714176 0.0 3 0.0 0.0 0.0 0.6852086722486413 0.0 4 0.0 0.0 0.0 0.948917598429153 0.0 5 0.0 0.0 0.0 1.8314326917592998 0.0 6 0.0 0.0 0.0 2.347851356159138 0.0 7 0.0 0.0 0.0 2.8938727733434 0.0 8 0.0 0.0 0.0 3.6530883275531014 0.0 9 0.0 0.0 0.0 3.970842646431782 0.0 10 0.0 0.0 0.0 4.954251525628108 0.0 11 0.0 0.0 0.0 5.922044273768431 0.0 12 0.0 0.0 0.0 7.020333560559356 0.0 13 0.0 0.0 0.0 7.360629425136268 0.0 14 0.0 0.0 0.0 7.538789111618673 0.0 15 0.0 0.0 0.0 7.837125111010323 0.0 16 0.0 0.0 0.0 8.291350836074077 0.0 17 0.0 0.0 0.0 8.816867594219588 0.0 18 0.0 0.0 0.0 9.347272880347846 0.0 19 0.0 0.0 0.0 9.785882474355597 0.0 20 0.0 0.0 0.0 10.157682185932446 0.0 21 0.0 0.0 0.0 10.609463647004826 0.0 22 0.0 0.0 0.0 11.130906631831378 0.0 23 0.0 0.0 0.0 11.5977610541839 0.0 24 0.0 0.0 0.0 11.983683179933136 0.0 25 0.0 0.0 0.0 12.333756100475545 0.0 26 0.0 0.0 0.0 12.671200323729186 0.0 27 0.0 0.0 0.0 13.049110695284472 0.0 28 0.0 0.0 0.0 13.393072955848444 0.0 29 0.0 0.0 0.0 13.778859289153715 0.0 30 1.35792443965248E-4 0.0 0.0 14.227381731570928 0.0 31 1.35792443965248E-4 0.0 0.0 14.602033084471048 0.0 32 1.35792443965248E-4 0.0 0.0 14.95373551434104 0.0 33 1.35792443965248E-4 0.0 0.0 15.311820189077398 0.0 34 1.35792443965248E-4 0.0 0.0 15.681175636662873 0.0 35 2.71584887930496E-4 0.0 0.0 16.082034931248284 0.0 36 2.71584887930496E-4 0.0 0.0 16.441613322868264 0.0 37 2.71584887930496E-4 0.0 0.0 16.821017411307164 0.0 38 2.71584887930496E-4 0.0 0.0 17.2389865538322 0.0 39 2.71584887930496E-4 0.0 0.0 17.876124700917142 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAAC 20 7.031634E-4 45.0 15 ATTGTCG 20 7.031634E-4 45.0 2 CACGATA 25 3.889435E-5 45.0 27 GGACGTA 20 7.031634E-4 45.0 8 CGTGTAT 25 3.889435E-5 45.0 20 TATAGCG 25 3.889435E-5 45.0 1 CGATCGA 35 1.2111377E-7 45.0 41 CGGTCTA 30 2.1644355E-6 44.999996 31 CCCGCTA 30 2.1644355E-6 44.999996 34 AATCGTT 30 2.1644355E-6 44.999996 22 CGTTTTT 2885 0.0 42.58232 1 TCACGAC 50 1.0804797E-9 40.5 25 GCCGATC 50 1.0804797E-9 40.5 39 GCGATAA 50 1.0804797E-9 40.5 9 CGCCGAT 40 3.4559707E-7 39.375 38 TAATACG 75 0.0 39.000004 4 CGTTATT 425 0.0 38.647057 1 CGGGTAT 70 0.0 38.571426 6 CGACGGT 35 6.2452327E-6 38.571426 28 CGTTGAT 35 6.2452327E-6 38.571426 25 >>END_MODULE