SRR2936014.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936014.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	760177
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13881	1.8260220974851908	No Hit
GCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC	3991	0.525009307042965	No Hit
CCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC	2789	0.3668882378709169	No Hit
CTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGCT	2351	0.30927007788975464	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCG	2075	0.2729627442029948	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTC	2052	0.2699371330624315	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCC	2033	0.2674377151637053	No Hit
TCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC	1730	0.2275785770945451	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGC	1691	0.22244819298663338	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1613	0.21218742477080993	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1180	0.15522700634194403	No Hit
ACTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC	1075	0.1414144337437202	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCGTG	45	3.8380676E-10	45.000004	1
TCACGAC	50	2.1827873E-11	45.0	25
TTAGGCG	25	3.8895545E-5	45.0	1
GCGACTT	25	3.8895545E-5	45.0	1
TAACGCC	40	6.8102963E-9	45.0	12
GCGTTAC	20	7.031779E-4	45.0	26
CGTAGTC	20	7.031779E-4	45.0	40
CCTCACG	20	7.031779E-4	45.0	10
GACGGTC	50	2.1827873E-11	45.0	29
CGAATAT	70	0.0	45.0	14
TCGCGTG	20	7.031779E-4	45.0	41
TAGCACG	30	2.1645283E-6	44.999996	1
TTACGCG	30	2.1645283E-6	44.999996	1
CGTTTTT	5560	0.0	43.66457	1
CGTTATT	620	0.0	43.185482	1
CTCACGA	55	6.002665E-11	40.90909	24
CGACGGT	55	6.002665E-11	40.90909	28
CACGACG	55	6.002665E-11	40.90909	26
CGGTCTA	55	6.002665E-11	40.90909	31
ATAACGC	55	6.002665E-11	40.90909	11