##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936011.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 712204 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.022329276443266 33.0 31.0 34.0 30.0 34.0 2 32.15624736732734 33.0 31.0 34.0 30.0 34.0 3 32.031704399301326 33.0 31.0 34.0 30.0 34.0 4 35.708806746381654 37.0 35.0 37.0 33.0 37.0 5 31.985345490898673 37.0 35.0 37.0 0.0 37.0 6 33.823390489241845 37.0 35.0 37.0 17.0 37.0 7 35.52090552706809 37.0 35.0 37.0 32.0 37.0 8 35.76876569072906 37.0 35.0 37.0 35.0 37.0 9 37.74800197696166 39.0 38.0 39.0 35.0 39.0 10 37.3194604354932 39.0 37.0 39.0 34.0 39.0 11 37.31352955052204 39.0 37.0 39.0 34.0 39.0 12 37.3085674890902 39.0 37.0 39.0 34.0 39.0 13 37.28336544023903 39.0 37.0 39.0 34.0 39.0 14 38.53339071389658 40.0 38.0 41.0 34.0 41.0 15 38.66950480480312 40.0 38.0 41.0 35.0 41.0 16 38.60067480665652 40.0 38.0 41.0 35.0 41.0 17 38.59825274780821 40.0 38.0 41.0 34.0 41.0 18 38.43267799675374 40.0 38.0 41.0 34.0 41.0 19 38.209393656873594 40.0 37.0 41.0 34.0 41.0 20 38.17727364631482 40.0 36.0 41.0 34.0 41.0 21 38.11607067637924 40.0 36.0 41.0 34.0 41.0 22 38.16125576379801 40.0 36.0 41.0 34.0 41.0 23 38.17722169490764 40.0 36.0 41.0 34.0 41.0 24 38.14244654621429 40.0 36.0 41.0 34.0 41.0 25 37.88874816765983 40.0 35.0 41.0 34.0 41.0 26 37.93043425760035 40.0 36.0 41.0 34.0 41.0 27 37.916602546461405 40.0 36.0 41.0 34.0 41.0 28 37.854301576514594 40.0 36.0 41.0 34.0 41.0 29 37.80534650184498 40.0 36.0 41.0 34.0 41.0 30 37.59973687314309 40.0 35.0 41.0 33.0 41.0 31 37.51872356796648 40.0 35.0 41.0 33.0 41.0 32 37.30372056320942 40.0 35.0 41.0 33.0 41.0 33 37.04270405670285 40.0 35.0 41.0 32.0 41.0 34 36.7972448905089 40.0 35.0 41.0 31.0 41.0 35 36.68884055691908 40.0 35.0 41.0 31.0 41.0 36 36.56281065537402 40.0 35.0 41.0 30.0 41.0 37 36.49242773138033 40.0 35.0 41.0 30.0 41.0 38 36.378218881107095 40.0 35.0 41.0 30.0 41.0 39 36.28132810262228 40.0 35.0 41.0 29.0 41.0 40 36.22619923505063 40.0 35.0 41.0 29.0 41.0 41 36.1245640294073 39.0 35.0 41.0 29.0 41.0 42 36.09325558407423 39.0 35.0 41.0 29.0 41.0 43 36.02543653222953 39.0 35.0 41.0 28.0 41.0 44 35.95404827830228 39.0 35.0 41.0 28.0 41.0 45 35.936703528764234 39.0 35.0 41.0 28.0 41.0 46 35.79278408995175 39.0 35.0 41.0 27.0 41.0 47 35.7091423243902 39.0 35.0 41.0 26.0 41.0 48 35.67232702989593 39.0 35.0 41.0 26.0 41.0 49 35.620038640614204 39.0 35.0 41.0 26.0 41.0 50 35.50395953968245 39.0 35.0 41.0 26.0 41.0 51 34.4784850969666 37.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 16.0 9 25.0 10 34.0 11 21.0 12 18.0 13 17.0 14 16.0 15 40.0 16 45.0 17 90.0 18 198.0 19 361.0 20 663.0 21 1253.0 22 1732.0 23 2858.0 24 4676.0 25 7554.0 26 10369.0 27 11124.0 28 10584.0 29 10248.0 30 10868.0 31 12843.0 32 15957.0 33 22802.0 34 37927.0 35 53046.0 36 51641.0 37 78194.0 38 133253.0 39 233555.0 40 173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.511566910604266 19.38166592717817 23.937383109333844 16.169384052883725 2 36.751548713570834 22.557722225654448 24.2875636755761 16.403165385198623 3 30.23431488730757 22.6117797709645 31.73613178246682 15.41777355926111 4 25.725353971614872 24.361840146924195 32.30787807987599 17.60492780158494 5 21.391062111417515 35.93773694053951 27.09293966335488 15.578261284688095 6 23.013209698344856 33.867543568977425 29.34791155343132 13.771335179246396 7 75.10586854328254 5.6242312595829285 15.05004184194416 4.219858355190366 8 75.79752430483401 5.663686247198836 14.022106025801595 4.516683422165559 9 70.38025621872384 7.159184727971199 16.071238016074048 6.389321037230906 10 36.52956175477812 23.930222239695368 24.80511201846662 14.735103987059887 11 27.51753711015383 24.03440587247474 29.856052479345806 18.592004538025623 12 24.43794193798406 21.147732952917984 34.29466838153113 20.11965672756682 13 22.513914552572015 22.513914552572015 36.45388119134405 18.518289703511915 14 19.858495599575402 25.415611257448706 35.125048441176965 19.600844701798923 15 19.33757743567854 24.644062656205246 37.610010614936165 18.40834929318004 16 21.146890497666398 23.507871340233976 35.198061229647685 20.147176932451938 17 21.009710700866606 24.361278510089807 33.251568370860035 21.377442418183552 18 21.803163138651286 24.26523861140909 34.66633155668881 19.26526669325081 19 21.571909172091143 26.84610027464041 32.19288293803461 19.38910761523384 20 22.456346777047028 25.493117140594553 33.54825302862663 18.502283053731798 21 21.887970300644195 26.389629937489822 33.64485456414174 18.07754519772425 22 20.482474122582854 24.08411073231827 33.32486197774795 22.108553167350927 23 19.741534728813654 25.261722764825805 33.81180111316421 21.184941393196333 24 20.51771683394084 24.564871862556235 33.87947835170822 21.037932951794712 25 19.244486130378373 26.803696693643957 32.549943555498146 21.401873620479524 26 18.697311444473776 26.97443429129856 33.38664202953087 20.941612234696798 27 20.7477071176236 26.110636840006514 32.148794446534986 20.992861595834903 28 18.44836591763034 25.60867391927032 34.27711723045645 21.665842932642896 29 19.78815058606804 25.12075191939388 33.696805971322824 21.39429152321526 30 21.402435257313915 25.479076219734797 32.73921516868762 20.379273354263667 31 21.114596379688965 25.962645534144713 30.680114124604746 22.242643961561576 32 21.89807976366322 26.73686191035153 30.51021898220173 20.854839343783524 33 21.769464928587876 25.683652436661408 30.89550185059337 21.651380784157347 34 19.652515290562818 25.36941662782012 31.64739316263318 23.33067491898389 35 20.879270546079496 26.107267019000176 30.66789852345676 22.34556391146357 36 20.842202515009745 27.832615374246707 30.145576267473928 21.179605843269623 37 20.865370034428338 27.112175724932747 30.369248136769798 21.653206103869117 38 20.50788818933901 26.712851935681346 30.289776524703598 22.489483350276043 39 21.4204076360144 25.742624304272372 30.689521541580785 22.147446518132448 40 20.65307131102886 24.9714969306547 31.944639457234164 22.430792301082274 41 19.15925774075967 26.844836591763034 30.351416167277918 23.64448950019938 42 20.351472330961354 26.897770863404308 30.721254022723826 22.029502782910516 43 21.14450354112024 25.97710768263026 30.416285221649975 22.462103554599526 44 20.76567949632409 25.672419699973602 29.835131507264773 23.72676929643754 45 21.021785892805994 24.747123015315836 30.115388287625457 24.115702804252713 46 21.173849065717125 25.65669386861068 30.61608752548427 22.553369540187923 47 19.472370275932178 25.53973299784893 32.28120033024246 22.706696395976433 48 19.963240869189164 25.066273146458034 31.654834850688847 23.315651133663952 49 20.84360660709572 24.089586691453572 31.987323856647816 23.079482844802893 50 20.06447590858799 23.67594116292523 31.969772705573124 24.289810222913662 51 19.17526439053979 23.655441418469987 30.632094175264392 26.53720001572583 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 343.0 1 701.0 2 1059.0 3 9180.0 4 17301.0 5 11219.0 6 5137.0 7 4938.5 8 4740.0 9 4771.0 10 4802.0 11 4875.0 12 4948.0 13 4686.0 14 4424.0 15 4265.0 16 4106.0 17 3922.5 18 3739.0 19 3720.5 20 3702.0 21 3845.5 22 3989.0 23 4364.5 24 4740.0 25 4811.5 26 5705.5 27 6528.0 28 7665.5 29 8803.0 30 10253.5 31 11704.0 32 13186.0 33 14668.0 34 16903.5 35 19139.0 36 21057.0 37 22975.0 38 24549.5 39 26124.0 40 29505.5 41 32887.0 42 36378.0 43 39869.0 44 44010.0 45 48151.0 46 56726.5 47 65302.0 48 67332.0 49 69362.0 50 67778.0 51 66194.0 52 59065.0 53 51936.0 54 46441.5 55 40947.0 56 36193.0 57 31439.0 58 28704.0 59 25969.0 60 23329.5 61 20690.0 62 18131.0 63 15572.0 64 12622.0 65 9672.0 66 7834.5 67 5997.0 68 5113.5 69 4230.0 70 3370.0 71 2510.0 72 2034.0 73 1558.0 74 1284.5 75 767.0 76 523.0 77 360.5 78 198.0 79 156.5 80 115.0 81 95.0 82 75.0 83 95.0 84 115.0 85 65.5 86 16.0 87 10.5 88 5.0 89 3.5 90 2.0 91 2.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 712204.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.48497892386792 #Duplication Level Percentage of deduplicated Percentage of total 1 75.20449123832333 28.942432602870827 2 9.953990323970904 7.661582156528109 3 3.8285236745177955 4.420219587700402 4 2.001599381408956 3.081260400302029 5 1.2954176386643792 2.4927060260802687 6 0.9085465182332991 2.097923616333726 7 0.689037559010853 1.856231715540025 8 0.5657433539512492 1.741809684250574 9 0.48009777155622774 1.6628897357763641 >10 4.934016302944548 38.39214998528501 >50 0.1070507295991196 2.6154601103879327 >100 0.027410912689818774 1.9073884262012428 >500 0.0011112532171548145 0.31647251914549757 >1k 0.002592924173361234 1.4279753262524546 >5k 3.7041773905160485E-4 1.38349810734552 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9705 1.3626713694390933 No Hit GCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 1798 0.2524557570583709 TruSeq Adapter, Index 16 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTC 1682 0.23616828886105665 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCG 1619 0.22732250871941184 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGC 1401 0.19671330124514885 No Hit CTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGCT 1264 0.17747723966728635 TruSeq Adapter, Index 13 (95% over 22bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1137 0.1596452701753992 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCC 1116 0.15669667679485091 No Hit CCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 944 0.13254629291607462 TruSeq Adapter, Index 16 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 735 0.10320076831918945 TruSeq Adapter, Index 16 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18393606326277304 0.0 2 0.0 0.0 0.0 0.7577884988009054 0.0 3 0.0 0.0 0.0 1.0808700877838373 0.0 4 0.0 0.0 0.0 1.4655913193410877 0.0 5 0.0 0.0 0.0 2.593077264379307 0.0 6 0.0 0.0 0.0 3.3858276561209992 0.0 7 0.0 0.0 0.0 4.135612830031845 0.0 8 0.0 0.0 0.0 5.326984964981944 0.0 9 0.0 0.0 0.0 5.798759905869667 0.0 10 0.0 0.0 0.0 7.069884471303166 0.0 11 0.0 0.0 0.0 8.590235381997292 0.0 12 0.0 0.0 0.0 9.912890126986088 0.0 13 1.4040920859753665E-4 0.0 0.0 10.43717811188929 0.0 14 1.4040920859753665E-4 0.0 0.0 10.667027986363458 0.0 15 1.4040920859753665E-4 0.0 0.0 11.03574256814059 0.0 16 1.4040920859753665E-4 0.0 0.0 11.763764314718816 0.0 17 1.4040920859753665E-4 0.0 0.0 12.623349489752936 0.0 18 1.4040920859753665E-4 0.0 0.0 13.571532875412101 0.0 19 1.4040920859753665E-4 0.0 0.0 14.19747712733992 0.0 20 1.4040920859753665E-4 0.0 0.0 14.797445675677194 0.0 21 2.808184171950733E-4 0.0 0.0 15.519008598659935 0.0 22 2.808184171950733E-4 0.0 0.0 16.28704696968846 0.0 23 2.808184171950733E-4 0.0 0.0 17.093136236246917 0.0 24 2.808184171950733E-4 0.0 0.0 17.720203761843518 0.0 25 2.808184171950733E-4 0.0 0.0 18.28422755277982 0.0 26 2.808184171950733E-4 0.0 0.0 18.80065262200156 0.0 27 2.808184171950733E-4 0.0 0.0 19.31539278072013 0.0 28 2.808184171950733E-4 0.0 0.0 19.87857411640485 0.0 29 4.2122762579261E-4 0.0 0.0 20.421676935260123 0.0 30 4.2122762579261E-4 0.0 0.0 21.009289473240813 0.0 31 4.2122762579261E-4 0.0 0.0 21.563203801158096 0.0 32 4.2122762579261E-4 0.0 0.0 22.114871581737816 0.0 33 4.2122762579261E-4 0.0 0.0 22.644073888941932 0.0 34 4.2122762579261E-4 0.0 0.0 23.15993732132928 0.0 35 4.2122762579261E-4 0.0 0.0 23.709218145362847 0.0 36 4.2122762579261E-4 0.0 0.0 24.22817058033934 0.0 37 4.2122762579261E-4 0.0 0.0 24.76986930710864 0.0 38 4.2122762579261E-4 0.0 0.0 25.307496166828606 0.0 39 4.2122762579261E-4 0.0 0.0 25.848071619929122 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTGA 25 3.889305E-5 45.000004 30 TGGAACG 25 3.889305E-5 45.000004 1 AGGGCCG 50 2.1827873E-11 45.000004 6 CCGTTAG 25 3.889305E-5 45.000004 1 TAGTACG 25 3.889305E-5 45.000004 1 CTGTCGT 20 7.0314767E-4 45.0 28 GGTACGA 20 7.0314767E-4 45.0 8 TTGCGAG 35 1.211065E-7 45.0 1 CCGACCG 20 7.0314767E-4 45.0 15 GTATACG 40 6.8084773E-9 45.0 1 TATCACG 30 2.1643355E-6 44.999996 1 CGACGCG 30 2.1643355E-6 44.999996 13 CGTTTTT 4740 0.0 43.860756 1 CGTTATT 595 0.0 43.487396 1 TATACGG 70 0.0 41.785713 2 TAATACG 60 3.6379788E-12 41.249996 4 CGTAAGG 110 0.0 40.90909 2 TTGCGCG 50 1.0804797E-9 40.500004 1 CAACGAC 40 3.4557524E-7 39.375 10 CGCAATC 40 3.4557524E-7 39.375 18 >>END_MODULE