##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936010.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 627538 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07179485545098 33.0 31.0 34.0 30.0 34.0 2 32.21281420408007 33.0 31.0 34.0 30.0 34.0 3 32.06729632309119 33.0 31.0 34.0 30.0 34.0 4 35.77736487670866 37.0 35.0 37.0 35.0 37.0 5 31.83119747330042 37.0 35.0 37.0 0.0 37.0 6 33.76694160353636 37.0 35.0 37.0 17.0 37.0 7 35.540558500043026 37.0 35.0 37.0 32.0 37.0 8 35.83833170262199 37.0 35.0 37.0 35.0 37.0 9 37.84563803307529 39.0 38.0 39.0 35.0 39.0 10 37.438113707855145 39.0 37.0 39.0 34.0 39.0 11 37.384277924205385 39.0 37.0 39.0 34.0 39.0 12 37.40917044067451 39.0 37.0 39.0 35.0 39.0 13 37.42454958902887 39.0 37.0 39.0 35.0 39.0 14 38.704559723873295 40.0 38.0 41.0 35.0 41.0 15 38.839765878719696 40.0 38.0 41.0 35.0 41.0 16 38.76018026000019 40.0 38.0 41.0 35.0 41.0 17 38.75384757576434 40.0 38.0 41.0 35.0 41.0 18 38.566180852792975 40.0 38.0 41.0 35.0 41.0 19 38.29916913398073 40.0 37.0 41.0 34.0 41.0 20 38.27327110071422 40.0 37.0 41.0 34.0 41.0 21 38.16436295491269 40.0 36.0 41.0 34.0 41.0 22 38.222947454974836 40.0 36.0 41.0 34.0 41.0 23 38.22557837134962 40.0 36.0 41.0 34.0 41.0 24 38.1687881849386 40.0 36.0 41.0 34.0 41.0 25 37.90066577641513 40.0 35.0 41.0 34.0 41.0 26 37.95819057969398 40.0 36.0 41.0 34.0 41.0 27 37.932810443351634 40.0 35.0 41.0 34.0 41.0 28 37.86261867807208 40.0 35.0 41.0 34.0 41.0 29 37.809310352520484 40.0 36.0 41.0 34.0 41.0 30 37.5867055062801 40.0 35.0 41.0 33.0 41.0 31 37.478124033923045 40.0 35.0 41.0 33.0 41.0 32 37.229920737867666 40.0 35.0 41.0 33.0 41.0 33 36.90281544703269 40.0 35.0 41.0 31.0 41.0 34 36.61230714315308 40.0 35.0 41.0 30.0 41.0 35 36.4684146617416 40.0 35.0 41.0 30.0 41.0 36 36.309891990604555 40.0 35.0 41.0 29.0 41.0 37 36.23264089186631 40.0 35.0 41.0 29.0 41.0 38 36.085688834779724 40.0 35.0 41.0 27.0 41.0 39 35.99661215735143 40.0 35.0 41.0 27.0 41.0 40 35.925912056321685 40.0 35.0 41.0 26.0 41.0 41 35.80189566209536 39.0 35.0 41.0 25.0 41.0 42 35.751543332834025 39.0 35.0 41.0 25.0 41.0 43 35.65230472098901 39.0 35.0 41.0 24.0 41.0 44 35.559298401053006 39.0 35.0 41.0 24.0 41.0 45 35.51481025850227 39.0 35.0 41.0 23.0 41.0 46 35.38994610684931 39.0 35.0 41.0 23.0 41.0 47 35.323685577606454 39.0 35.0 41.0 23.0 41.0 48 35.263034270434616 39.0 35.0 41.0 23.0 41.0 49 35.20855629459889 39.0 35.0 41.0 23.0 41.0 50 35.07707102996153 39.0 35.0 41.0 23.0 41.0 51 34.0978761445522 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 17.0 10 17.0 11 16.0 12 15.0 13 14.0 14 19.0 15 25.0 16 44.0 17 96.0 18 196.0 19 349.0 20 620.0 21 1003.0 22 1565.0 23 2657.0 24 4512.0 25 7573.0 26 10827.0 27 11651.0 28 10811.0 29 9955.0 30 9982.0 31 11375.0 32 13753.0 33 18602.0 34 30786.0 35 42673.0 36 45472.0 37 69544.0 38 118401.0 39 204779.0 40 181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.1827076607313 19.766930448833378 24.253989399845107 17.796372490590212 2 37.53940000446188 21.723624704798752 24.580981550121265 16.1559937406181 3 29.24014163285729 22.39593458882171 32.94509655192196 15.41882722639904 4 26.49002928906297 24.201881001628585 31.701187816514697 17.606901892793744 5 20.19877680714156 36.82167454401168 27.94954249782483 15.03000615102193 6 23.50869588773907 31.879822417128523 30.390510216114404 14.220971479018004 7 76.18980842594392 5.119689962998257 14.706041705840923 3.984459905216895 8 78.18235708435186 4.243249014402315 14.012856591951403 3.561537309294417 9 72.51895502742464 7.1240307359873025 15.998075016971084 4.358939219616979 10 33.59015709008857 32.45397091490874 22.14320088982659 11.8126711051761 11 24.250164930251238 24.986215974172083 33.95969646459657 16.803922630980118 12 22.263671682033596 23.31476340874975 36.132473252615775 18.289091656600874 13 21.37751020655323 24.33239102651951 37.15233181098196 17.137766955945295 14 18.914870493898377 26.694479059435444 35.65011202508852 18.740538421577657 15 18.094521766012576 26.129094971141193 37.74257495163639 18.03380831120984 16 20.779618126711053 25.401170925107326 36.49261080603884 17.326600142142787 17 20.925426029977466 25.08517412491355 34.36461218284789 19.624787662261088 18 22.02209268602061 24.595482663998038 35.126797102326876 18.255627547654484 19 21.086372458719634 26.71806328859766 33.42968872004563 18.765875532637068 20 22.042649210087674 26.522059221911658 33.72544770197183 17.70984386602883 21 21.261820001338563 26.585322323110315 34.76426925540764 17.38858842014348 22 21.34006227511322 23.986595234073473 34.318399841921924 20.354942648891384 23 18.799020935783968 26.336731799508556 34.583085008397894 20.281162256309578 24 19.115177088877484 25.4833970213756 35.92483642424841 19.476589465498503 25 19.43117388907126 27.486303618266945 33.53071845848379 19.551804034178012 26 20.11575394637456 27.55147895426253 33.2966290487588 19.036138050604105 27 19.89775917952379 26.580382383218225 33.97802204806721 19.543836389190776 28 18.538160238901867 26.714398171903536 35.07962864400243 19.667812945192164 29 19.551485328378522 24.852837597085752 34.64555134509782 20.9501257294379 30 20.10969853618426 25.96049960321128 33.66075042467548 20.26905143592898 31 20.604648642791354 27.018124798816963 31.49514451714478 20.882082041246903 32 20.42075539648595 26.768100099117504 31.810503905739573 21.000640598656975 33 19.816807906453473 26.97079698759278 31.069034863227408 22.143360242726338 34 18.97654006609958 27.5613588340467 31.481918226465964 21.980182873387747 35 19.548298270383626 26.281755049096628 31.110307264261287 23.059639416258456 36 19.465275409616627 28.958405706108636 30.23944366715641 21.336875217118326 37 18.826270281640316 28.704078478116067 30.592410340090957 21.87724090015266 38 18.77671152981971 29.286035267983774 30.643084562209776 21.29416863998674 39 19.950345636439547 27.87241569434839 30.249642252740074 21.92759641647199 40 20.959846256322326 26.690495236941825 31.59187172728982 20.757786779446025 41 19.27548610602067 27.538730722282956 30.7992504039596 22.386532767736774 42 20.37502111425922 27.439135159942506 30.539664530275456 21.646179195522823 43 20.266501789533066 27.165048172381596 30.725788717177288 21.842661320908057 44 20.143640703829888 27.639441754921613 29.7828976093878 22.4340199318607 45 20.341078946613592 26.505805226137703 29.65222823159713 23.50088759565158 46 20.361794823580404 27.30623484155541 29.538450261179406 22.793520073684782 47 19.15517466671341 27.075013784025824 31.185203127141303 22.584608422119455 48 19.52312051222396 26.83789666920569 31.121940025942653 22.5170427926277 49 20.438124862558123 26.32270874433102 30.782518349486406 22.45664804362445 50 18.723647014204715 26.159372022092686 31.185840538740283 23.93114042496231 51 19.172862838585072 25.915562085483266 29.72584927127919 25.185725804652463 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 324.0 1 606.0 2 888.0 3 8874.0 4 16860.0 5 11239.5 6 5619.0 7 5535.0 8 5451.0 9 5291.0 10 5131.0 11 5090.0 12 5049.0 13 4959.0 14 4869.0 15 4650.0 16 4431.0 17 4180.5 18 3930.0 19 3879.0 20 3828.0 21 3986.0 22 4144.0 23 4224.5 24 4305.0 25 5002.0 26 6384.0 27 7069.0 28 8384.5 29 9700.0 30 10919.5 31 12139.0 32 14051.5 33 15964.0 34 18088.5 35 20213.0 36 22478.0 37 24743.0 38 26197.5 39 27652.0 40 29752.0 41 31852.0 42 34389.5 43 36927.0 44 40690.0 45 44453.0 46 47893.5 47 51334.0 48 53956.5 49 56579.0 50 54447.5 51 52316.0 52 46845.0 53 41374.0 54 36903.5 55 32433.0 56 28790.5 57 25148.0 58 22181.0 59 19214.0 60 16696.0 61 14178.0 62 12491.0 63 10804.0 64 9300.0 65 7796.0 66 6289.0 67 4782.0 68 4155.5 69 3529.0 70 3082.5 71 2636.0 72 2169.0 73 1702.0 74 1408.5 75 938.5 76 762.0 77 564.5 78 367.0 79 233.0 80 99.0 81 80.5 82 62.0 83 36.0 84 10.0 85 30.0 86 50.0 87 27.0 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 627538.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.520885195490614 #Duplication Level Percentage of deduplicated Percentage of total 1 75.36615266495834 29.031709144326783 2 9.158608772812823 7.055954341758717 3 3.6434675049215235 4.210487804117479 4 2.0299843218466243 3.127871720419987 5 1.332677237970506 2.566795344325269 6 0.9663681613916271 2.2335214200926523 7 0.7991148690757675 2.154782849077401 8 0.6342508651397181 1.9545523808950143 9 0.5568739392311931 1.9306149373336863 >10 5.416346717897768 40.05579351731738 >50 0.06760238475790309 1.7200024077031486 >100 0.02645310705532394 1.8104181808972306 >500 8.397811763594901E-4 0.2565284762711523 >1k 8.397811763594901E-4 0.35729596726543217 >5k 4.1989058817974506E-4 1.5336715081986545 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9482 1.5109841953794034 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1152 0.1835745405059136 No Hit GCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGC 1057 0.1684360150301655 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCC 796 0.12684490819679448 No Hit CTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGCT 790 0.12588879079832616 Illumina PCR Primer Index 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1870579948943333E-4 0.0 0.0 0.13274096548734898 0.0 2 3.1870579948943333E-4 0.0 0.0 0.5260239220573096 0.0 3 3.1870579948943333E-4 0.0 0.0 0.7639378013761716 0.0 4 3.1870579948943333E-4 0.0 0.0 1.061768370999047 0.0 5 3.1870579948943333E-4 0.0 0.0 1.787302123536742 0.0 6 3.1870579948943333E-4 0.0 0.0 2.55315215970985 0.0 7 3.1870579948943333E-4 0.0 0.0 3.2369354525144294 0.0 8 3.1870579948943333E-4 0.0 0.0 4.354796044223617 0.0 9 3.1870579948943333E-4 0.0 0.0 4.880023201782203 0.0 10 4.7805869923415E-4 0.0 0.0 5.8133531355870085 0.0 11 4.7805869923415E-4 0.0 0.0 6.930257609897727 0.0 12 4.7805869923415E-4 0.0 0.0 7.797296737408731 0.0 13 4.7805869923415E-4 0.0 0.0 8.21990062753172 0.0 14 4.7805869923415E-4 0.0 0.0 8.422756868906744 0.0 15 4.7805869923415E-4 0.0 0.0 8.670231922210288 0.0 16 4.7805869923415E-4 0.0 0.0 9.142713269953374 0.0 17 4.7805869923415E-4 0.0 0.0 9.768492107250875 0.0 18 4.7805869923415E-4 0.0 0.0 10.415783586013914 0.0 19 4.7805869923415E-4 0.0 0.0 10.861174940800398 0.0 20 4.7805869923415E-4 0.0 0.0 11.287762653417005 0.0 21 4.7805869923415E-4 0.0 0.0 11.812511752276356 0.0 22 4.7805869923415E-4 0.0 0.0 12.364988255691289 0.0 23 6.374115989788667E-4 0.0 0.0 12.977700155209725 0.0 24 6.374115989788667E-4 0.0 0.0 13.443488681163531 0.0 25 6.374115989788667E-4 0.0 0.0 13.858443632098773 0.0 26 6.374115989788667E-4 0.0 0.0 14.246627295876904 0.0 27 6.374115989788667E-4 0.0 0.0 14.665247363506273 0.0 28 6.374115989788667E-4 0.0 0.0 15.085301607233347 0.0 29 6.374115989788667E-4 0.0 0.0 15.551408838986642 0.0 30 6.374115989788667E-4 0.0 0.0 16.08779069952736 0.0 31 7.967644987235833E-4 0.0 0.0 16.549754755887292 0.0 32 7.967644987235833E-4 0.0 0.0 17.018092928237014 0.0 33 0.0011154702982130165 0.0 0.0 17.466830693918137 0.0 34 0.0011154702982130165 0.0 0.0 17.89564934713117 0.0 35 0.0011154702982130165 0.0 0.0 18.35856952088957 0.0 36 0.0012748231979577333 0.0 0.0 18.782926292909753 0.0 37 0.0012748231979577333 0.0 0.0 19.22608670709981 0.0 38 0.00143417609770245 0.0 0.0 19.675621237279653 0.0 39 0.0015935289974471666 0.0 0.0 20.14746517342376 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGCG 35 1.2107557E-7 45.000004 1 TAGCGCG 35 1.2107557E-7 45.000004 1 GTAACGT 30 2.163919E-6 45.000004 36 ACGTTGC 20 7.030836E-4 45.0 44 CGATTCA 20 7.030836E-4 45.0 10 TCTAGCG 25 3.8887745E-5 45.0 1 TAGCACG 25 3.8887745E-5 45.0 1 CGCACGG 40 6.8066583E-9 45.0 2 GTAAGCG 25 3.8887745E-5 45.0 1 CCAGTCG 20 7.030836E-4 45.0 28 TCGACTA 20 7.030836E-4 45.0 24 GCGTATG 25 3.8887745E-5 45.0 1 ACCACGG 55 1.8189894E-12 44.999996 2 CGTTATT 730 0.0 44.383564 1 CGTTTTT 5030 0.0 43.479126 1 TACGAAG 65 0.0 41.538464 1 GACACGA 160 0.0 40.78125 25 CACGACC 155 0.0 40.64516 27 GTACGAG 50 1.0804797E-9 40.5 1 ATGAGCG 40 3.4548793E-7 39.375 1 >>END_MODULE