##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936009.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 922092 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05346104293281 33.0 31.0 34.0 30.0 34.0 2 32.201285771918634 33.0 31.0 34.0 30.0 34.0 3 32.06835868872086 33.0 31.0 34.0 30.0 34.0 4 35.75874858473992 37.0 35.0 37.0 35.0 37.0 5 32.12979182120656 37.0 35.0 37.0 0.0 37.0 6 33.8947469449903 37.0 35.0 37.0 17.0 37.0 7 35.53557671034994 37.0 35.0 37.0 32.0 37.0 8 35.787574341822726 37.0 35.0 37.0 35.0 37.0 9 37.737226871071435 39.0 38.0 39.0 35.0 39.0 10 37.34516187104974 39.0 37.0 39.0 34.0 39.0 11 37.3062579438928 39.0 37.0 39.0 34.0 39.0 12 37.259951284687425 39.0 37.0 39.0 34.0 39.0 13 37.24233048329234 39.0 37.0 39.0 34.0 39.0 14 38.50266567761135 40.0 38.0 41.0 34.0 41.0 15 38.61602638348451 40.0 38.0 41.0 35.0 41.0 16 38.53677398784503 40.0 38.0 41.0 34.0 41.0 17 38.51214520893794 40.0 38.0 41.0 34.0 41.0 18 38.3384749027212 40.0 38.0 41.0 34.0 41.0 19 38.103958173370984 40.0 37.0 41.0 34.0 41.0 20 38.08838597450146 40.0 36.0 41.0 34.0 41.0 21 37.99286296812032 40.0 36.0 41.0 34.0 41.0 22 38.036640595515415 40.0 36.0 41.0 34.0 41.0 23 38.040623929065646 40.0 35.0 41.0 34.0 41.0 24 37.998268068695964 40.0 35.0 41.0 34.0 41.0 25 37.73403304659405 40.0 35.0 41.0 33.0 41.0 26 37.78061625087302 40.0 35.0 41.0 34.0 41.0 27 37.76118868833045 40.0 35.0 41.0 34.0 41.0 28 37.65624905107082 40.0 35.0 41.0 33.0 41.0 29 37.60482468126825 40.0 35.0 41.0 33.0 41.0 30 37.39775423710432 40.0 35.0 41.0 33.0 41.0 31 37.291463324700786 40.0 35.0 41.0 33.0 41.0 32 37.05788901758176 40.0 35.0 41.0 32.0 41.0 33 36.77341198058328 40.0 35.0 41.0 31.0 41.0 34 36.49817588700477 40.0 35.0 41.0 30.0 41.0 35 36.37571955943658 40.0 35.0 41.0 30.0 41.0 36 36.23101274059422 40.0 35.0 41.0 29.0 41.0 37 36.177817397830154 40.0 35.0 41.0 29.0 41.0 38 36.040909150063115 39.0 35.0 41.0 28.0 41.0 39 35.962849693956784 39.0 35.0 41.0 28.0 41.0 40 35.88621200487587 39.0 35.0 41.0 27.0 41.0 41 35.77215288713057 39.0 35.0 41.0 27.0 41.0 42 35.75434772235308 39.0 35.0 41.0 27.0 41.0 43 35.67016740195122 39.0 35.0 41.0 26.0 41.0 44 35.604629472981 39.0 35.0 41.0 26.0 41.0 45 35.560252122347876 39.0 35.0 41.0 26.0 41.0 46 35.440302052289795 39.0 35.0 41.0 25.0 41.0 47 35.35109294951046 39.0 35.0 41.0 25.0 41.0 48 35.292611800124064 38.0 35.0 41.0 24.0 41.0 49 35.2510693076179 38.0 35.0 41.0 24.0 41.0 50 35.15854166395544 38.0 35.0 40.0 24.0 41.0 51 34.242341328197185 37.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 25.0 9 28.0 10 49.0 11 17.0 12 22.0 13 25.0 14 42.0 15 36.0 16 77.0 17 176.0 18 305.0 19 581.0 20 1053.0 21 1872.0 22 2777.0 23 4093.0 24 6808.0 25 10682.0 26 14697.0 27 15426.0 28 14792.0 29 13862.0 30 14902.0 31 17663.0 32 21857.0 33 30921.0 34 52353.0 35 70015.0 36 67671.0 37 102483.0 38 169027.0 39 287535.0 40 217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.06877838653843 19.072391908833392 21.591663304746163 19.267166399882008 2 36.68354133860829 23.172308186167974 23.11971039766097 17.024440077562762 3 29.291871093123028 22.959531153073662 31.62764669902786 16.120951054775446 4 26.278722730486763 23.82853337844814 31.655518104484155 18.23722578658095 5 21.55359768873388 35.105390785301246 26.68302078317565 16.657990742789224 6 23.379445868741946 32.683940431106656 29.356289827913052 14.580323872238345 7 74.84502630973915 5.51344117506713 15.124412748402547 4.517119766791166 8 76.75427180801915 5.198071342122044 13.966176910763787 4.081479939095015 9 70.82460318493166 6.88293575912165 15.94721567912963 6.345245376817064 10 37.14531738698525 25.4918164348026 22.94727641059677 14.415589767615378 11 28.81556287225136 23.635819419320413 29.868603132876114 17.680014575552114 12 25.78484576376327 21.25948386928853 33.09301024192814 19.862660125020064 13 23.053990274289333 22.620410978514073 34.94575378595628 19.379844961240313 14 19.803663842653442 25.621521496770388 34.134988699609146 20.439825960967017 15 19.095166209011683 24.787982110244965 36.399621729718945 19.71722995102441 16 22.04769155355431 23.86063429679468 34.55826533577994 19.533408813871066 17 21.407842167592822 24.54310415880411 32.8314311370232 21.217622536579864 18 22.791977373190527 24.122647197893485 32.58048003886814 20.504895390047846 19 22.26675863145977 26.931694451312882 30.498692104475477 20.30285481275187 20 24.696234215240995 25.25507216199685 31.111754575465355 18.9369390472968 21 23.02460058215449 26.523492232879146 31.54208039978657 18.90982678517979 22 22.146488636708703 23.989797113520126 32.17054263565892 21.69317161411226 23 21.726031675798076 25.941988434993473 31.908204387414706 20.42377550179375 24 21.843373546240503 23.777020080425814 32.84140844948226 21.538197923851417 25 20.951922367833145 25.749274475865747 31.295358814521762 22.003444341779346 26 20.747279013373937 25.73712818243733 31.788801985051386 21.726790819137353 27 21.471610208092034 25.07786641680006 31.19038013560469 22.260143239503215 28 19.753018137018866 26.642786186194 32.11588431523102 21.488311361556114 29 21.09182164035693 25.31081497290943 31.184415437938945 22.4129479487947 30 20.91114552560916 25.052706237555473 31.764834745339943 22.271313491495427 31 21.5134715408007 26.29054367676978 29.76926380447938 22.42672097795014 32 22.431058939888864 27.19023698286071 29.16184068400984 21.216863393240587 33 21.677771849229796 27.096320106887383 28.675988946872984 22.549919097009845 34 20.273573569665498 27.623599380539037 30.11792749530416 21.984899554491307 35 20.647505888783332 27.37188913904469 29.323646664324166 22.65695830784781 36 21.098220134216543 29.7657934349284 27.214421120669087 21.92156531018597 37 21.64024847845985 28.764049574229034 28.165844622879277 21.429857324431836 38 21.263821831227254 29.48078933555437 27.94450011495599 21.310888718262387 39 21.957028149035022 26.99079918272797 28.64486406996265 22.40730859827436 40 22.732005049387695 25.42598786238249 30.16521128043623 21.676795807793585 41 19.893242756688053 26.623265357469755 29.76243151442589 23.7210603714163 42 21.7880645315218 26.037748944790756 28.61579972497321 23.558386798714228 43 21.226515358554245 25.993501733015794 28.81827409846306 23.9617088099669 44 21.474972128594544 26.563943727957728 28.228094376699943 23.732989766747785 45 21.281499026127545 25.56979130065113 28.782594361517074 24.366115311704256 46 21.87764344555641 27.08970471493083 27.64149347353626 23.391158365976498 47 20.610199416110323 26.679116617430797 30.03377103369295 22.676912932765926 48 21.042911119497838 25.385536367303914 29.930635988599835 23.640916524598413 49 21.102341198058326 25.435422929599216 29.890943636860527 23.571292235481923 50 19.639038187078945 25.39128416687272 30.450106930761788 24.51957071528654 51 19.366614177327207 25.05877938426968 29.45194188866187 26.12266454974124 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 485.0 1 1061.5 2 1638.0 3 11495.5 4 21353.0 5 14224.5 6 7096.0 7 6896.5 8 6697.0 9 6679.0 10 6661.0 11 6551.0 12 6441.0 13 6273.0 14 6105.0 15 5904.5 16 5704.0 17 5295.0 18 4886.0 19 4773.5 20 4661.0 21 4858.0 22 5055.0 23 5305.5 24 5556.0 25 5687.5 26 7033.0 27 8247.0 28 9955.5 29 11664.0 30 12944.0 31 14224.0 32 16097.0 33 17970.0 34 20928.5 35 23887.0 36 25502.5 37 27118.0 38 29694.5 39 32271.0 40 36228.0 41 40185.0 42 43623.0 43 47061.0 44 52496.5 45 57932.0 46 67299.5 47 76667.0 48 77247.0 49 77827.0 50 75995.0 51 74163.0 52 68102.0 53 62041.0 54 56490.0 55 50939.0 56 47101.0 57 43263.0 58 41426.0 59 39589.0 60 38309.5 61 37030.0 62 33573.5 63 30117.0 64 26210.5 65 22304.0 66 18031.5 67 13759.0 68 11276.0 69 8793.0 70 7511.5 71 6230.0 72 5227.5 73 4225.0 74 3563.5 75 2228.0 76 1554.0 77 1292.0 78 1030.0 79 750.0 80 470.0 81 379.0 82 288.0 83 183.0 84 78.0 85 63.5 86 49.0 87 40.0 88 31.0 89 23.0 90 15.0 91 12.0 92 9.0 93 6.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 922092.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.12554903811429 #Duplication Level Percentage of deduplicated Percentage of total 1 74.55643892026555 26.188358514009607 2 9.134038278537824 6.416762189375868 3 3.765208249664072 3.9676502103686353 4 2.1544645205022808 3.0270699666312106 5 1.390197995055973 2.4415733924013376 6 1.0308315454628623 2.172511440011455 7 0.7604633559099682 1.8698185029793184 8 0.6384441008292697 1.7940559657418642 9 0.5410360641356023 1.7103769921965106 >10 5.869317521926046 42.832275834958914 >50 0.12596805484346885 2.7665817472207075 >100 0.02861489022016731 1.7265013336529023 >500 0.0018661884926096356 0.5097674633169543 >1k 0.0027992827389144532 1.3235818298510291 >5k 0.0 0.0 >10k+ 3.1103141543493924E-4 1.2531146172836405 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11470 1.243910585928519 No Hit GAATCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTC 1878 0.20366731302299554 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTT 1709 0.1853394238318953 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCG 1353 0.14673156257726996 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1334 0.14467103065637701 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTC 1234 0.13382612580957215 No Hit GCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 1226 0.13295853342182776 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCT 1206 0.13078955245246676 No Hit CCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 1091 0.11831791187864119 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGC 1084 0.11755876853936484 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1689809693609748E-4 0.0 0.0 0.10042381888141313 0.0 2 2.1689809693609748E-4 0.0 0.0 0.44865371351231764 0.0 3 2.1689809693609748E-4 0.0 0.0 0.6966766873587451 0.0 4 2.1689809693609748E-4 0.0 0.0 1.001310064505494 0.0 5 2.1689809693609748E-4 0.0 0.0 1.9080525587468495 0.0 6 2.1689809693609748E-4 0.0 0.0 2.8892995492857545 0.0 7 2.1689809693609748E-4 0.0 0.0 3.666879226801664 0.0 8 2.1689809693609748E-4 0.0 0.0 4.65636834502414 0.0 9 2.1689809693609748E-4 0.0 0.0 5.189720765390004 0.0 10 2.1689809693609748E-4 0.0 0.0 6.1645692620692945 0.0 11 2.1689809693609748E-4 0.0 0.0 7.107750636595915 0.0 12 2.1689809693609748E-4 0.0 0.0 7.970896613353115 0.0 13 2.1689809693609748E-4 0.0 0.0 8.344286687228607 0.0 14 2.1689809693609748E-4 0.0 0.0 8.523769862443228 0.0 15 2.1689809693609748E-4 0.0 0.0 8.765068995284635 0.0 16 2.1689809693609748E-4 0.0 0.0 9.146701196843699 1.0844904846804874E-4 17 2.1689809693609748E-4 0.0 0.0 9.603163241845715 1.0844904846804874E-4 18 2.1689809693609748E-4 0.0 0.0 10.112439973451673 1.0844904846804874E-4 19 2.1689809693609748E-4 0.0 0.0 10.47162322197785 1.0844904846804874E-4 20 2.1689809693609748E-4 0.0 0.0 10.785474768244383 1.0844904846804874E-4 21 2.1689809693609748E-4 0.0 0.0 11.158431045926003 1.0844904846804874E-4 22 2.1689809693609748E-4 0.0 0.0 11.596131405543048 1.0844904846804874E-4 23 2.1689809693609748E-4 0.0 0.0 12.059859536792425 1.0844904846804874E-4 24 2.1689809693609748E-4 0.0 0.0 12.41860898912473 1.0844904846804874E-4 25 2.1689809693609748E-4 0.0 0.0 12.756210877005765 1.0844904846804874E-4 26 2.1689809693609748E-4 0.0 0.0 13.075593324744169 1.0844904846804874E-4 27 2.1689809693609748E-4 0.0 0.0 13.401482715390655 1.0844904846804874E-4 28 2.1689809693609748E-4 0.0 0.0 13.72693830984327 1.0844904846804874E-4 29 2.1689809693609748E-4 0.0 0.0 14.066926076790603 1.0844904846804874E-4 30 2.1689809693609748E-4 0.0 0.0 14.467103065637701 1.0844904846804874E-4 31 3.253471454041462E-4 0.0 0.0 14.83561293233213 1.0844904846804874E-4 32 4.3379619387219496E-4 0.0 0.0 15.210195945740772 1.0844904846804874E-4 33 4.3379619387219496E-4 0.0 0.0 15.568620050927674 1.0844904846804874E-4 34 5.422452423402437E-4 0.0 0.0 15.901992425918454 1.0844904846804874E-4 35 5.422452423402437E-4 0.0 0.0 16.25868134632987 1.0844904846804874E-4 36 5.422452423402437E-4 0.0 0.0 16.600512747101156 1.0844904846804874E-4 37 5.422452423402437E-4 0.0 0.0 16.95503268654321 1.0844904846804874E-4 38 5.422452423402437E-4 0.0 0.0 17.345991506270526 1.0844904846804874E-4 39 5.422452423402437E-4 0.0 0.0 17.71797174251593 1.0844904846804874E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACT 20 7.0325605E-4 45.0 17 TGTATCG 20 7.0325605E-4 45.0 40 CGTACTT 20 7.0325605E-4 45.0 10 GGACCGT 30 2.165034E-6 44.999996 8 CGTTTTT 6245 0.0 43.16253 1 CGTTATT 835 0.0 42.574852 1 ATTACGG 80 0.0 42.1875 2 TTACGGG 270 0.0 41.666664 3 AGTAACG 50 1.0804797E-9 40.500004 1 CGCGGAT 40 3.4572258E-7 39.375 23 TCGTGCG 40 3.4572258E-7 39.375 1 TAACGGG 190 0.0 39.078945 3 TACGGGT 70 0.0 38.571426 4 TAAGGGA 805 0.0 38.291927 4 GTAACGG 100 0.0 38.250004 2 ACTCTCG 30 1.1397469E-4 37.499996 44 CGACAGT 30 1.1397469E-4 37.499996 2 CGTTATG 30 1.1397469E-4 37.499996 1 CCGTAAG 30 1.1397469E-4 37.499996 1 GCTTACG 30 1.1397469E-4 37.499996 1 >>END_MODULE