SRR2936008.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936008.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	808053
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8995	1.1131695569473785	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1071	0.13254081106066062	No Hit
GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	1058	0.13093200569764607	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCAACG	20	7.0320413E-4	45.0	1
TACGTCG	35	1.2113378E-7	45.0	1
CGTTTTT	4950	0.0	43.590908	1
CGTTATT	610	0.0	42.786884	1
GTACGAG	45	1.9270374E-8	40.0	1
CTTACGG	45	1.9270374E-8	40.0	2
AATGCGG	120	0.0	39.374996	2
TACGAAT	75	0.0	39.0	12
AAGGGCG	320	0.0	38.671875	5
GTTGCGT	35	6.245986E-6	38.571426	18
GCGTATG	65	9.094947E-12	38.07692	1
TTACGGG	270	0.0	37.500004	3
AACGATA	30	1.139622E-4	37.499996	10
CACGTAG	30	1.139622E-4	37.499996	1
ATACCGG	30	1.139622E-4	37.499996	2
TACGGGA	290	0.0	37.241383	4
GCTACGA	85	0.0	37.058823	10
CTTGCGG	140	0.0	36.964283	2
ACGGGAC	250	0.0	36.9	5
GATACGA	25	0.002106739	36.0	43