##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936007.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 671374 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17605239404564 33.0 31.0 34.0 30.0 34.0 2 32.28752826293541 34.0 31.0 34.0 30.0 34.0 3 32.24186072144587 34.0 31.0 34.0 30.0 34.0 4 35.84787316756383 37.0 35.0 37.0 35.0 37.0 5 32.07647600294322 37.0 35.0 37.0 0.0 37.0 6 33.90167775338336 37.0 35.0 37.0 17.0 37.0 7 35.56204291497735 37.0 35.0 37.0 32.0 37.0 8 35.804305796769015 37.0 35.0 37.0 35.0 37.0 9 37.77267514083059 39.0 38.0 39.0 35.0 39.0 10 37.354178148096295 39.0 37.0 39.0 34.0 39.0 11 37.34110942634061 39.0 37.0 39.0 34.0 39.0 12 37.31711385904131 39.0 37.0 39.0 35.0 39.0 13 37.2671402228862 39.0 37.0 39.0 34.0 39.0 14 38.54318904217322 40.0 38.0 41.0 34.0 41.0 15 38.67203823800147 40.0 38.0 41.0 35.0 41.0 16 38.61692439683396 40.0 38.0 41.0 35.0 41.0 17 38.60110757938198 40.0 38.0 41.0 35.0 41.0 18 38.49790131878804 40.0 38.0 41.0 34.0 41.0 19 38.36445408967282 40.0 37.0 41.0 34.0 41.0 20 38.39499742319482 40.0 37.0 41.0 34.0 41.0 21 38.3356340877067 40.0 37.0 41.0 34.0 41.0 22 38.401269635106516 40.0 37.0 41.0 34.0 41.0 23 38.38624224351852 40.0 37.0 41.0 34.0 41.0 24 38.36515116760554 40.0 37.0 41.0 34.0 41.0 25 38.121570093569304 40.0 37.0 41.0 34.0 41.0 26 38.14533032259218 40.0 37.0 41.0 34.0 41.0 27 38.13265780325124 40.0 37.0 41.0 34.0 41.0 28 38.07389919776458 40.0 37.0 41.0 34.0 41.0 29 38.0495401966713 40.0 37.0 41.0 34.0 41.0 30 37.877951782464024 40.0 36.0 41.0 33.0 41.0 31 37.86280672173781 40.0 36.0 41.0 33.0 41.0 32 37.77050198548052 40.0 36.0 41.0 33.0 41.0 33 37.68931028011213 40.0 36.0 41.0 33.0 41.0 34 37.59429915367589 40.0 36.0 41.0 33.0 41.0 35 37.5433826749323 40.0 36.0 41.0 33.0 41.0 36 37.45348792178428 40.0 36.0 41.0 33.0 41.0 37 37.380063869020844 40.0 36.0 41.0 33.0 41.0 38 37.27367756272957 40.0 36.0 41.0 33.0 41.0 39 37.18573850044834 40.0 35.0 41.0 32.0 41.0 40 37.11478401010465 40.0 35.0 41.0 32.0 41.0 41 37.02856381093102 40.0 35.0 41.0 32.0 41.0 42 36.98999067583791 40.0 35.0 41.0 32.0 41.0 43 36.92250072239914 40.0 35.0 41.0 32.0 41.0 44 36.88312177713167 40.0 35.0 41.0 32.0 41.0 45 36.87651592108124 39.0 35.0 41.0 32.0 41.0 46 36.76779708478434 39.0 35.0 41.0 31.0 41.0 47 36.70511220273648 39.0 35.0 41.0 31.0 41.0 48 36.628028490826274 39.0 35.0 41.0 31.0 41.0 49 36.575765519665644 39.0 35.0 41.0 31.0 41.0 50 36.463279781463086 39.0 35.0 41.0 31.0 41.0 51 35.50539639604751 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 13.0 9 24.0 10 27.0 11 25.0 12 16.0 13 21.0 14 17.0 15 19.0 16 55.0 17 102.0 18 158.0 19 320.0 20 616.0 21 1069.0 22 1619.0 23 2176.0 24 2995.0 25 4143.0 26 5043.0 27 5927.0 28 6163.0 29 6884.0 30 8181.0 31 10562.0 32 14085.0 33 21279.0 34 36809.0 35 50106.0 36 49089.0 37 76664.0 38 128794.0 39 238158.0 40 213.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.71133228275149 19.16159994280386 22.30634489867049 12.820722875774159 2 33.232594649182126 24.847551439287194 24.94109095675436 16.978762954776325 3 32.708445665158315 24.916514491177793 26.158892063142154 16.216147780521737 4 28.55383139650925 25.48147530288632 26.827669823377132 19.137023477227295 5 22.718484778975654 37.272816641693005 22.195229484609175 17.813469094722166 6 24.310146058679663 37.326140124580334 24.099831092654764 14.263882724085233 7 79.60615096801484 6.187758239073899 9.897910851477716 4.308179941433537 8 81.04916186804971 6.652178964332846 8.376106313321637 3.9225528542958172 9 75.45704778558597 7.861341070699789 9.892101868705074 6.78950927500916 10 39.37641314677065 26.944594220211087 18.26820818202671 15.41078445099155 11 30.39989633199975 26.599481064205644 24.517184162627686 18.48343844116692 12 26.98406551340981 23.2408463836848 29.40179393303881 20.373294169866572 13 24.828039215102162 25.14544799173039 30.43996341830336 19.586549374864084 14 21.118184499250788 29.04729703563141 28.991292483772085 20.843225981345718 15 20.582119653129254 26.615567478037576 32.90982373460992 19.892489134223247 16 22.987485365831862 25.38287154402762 30.723709884505507 20.905933205635012 17 22.708952089297473 25.50843494088243 28.83802470754006 22.944588262280043 18 23.256932797516736 25.702514544799172 29.685391450964737 21.355161206719355 19 24.649301283636245 27.388906928180116 27.016238341073677 20.94555344710996 20 26.03288182145868 25.983282045476884 28.252062188884285 19.731773944180144 21 24.788716870179663 27.374607893662844 28.063195774635304 19.773479461522193 22 23.382496194371544 25.040290508717945 28.531191258523563 23.046022038386948 23 23.14492369379809 27.321284410775515 28.091346998841182 21.44244489658521 24 22.336730347019692 26.53126275369615 29.58812822659203 21.54387867269212 25 22.247510329562957 27.301772186590483 28.2011218784165 22.24959560543006 26 21.38107820678191 27.99348798136359 28.600899051795274 22.024534760059222 27 22.52380938195402 28.19054655080477 27.693059308224626 21.592584759016585 28 21.136803033778488 28.120689809256838 29.448414743496176 21.294092413468498 29 22.44173888175592 27.059135444625497 28.943926931933618 21.555198741684965 30 22.007852553122405 28.14243625758519 28.85396217309577 20.995749016196637 31 23.090408624700988 27.367011531575546 27.166676100057497 22.375903743665976 32 23.88623926455299 28.751932603883972 26.75930256459142 20.602525566971615 33 23.70437341928642 28.207079809465363 26.651612960883202 21.436933810365012 34 21.972700759934106 28.16194848177022 27.513874531930043 22.351476226365634 35 22.098413105065134 28.745378879730225 26.68572211613795 22.470485899066688 36 22.9573978140351 29.62685477840965 26.550328133052513 20.865419274502734 37 22.59545350281661 28.883751828340092 27.704677273769914 20.816117395073384 38 22.561493295838087 28.371816602966454 27.10635204818775 21.960338053007714 39 23.075215900526384 28.027746084894563 26.67648732301221 22.220550691566846 40 22.81708853783435 27.629607342554223 27.78927989466378 21.764024224947644 41 20.867206653817398 27.98306160202808 28.07600532639036 23.073726417764167 42 22.041514863548485 28.10475234370113 27.66848284264806 22.185249950102328 43 22.796086830887106 27.30624063487713 27.286877358968326 22.610795175267437 44 22.164992984536187 27.012216737615695 28.0707921367226 22.75199814112551 45 21.57649834518465 27.37579947987262 27.175761944907013 23.87194023003572 46 22.294726933125204 28.76414636253415 27.038580582506917 21.902546121833733 47 22.014704173828598 28.38194508574952 28.153756326578034 21.449594413843847 48 22.150693950018916 27.013855168654132 28.436162258294186 22.399288623032763 49 21.994149311710014 26.171105821792324 29.381536967472677 22.453207899024985 50 21.14186727517002 27.155356031064652 28.5031889825939 23.199587711171418 51 20.773369239797788 26.97646915132251 27.375650531596396 24.874511077283305 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 385.0 1 791.5 2 1198.0 3 3241.5 4 5285.0 5 3541.5 6 1798.0 7 1709.5 8 1621.0 9 1674.5 10 1728.0 11 1684.5 12 1641.0 13 1607.5 14 1574.0 15 1710.0 16 1846.0 17 1758.0 18 1670.0 19 1850.0 20 2030.0 21 2421.5 22 2813.0 23 3365.0 24 3917.0 25 4294.0 26 5273.5 27 5876.0 28 7600.0 29 9324.0 30 10615.0 31 11906.0 32 13725.0 33 15544.0 34 17319.5 35 19095.0 36 21820.5 37 24546.0 38 25887.0 39 27228.0 40 30674.0 41 34120.0 42 37955.5 43 41791.0 44 49539.0 45 57287.0 46 57970.5 47 58654.0 48 57225.5 49 55797.0 50 52142.5 51 48488.0 52 44798.5 53 41109.0 54 38390.0 55 35671.0 56 34131.0 57 32591.0 58 30943.5 59 29296.0 60 27428.0 61 25560.0 62 23622.0 63 21684.0 64 18461.5 65 15239.0 66 13084.5 67 10930.0 68 8617.5 69 6305.0 70 5353.0 71 4401.0 72 3590.5 73 2780.0 74 2286.0 75 1453.0 76 1114.0 77 827.0 78 540.0 79 385.5 80 231.0 81 193.0 82 155.0 83 107.5 84 60.0 85 45.0 86 30.0 87 36.0 88 42.0 89 24.5 90 7.0 91 4.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 671374.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.017198673962834 #Duplication Level Percentage of deduplicated Percentage of total 1 72.13187405138366 20.930649200742643 2 9.205622495646736 5.342427537473659 3 3.7885961212409764 3.298033390363632 4 2.168425244924949 2.51686504566495 5 1.4454679330549516 2.0971715095148973 6 1.0812910306730938 1.882562199684913 7 0.8535570906393265 1.7337484975055728 8 0.7012160129343245 1.6277859488543507 9 0.5821670062963484 1.5203570114814582 >10 7.703268856112529 50.5924063904677 >50 0.2988730539511959 5.168513002477403 >100 0.03703313582986471 1.9639411028166176 >500 0.0 0.0 >1k 0.0026079673119623037 1.3255391629522149 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2711 0.4037987768367557 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTC 1845 0.27480956962885067 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCG 1599 0.23816829367833725 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGC 1524 0.22699717296171731 No Hit GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 1079 0.16071519004310564 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.978965524431986E-4 0.0 0.0 0.07402729328213485 0.0 2 2.978965524431986E-4 0.0 0.0 0.38100969057485096 0.0 3 2.978965524431986E-4 0.0 0.0 0.509254156401648 0.0 4 2.978965524431986E-4 0.0 0.0 0.7262717948565182 0.0 5 2.978965524431986E-4 0.0 0.0 1.4698215897547418 0.0 6 2.978965524431986E-4 0.0 0.0 1.966713039229997 0.0 7 2.978965524431986E-4 0.0 0.0 2.389279298870674 0.0 8 2.978965524431986E-4 0.0 0.0 3.0325869038717617 0.0 9 2.978965524431986E-4 0.0 0.0 3.303374870042629 0.0 10 2.978965524431986E-4 0.0 0.0 4.1225903892614255 0.0 11 2.978965524431986E-4 0.0 0.0 4.853926425509478 0.0 12 2.978965524431986E-4 0.0 0.0 5.690122048217536 0.0 13 2.978965524431986E-4 0.0 0.0 5.960761066112182 0.0 14 2.978965524431986E-4 0.0 0.0 6.0782812560510235 0.0 15 2.978965524431986E-4 0.0 0.0 6.304384739355411 0.0 16 2.978965524431986E-4 0.0 0.0 6.6894160333882455 0.0 17 2.978965524431986E-4 0.0 0.0 7.135367172395714 0.0 18 2.978965524431986E-4 0.0 0.0 7.611554811476167 0.0 19 4.4684482866479787E-4 0.0 0.0 7.9620301054255895 0.0 20 4.4684482866479787E-4 0.0 0.0 8.26945934754697 0.0 21 4.4684482866479787E-4 0.0 0.0 8.628424693241024 0.0 22 5.957931048863972E-4 0.0 0.0 9.036542970088208 0.0 23 5.957931048863972E-4 0.0 0.0 9.464471367672862 0.0 24 5.957931048863972E-4 0.0 0.0 9.801690265038562 0.0 25 5.957931048863972E-4 0.0 0.0 10.091990455394459 0.0 26 5.957931048863972E-4 0.0 0.0 10.368587404337969 0.0 27 7.447413811079964E-4 0.0 0.0 10.649652801568127 0.0 28 7.447413811079964E-4 0.0 0.0 10.945761974696667 0.0 29 7.447413811079964E-4 0.0 0.0 11.260489682352906 0.0 30 7.447413811079964E-4 0.0 0.0 11.642095166032643 0.0 31 7.447413811079964E-4 0.0 0.0 11.978271425464794 0.0 32 7.447413811079964E-4 0.0 0.0 12.3141497883445 0.0 33 8.936896573295957E-4 0.0 0.0 12.631409616696507 0.0 34 8.936896573295957E-4 0.0 0.0 12.935264100188569 0.0 35 8.936896573295957E-4 0.0 0.0 13.251630238883246 0.0 36 8.936896573295957E-4 0.0 0.0 13.556974205137523 0.0 37 0.001042637933551195 0.0 0.0 13.8843625162726 0.0 38 0.001042637933551195 0.0 0.0 14.206537637739919 0.0 39 0.001042637933551195 0.0 0.0 14.545394966144057 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCACG 30 2.1641463E-6 45.000004 1 TCGCCGT 20 7.031188E-4 45.0 39 CGTAATG 20 7.031188E-4 45.0 43 GCGTAAG 75 0.0 42.0 1 TACGAAT 65 0.0 41.538464 12 CGAATAT 65 0.0 41.538464 14 CGTAAGG 190 0.0 40.263157 2 ATAACGG 45 1.9263098E-8 40.0 2 CGTTTTT 1495 0.0 39.73244 1 CGGAAAT 40 3.4553523E-7 39.375 23 TTACGCG 35 6.244407E-6 38.57143 1 GCTACGA 70 0.0 38.57143 10 CGTTATT 195 0.0 38.076923 1 ATCGATT 30 1.1394159E-4 37.500004 43 GCGTTAG 115 0.0 37.173916 1 CGACAGG 80 0.0 36.5625 2 TACGGGA 230 0.0 36.195656 4 GTACGGG 255 0.0 36.17647 3 ACGGGGT 280 0.0 36.160717 5 TTTCGCG 25 0.0021064861 36.0 1 >>END_MODULE