SRR2936005.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936005.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	525375
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5643	1.0740899357601714	No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	1499	0.2853200095170117	No Hit
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	1088	0.20709017368546276	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCC	912	0.1735902926481085	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT	789	0.15017844396859387	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	642	0.12219842969307639	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACGA	25	3.8879036E-5	45.0	13
AGCGTTC	25	3.8879036E-5	45.0	20
CGCATGG	45	3.8380676E-10	45.0	2
CGCGAGG	35	1.2102464E-7	45.0	2
CGACAAT	20	7.029787E-4	45.0	20
AAACGCA	20	7.029787E-4	45.0	10
CCGTAGA	20	7.029787E-4	45.0	39
TTGCGGT	25	3.8879036E-5	45.0	3
AGCGAAG	20	7.029787E-4	45.0	1
CTACCGG	20	7.029787E-4	45.0	2
CGTACCA	20	7.029787E-4	45.0	41
TCGTACC	25	3.8879036E-5	45.0	40
TAGTGCG	35	1.2102464E-7	45.0	1
CGTCATA	90	0.0	45.0	38
TGAGACG	20	7.029787E-4	45.0	1
GCTAACG	30	2.163244E-6	44.999996	1
AACGGGC	115	0.0	43.043476	4
CGTTTTT	3505	0.0	43.009987	1
CGAAAGG	80	0.0	42.1875	2
CGTTATT	435	0.0	41.896553	1