##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936004.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 960830 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11698947784728 33.0 31.0 34.0 30.0 34.0 2 32.251653258120584 34.0 31.0 34.0 30.0 34.0 3 32.12375029922047 33.0 31.0 34.0 30.0 34.0 4 35.79034584681994 37.0 35.0 37.0 35.0 37.0 5 32.0454971222797 37.0 35.0 37.0 0.0 37.0 6 33.876760717296506 37.0 35.0 37.0 17.0 37.0 7 35.576163317132064 37.0 35.0 37.0 32.0 37.0 8 35.84951135997002 37.0 35.0 37.0 35.0 37.0 9 37.836377923253856 39.0 38.0 39.0 35.0 39.0 10 37.391038997533386 39.0 37.0 39.0 34.0 39.0 11 37.349353163410804 39.0 37.0 39.0 34.0 39.0 12 37.39546537889117 39.0 37.0 39.0 35.0 39.0 13 37.40088048874411 39.0 37.0 39.0 35.0 39.0 14 38.68630871225919 40.0 38.0 41.0 35.0 41.0 15 38.812128055951625 40.0 38.0 41.0 35.0 41.0 16 38.733347210224494 40.0 38.0 41.0 35.0 41.0 17 38.730751537733 40.0 38.0 41.0 35.0 41.0 18 38.569954102182486 40.0 38.0 41.0 35.0 41.0 19 38.34484872454024 40.0 37.0 41.0 34.0 41.0 20 38.332602021169194 40.0 37.0 41.0 34.0 41.0 21 38.241643162682266 40.0 37.0 41.0 34.0 41.0 22 38.29889574638594 40.0 37.0 41.0 34.0 41.0 23 38.2957953019785 40.0 37.0 41.0 34.0 41.0 24 38.24942601708939 40.0 36.0 41.0 34.0 41.0 25 37.99311740890688 40.0 36.0 41.0 34.0 41.0 26 38.042215584442616 40.0 36.0 41.0 34.0 41.0 27 38.03901314488515 40.0 36.0 41.0 34.0 41.0 28 37.97223962615655 40.0 36.0 41.0 34.0 41.0 29 37.92082574440848 40.0 36.0 41.0 34.0 41.0 30 37.70547755586316 40.0 36.0 41.0 33.0 41.0 31 37.595758875139204 40.0 36.0 41.0 33.0 41.0 32 37.386321201461236 40.0 36.0 41.0 33.0 41.0 33 37.138497965300836 40.0 36.0 41.0 32.0 41.0 34 36.90485725882831 40.0 36.0 41.0 31.0 41.0 35 36.774204593944816 40.0 36.0 41.0 31.0 41.0 36 36.63724384126224 40.0 35.0 41.0 30.0 41.0 37 36.571932599939636 40.0 35.0 41.0 30.0 41.0 38 36.46027809289885 40.0 35.0 41.0 30.0 41.0 39 36.3850181613813 40.0 35.0 41.0 30.0 41.0 40 36.326599918820186 40.0 35.0 41.0 29.0 41.0 41 36.23879458384938 40.0 35.0 41.0 29.0 41.0 42 36.205288136298826 40.0 35.0 41.0 29.0 41.0 43 36.14383293610732 39.0 35.0 41.0 29.0 41.0 44 36.06795062602125 39.0 35.0 41.0 28.0 41.0 45 36.04435956412685 39.0 35.0 41.0 28.0 41.0 46 35.93104711551471 39.0 35.0 41.0 27.0 41.0 47 35.870173703985095 39.0 35.0 41.0 27.0 41.0 48 35.816285919465464 39.0 35.0 41.0 27.0 41.0 49 35.78148163566916 39.0 35.0 41.0 27.0 41.0 50 35.68199057065246 39.0 35.0 41.0 27.0 41.0 51 34.753783707835936 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 16.0 9 36.0 10 35.0 11 29.0 12 15.0 13 16.0 14 24.0 15 38.0 16 70.0 17 133.0 18 257.0 19 459.0 20 949.0 21 1462.0 22 2298.0 23 3742.0 24 6365.0 25 10319.0 26 14218.0 27 14993.0 28 13724.0 29 12838.0 30 13608.0 31 15979.0 32 20197.0 33 28409.0 34 47731.0 35 66344.0 36 67394.0 37 105142.0 38 181780.0 39 331935.0 40 270.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.55038872641362 19.17935534902116 23.794635887722073 17.475620036843146 2 36.668297201377975 22.867208559266466 24.262044274221246 16.20244996513431 3 30.110217208038883 22.44039007941051 31.213117825213615 16.23627488733699 4 26.63374374238939 24.648064694066587 31.13797445958182 17.5802171039622 5 21.48153159247734 35.634295348813005 26.47044742566323 16.41372563304643 6 23.42911857456574 33.40715839430493 29.276771124964874 13.886951906164462 7 76.39717744033804 5.434155886056847 13.866552876159155 4.3021137974459585 8 78.73983951375372 4.701351956121271 12.806427775985346 3.7523807541396503 9 73.43796509268029 6.541844030681807 14.548359231081461 5.4718316455564455 10 36.0872370762778 27.186703162890417 22.356816502398967 14.369243258432812 11 25.975979101401915 24.906799329746157 31.17950105637834 17.93772051247359 12 23.587419210474277 22.660304112069774 34.98464868915417 18.76762798830178 13 22.526877803565668 23.34231862035948 36.2192063112101 17.911597264864753 14 19.764474464785653 26.577021949772593 34.50214918351841 19.156354401923338 15 19.097759228999927 25.87471248816128 36.96023229915802 18.067295983680776 16 21.17731544602063 24.59498558537931 35.33663603342943 18.891062935170634 17 21.2669254706868 24.392660512265437 33.63664748186464 20.703766535183124 18 22.324969037186598 24.76889772384293 33.75810497174318 19.148028267227293 19 21.947691058772104 26.825452993765808 32.20413600741026 19.02271994005183 20 23.11678444678039 25.66676727412758 32.56580248326967 18.650645795822363 21 22.270745084978614 26.32588491200316 33.120843437444705 18.282526565573516 22 21.536067774736427 24.40098664696148 32.69673095136497 21.366214626937126 23 20.194415245152626 26.373864263189116 32.8550315872735 20.576688904384753 24 20.048395657920757 25.70777348750559 33.99706503751965 20.246765817054005 25 20.36489285305413 26.53664019649678 32.28125683003237 20.817210120416725 26 19.579217967798673 27.42555915198318 32.80340955215803 20.191813328060114 27 20.183487193364073 26.512702559245653 32.91695721407533 20.386853033314946 28 19.21609441836745 26.63707419626781 33.744887232913214 20.401944152451527 29 20.102515533445043 26.06558912606809 33.17923045700072 20.652664883486153 30 21.243195986803077 26.011261097176398 33.1389527804086 19.606590135611917 31 21.505989613146966 26.119604924908675 31.602780928988476 20.771624532955883 32 21.56135840887566 26.77351872859923 31.949772592446113 19.715350270078993 33 22.039590770479688 25.916239084957798 31.825817262158758 20.218352882403757 34 20.669317152878243 26.38104555436446 31.419605965675512 21.530031327081794 35 20.339810372282297 26.454627769740746 31.91272129304872 21.29284056492824 36 21.889512192583496 27.278706951281706 31.075840679412593 19.75594017672221 37 20.668588616092336 27.18722354630892 32.27293069533632 19.87125714226242 38 21.194696252198618 26.710136028225595 31.63306724394534 20.462100475630447 39 21.80531415546975 25.906351800006245 30.823350644755052 21.46498339976895 40 21.398790628935398 25.79217967798674 31.706753536005326 21.10227615707253 41 19.75979101401913 26.467429201835913 31.900232091004654 21.872547693140305 42 20.617174734344264 26.72803721782209 31.792616800058283 20.86217124777536 43 20.851867656089006 25.89021991403266 32.20861130480938 21.04930112506895 44 21.185017120614468 26.278321867552012 30.662864398488804 21.873796613344712 45 21.291487568040132 25.49295921234766 30.492074560536203 22.723478659076008 46 21.23944922618986 26.388851305641996 30.37217822091317 21.99952124725498 47 20.490513410280695 25.929977207206267 32.23442232236712 21.345087060145914 48 20.563887472289583 25.501493500411105 31.991923649344837 21.942695377954475 49 20.685240885484426 24.893789744283588 32.129513025196964 22.291456345035023 50 19.768117148715174 25.33684418679683 32.20163816700145 22.69340049748655 51 20.10220330339394 24.547214387560754 30.902657077734872 24.44792523131043 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 579.0 1 957.5 2 1336.0 3 10348.5 4 19361.0 5 13077.0 6 6793.0 7 6626.0 8 6459.0 9 6374.5 10 6290.0 11 6231.5 12 6173.0 13 6053.5 14 5934.0 15 5657.5 16 5381.0 17 5249.0 18 5117.0 19 4981.0 20 4845.0 21 5291.5 22 5738.0 23 5691.0 24 5644.0 25 6351.5 26 8702.5 27 10346.0 28 12027.0 29 13708.0 30 15932.5 31 18157.0 32 21381.0 33 24605.0 34 27710.0 35 30815.0 36 33042.5 37 35270.0 38 39269.0 39 43268.0 40 46624.0 41 49980.0 42 56859.0 43 63738.0 44 73258.0 45 82778.0 46 85208.5 47 87639.0 48 86292.0 49 84945.0 50 76901.0 51 68857.0 52 61937.0 53 55017.0 54 50266.0 55 45515.0 56 41373.5 57 37232.0 58 34740.5 59 32249.0 60 30353.5 61 28458.0 62 25082.5 63 21707.0 64 17867.5 65 14028.0 66 11716.0 67 9404.0 68 7688.0 69 5972.0 70 4987.0 71 4002.0 72 3361.5 73 2721.0 74 2215.5 75 1359.5 76 1009.0 77 753.5 78 498.0 79 381.0 80 264.0 81 201.0 82 138.0 83 101.0 84 64.0 85 39.0 86 14.0 87 10.5 88 7.0 89 4.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 960830.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.73653228184832 #Duplication Level Percentage of deduplicated Percentage of total 1 74.95020035421501 26.784602544894042 2 9.59431258079739 6.857349225316186 3 3.7607039494100105 4.031835542716959 4 2.04077263556391 2.917205486829694 5 1.3746001534795251 2.456172137972736 6 0.9654803853551367 2.0701752575241117 7 0.7322218050070588 1.8316947720475607 8 0.570003854813628 1.6295968926660163 9 0.48236119944784894 1.5514124918021217 >10 5.29814287286041 41.59565568353942 >50 0.20047123583930085 4.350986985948229 >100 0.026339119895051593 1.5658529554710234 >500 0.0026339119894046863 0.6828382277601908 >1k 0.001463284438558159 0.5981240350069736 >5k 0.0 0.0 >10k+ 2.926568877116318E-4 1.0764977605047699 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10293 1.071261305329767 No Hit GCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 1244 0.1294713945234849 TruSeq Adapter, Index 19 (95% over 21bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1201 0.12499609712436123 No Hit CCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 1132 0.11781480594902323 TruSeq Adapter, Index 19 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTC 1096 0.1140680453358034 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCC 1046 0.1088642111507759 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCG 988 0.10282776349614395 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0815336740110114E-4 0.0 0.0 0.10157884329173736 0.0 2 2.0815336740110114E-4 0.0 0.0 0.4667839263969693 0.0 3 2.0815336740110114E-4 0.0 0.0 0.704911378703829 0.0 4 2.0815336740110114E-4 0.0 0.0 1.0005932370970931 0.0 5 2.0815336740110114E-4 0.0 0.0 1.8091649927666704 0.0 6 2.0815336740110114E-4 0.0 0.0 2.672585160746438 0.0 7 2.0815336740110114E-4 0.0 0.0 3.3938365787912534 0.0 8 2.0815336740110114E-4 0.0 0.0 4.394117585837245 0.0 9 2.0815336740110114E-4 0.0 0.0 4.88275761581133 0.0 10 2.0815336740110114E-4 0.0 0.0 5.85826837213659 0.0 11 2.0815336740110114E-4 0.0 0.0 6.969182893956267 0.0 12 2.0815336740110114E-4 0.0 0.0 7.917009252417181 0.0 13 2.0815336740110114E-4 0.0 0.0 8.339352434874016 0.0 14 2.0815336740110114E-4 0.0 0.0 8.539908204364977 0.0 15 2.0815336740110114E-4 0.0 0.0 8.790733012083303 0.0 16 3.122300511016517E-4 0.0 0.0 9.286866563283828 0.0 17 3.122300511016517E-4 0.0 0.0 9.920173183601678 0.0 18 3.122300511016517E-4 0.0 0.0 10.57856228469136 0.0 19 3.122300511016517E-4 0.0 0.0 11.017349583172882 0.0 20 3.122300511016517E-4 0.0 0.0 11.414506208174183 0.0 21 3.122300511016517E-4 0.0 0.0 11.942487224587076 0.0 22 3.122300511016517E-4 0.0 0.0 12.510745917592082 0.0 23 3.122300511016517E-4 0.0 0.0 13.100340330755701 0.0 24 3.122300511016517E-4 0.0 0.0 13.572224014653997 0.0 25 3.122300511016517E-4 0.0 0.0 13.97926792460685 0.0 26 3.122300511016517E-4 0.0 0.0 14.37423893925044 0.0 27 3.122300511016517E-4 0.0 0.0 14.7827399227751 0.0 28 4.163067348022023E-4 0.0 0.0 15.208309482426651 0.0 29 5.203834185027529E-4 0.0 0.0 15.66343682024916 0.0 30 6.244601022033034E-4 0.0 0.0 16.183195778649708 0.0 31 7.285367859038539E-4 0.0 0.0 16.644255487443147 0.0 32 8.326134696044046E-4 0.0 0.0 17.092409687457717 0.0 33 8.326134696044046E-4 0.0 0.0 17.52953175900003 0.0 34 8.326134696044046E-4 0.0 0.0 17.958744002581103 0.0 35 8.326134696044046E-4 0.0 0.0 18.40096583162474 0.0 36 8.326134696044046E-4 0.0 0.0 18.82039486693796 0.0 37 8.326134696044046E-4 0.0 0.0 19.26136777577719 0.0 38 8.326134696044046E-4 0.0 0.0 19.6975531571662 0.0 39 8.326134696044046E-4 0.0 0.0 20.156219102234527 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATTCG 40 6.8139343E-9 45.000004 10 TATTACG 25 3.8903265E-5 45.0 1 TCGACAG 30 2.1651285E-6 44.999996 1 CGTTTTT 6385 0.0 42.991383 1 CGTTATT 775 0.0 42.967743 1 TATAGCG 50 1.0804797E-9 40.5 1 ATGTACG 40 3.457426E-7 39.375004 1 AGCGAAG 75 0.0 39.0 1 CTTACGG 75 0.0 39.0 2 CTAACGG 35 6.247219E-6 38.571426 2 TCGGAAT 35 6.247219E-6 38.571426 12 CGACAGG 100 0.0 38.25 2 CACGACC 65 9.094947E-12 38.07692 27 GTAGACG 65 9.094947E-12 38.07692 1 GCGATTC 65 9.094947E-12 38.07692 9 TACGGGC 180 0.0 37.5 4 CGTAAGG 150 0.0 37.5 2 TACGCGG 60 1.546141E-10 37.499996 2 CAAGCGT 30 1.1397827E-4 37.499996 35 ATCGATT 30 1.1397827E-4 37.499996 11 >>END_MODULE