##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936002.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 572016 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.087864675113984 33.0 31.0 34.0 30.0 34.0 2 32.210310550753825 33.0 31.0 34.0 30.0 34.0 3 32.15019509943778 33.0 31.0 34.0 30.0 34.0 4 35.78305676764286 37.0 35.0 37.0 35.0 37.0 5 31.999788467455456 37.0 35.0 37.0 0.0 37.0 6 33.82627933484378 37.0 35.0 37.0 17.0 37.0 7 35.495381248076974 37.0 35.0 37.0 32.0 37.0 8 35.72118961707365 37.0 35.0 37.0 35.0 37.0 9 37.66478560040279 39.0 37.0 39.0 35.0 39.0 10 37.3647957399793 39.0 37.0 39.0 34.0 39.0 11 37.314206245979136 39.0 37.0 39.0 34.0 39.0 12 37.19352255880954 39.0 37.0 39.0 34.0 39.0 13 37.091528908282285 39.0 37.0 39.0 33.0 39.0 14 38.31892639366731 40.0 38.0 41.0 34.0 41.0 15 38.450251391569466 40.0 38.0 41.0 34.0 41.0 16 38.41071228776818 40.0 37.0 41.0 34.0 41.0 17 38.370082305390056 40.0 37.0 41.0 34.0 41.0 18 38.25694386171016 40.0 37.0 41.0 34.0 41.0 19 38.09523509831893 40.0 37.0 41.0 34.0 41.0 20 38.092639017090434 40.0 36.0 41.0 34.0 41.0 21 38.040988363961844 40.0 36.0 41.0 34.0 41.0 22 38.1095738580739 40.0 36.0 41.0 34.0 41.0 23 38.09828571228777 40.0 36.0 41.0 34.0 41.0 24 38.071823165785574 40.0 36.0 41.0 34.0 41.0 25 37.844675673407735 40.0 35.0 41.0 34.0 41.0 26 37.84504279600571 40.0 35.0 41.0 34.0 41.0 27 37.811134653576126 40.0 35.0 41.0 34.0 41.0 28 37.74892135884311 40.0 36.0 41.0 33.0 41.0 29 37.70990671589606 40.0 36.0 41.0 33.0 41.0 30 37.540899205616626 40.0 35.0 41.0 33.0 41.0 31 37.51446463035999 40.0 35.0 41.0 33.0 41.0 32 37.326955889345754 40.0 35.0 41.0 33.0 41.0 33 37.17728175435652 40.0 35.0 41.0 33.0 41.0 34 37.05674491622612 40.0 35.0 41.0 32.0 41.0 35 36.98836221364437 40.0 35.0 41.0 32.0 41.0 36 36.8522418953316 40.0 35.0 41.0 31.0 41.0 37 36.7854553019496 40.0 35.0 41.0 31.0 41.0 38 36.69949441973651 39.0 35.0 41.0 31.0 41.0 39 36.599068907163435 39.0 35.0 41.0 31.0 41.0 40 36.520155030628516 39.0 35.0 41.0 31.0 41.0 41 36.41244126038433 39.0 35.0 41.0 30.0 41.0 42 36.37225357332662 39.0 35.0 41.0 30.0 41.0 43 36.284287502447484 39.0 35.0 41.0 30.0 41.0 44 36.25614842941456 39.0 35.0 41.0 30.0 41.0 45 36.232136863304525 39.0 35.0 41.0 30.0 41.0 46 36.10204784481553 39.0 35.0 41.0 30.0 41.0 47 36.0147373500042 39.0 35.0 41.0 30.0 41.0 48 35.971048012643 38.0 35.0 41.0 30.0 41.0 49 35.93695281250874 38.0 35.0 41.0 30.0 41.0 50 35.8244349808397 38.0 35.0 40.0 29.0 41.0 51 34.88471476322341 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 17.0 9 20.0 10 19.0 11 15.0 12 8.0 13 15.0 14 22.0 15 25.0 16 44.0 17 76.0 18 168.0 19 318.0 20 587.0 21 1091.0 22 1759.0 23 2448.0 24 3233.0 25 4408.0 26 5574.0 27 6219.0 28 6426.0 29 7047.0 30 8388.0 31 10277.0 32 13765.0 33 20631.0 34 35606.0 35 49628.0 36 43407.0 37 65425.0 38 106370.0 39 178851.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.68861010880815 18.367143576403457 22.803033481580933 14.141212833207462 2 33.40378590808648 25.058914435959835 23.755104752314622 17.78219490363906 3 30.751587368185508 25.630227126513944 27.27301334228413 16.345172163016418 4 27.551676876171292 24.489349948253196 29.79182400492294 18.167149170652568 5 23.33151520237196 35.61736035355654 23.679932029873292 17.371192414198205 6 24.675533551509048 34.65864591200246 26.077592235182234 14.588228301306257 7 76.140702357976 6.077802019523929 13.011524153170539 4.769971469329529 8 76.1917498811222 7.801704847416856 11.228357248748287 4.778188022712651 9 70.45362367486224 7.693840731727784 12.983727727895722 8.86880786551425 10 40.03122290285586 25.6489328969819 19.538963945064474 14.780880255097758 11 32.25976196470029 23.91524013314313 25.44526726525132 18.37973063690526 12 28.463539481413108 21.187868870800816 29.73133618640038 20.617255461385696 13 25.389674414701684 23.714896086822744 31.131996307795585 19.76343319067998 14 20.28160051467092 28.01215350619563 30.276775474811895 21.429470504321557 15 19.190372297278397 24.638996111996867 35.692008615143635 20.478622975581104 16 21.882779502671255 23.232392100920254 32.7892926071998 22.095535789208693 17 21.242762440211465 24.30771167240077 30.067865234538893 24.381660652848872 18 22.97051131436883 24.256139688400324 30.645121814774413 22.128227182456435 19 23.85982210287824 25.954343934435396 28.094493860311598 22.091340102374758 20 26.61394086878689 24.807697686777992 29.25967105815222 19.318690386282903 21 23.84828396408492 27.408499062963276 28.927687337417137 19.81552963553467 22 21.758657100500685 24.348444798746886 29.849864339459035 24.04303376129339 23 22.05445302229308 26.816382758524238 29.634310928365643 21.49485329081704 24 22.78030684456379 23.93499482531957 30.698791642191825 22.585906687924815 25 21.295732986489888 26.740860395513412 28.80461385695505 23.15879276104165 26 20.61952812508741 26.318319767279235 30.184645184750075 22.877506922883274 27 22.037145814103102 26.6291502335599 28.66475762915723 22.66894632317977 28 18.924470644177784 26.807991384856365 31.35594109255685 22.911596878408997 29 21.191190456211014 25.393170820396634 30.834102542586223 22.58153618080613 30 21.44660289222679 27.279831333389275 29.874513999608403 21.399051774775533 31 23.45843472909849 25.856969035831167 26.673904226455203 24.010692008615145 32 24.205791446393107 27.674575536348634 27.068998069984058 21.0506349472742 33 23.094808536824143 27.79834829794971 26.57862717126794 22.528215993958213 34 21.410415093284104 26.05189365332438 28.539935945847667 23.997755307543844 35 22.026132136164023 26.877744678470535 28.53276831417303 22.563354871192416 36 21.706036194791754 28.771572823137813 27.970196637856283 21.552194344214147 37 21.360416491846383 29.28781712399653 27.790831025705575 21.56093535845151 38 20.863577242594612 29.05320830186568 25.905044614136667 24.178169841403037 39 22.130150205588656 27.108507454336944 27.83278789404492 22.92855444602948 40 23.453364940840814 25.340724734972447 28.317040082794886 22.88887024139185 41 19.87724119605046 25.49911191295348 29.1161436043747 25.507503286621354 42 22.116339403093622 25.34824200721658 28.73311236049341 23.802306229196386 43 21.909701826522333 25.930743195994516 28.61755615227546 23.541998825207685 44 20.90868087605941 25.82078123688848 28.394660289222678 24.875877597829433 45 20.971266537998936 25.77829990769489 27.500978993594583 25.749454560711587 46 22.5448239210092 26.80641800229364 27.394338619898743 23.254419456798413 47 20.25188106626388 26.380555788649268 30.186743028167047 23.180820116919808 48 20.97249027999217 25.546488210119993 29.259321417582722 24.22170009230511 49 21.298530111045842 24.95507118681995 30.425722357416575 23.32067634471763 50 19.89384912310145 25.43635143072921 29.652492237979356 25.017307208189983 51 19.554348130122236 24.806823585354255 28.233301166400942 27.40552711812257 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 443.0 1 818.5 2 1194.0 3 4206.0 4 7218.0 5 4715.0 6 2212.0 7 2160.5 8 2109.0 9 2148.0 10 2187.0 11 2283.0 12 2379.0 13 2231.0 14 2083.0 15 2017.5 16 1952.0 17 2013.5 18 2075.0 19 2101.0 20 2127.0 21 2271.0 22 2415.0 23 2549.0 24 2683.0 25 3219.0 26 4169.5 27 4584.0 28 5603.5 29 6623.0 30 7810.5 31 8998.0 32 10110.5 33 11223.0 34 12991.0 35 14759.0 36 15762.5 37 16766.0 38 18937.5 39 21109.0 40 23345.5 41 25582.0 42 29693.0 43 33804.0 44 42899.5 45 51995.0 46 50642.0 47 49289.0 48 48613.5 49 47938.0 50 43196.5 51 38455.0 52 36153.5 53 33852.0 54 31463.5 55 29075.0 56 28461.0 57 27847.0 58 27186.0 59 26525.0 60 25176.0 61 23827.0 62 22796.5 63 21766.0 64 18510.0 65 15254.0 66 12844.0 67 10434.0 68 8533.0 69 6632.0 70 5690.0 71 4748.0 72 3779.5 73 2811.0 74 2258.5 75 1294.0 76 882.0 77 601.0 78 320.0 79 302.5 80 285.0 81 165.5 82 46.0 83 35.5 84 25.0 85 15.5 86 6.0 87 6.5 88 7.0 89 6.5 90 6.0 91 4.0 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 572016.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.50755062788237 #Duplication Level Percentage of deduplicated Percentage of total 1 74.49629134536204 23.471956711534695 2 9.015929244771737 5.6813969427410145 3 3.5179179778994185 3.3252293638021047 4 1.9806224303513544 2.496182459960589 5 1.2644101881497152 1.9919234008768705 6 0.9798084266836201 1.8522818165615957 7 0.7237672669134337 1.5962893663555344 8 0.5766215610965664 1.4534346423502904 9 0.5084197101170439 1.4417153781053433 >10 6.673086871565542 46.94905388594692 >50 0.21343614021426027 4.110342175994984 >100 0.04347773226586767 2.4494109712213796 >500 0.0033878752414961827 0.6929441990780996 >1k 0.0028232293679134853 2.4878386854706402 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3840 0.6713098934295545 No Hit GAATCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTC 3017 0.5274327990825431 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCG 2776 0.4853011104584487 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGC 2535 0.44316942183435426 No Hit GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 1816 0.31747363710106014 No Hit GAACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT 761 0.13303823669267992 No Hit CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGCT 678 0.11852815305865569 Illumina Single End Adapter 1 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCT 636 0.11118570109926995 No Hit CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 631 0.11031159967553356 No Hit GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC 618 0.1080389359738189 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.748202847472798E-4 0.0 0.0 0.1220245587536013 0.0 2 1.748202847472798E-4 0.0 0.0 0.7029523649688121 0.0 3 1.748202847472798E-4 0.0 0.0 0.9314424771335068 0.0 4 1.748202847472798E-4 0.0 0.0 1.3221658135436771 0.0 5 1.748202847472798E-4 0.0 0.0 2.570907107493497 0.0 6 1.748202847472798E-4 0.0 0.0 3.267915582780901 0.0 7 1.748202847472798E-4 0.0 0.0 3.9574067858241726 0.0 8 1.748202847472798E-4 0.0 0.0 4.891646387513636 0.0 9 1.748202847472798E-4 0.0 0.0 5.273453889401695 0.0 10 3.496405694945596E-4 0.0 0.0 6.587752790131745 0.0 11 3.496405694945596E-4 0.0 0.0 7.718315571592403 0.0 12 3.496405694945596E-4 0.0 0.0 9.047299376241224 0.0 13 3.496405694945596E-4 0.0 0.0 9.444840703756539 0.0 14 3.496405694945596E-4 0.0 0.0 9.610919974266453 0.0 15 3.496405694945596E-4 0.0 0.0 9.947274202120221 0.0 16 3.496405694945596E-4 0.0 0.0 10.480825711168919 0.0 17 5.244608542418394E-4 0.0 0.0 11.099864339459035 0.0 18 5.244608542418394E-4 0.0 0.0 11.742503706190037 0.0 19 5.244608542418394E-4 0.0 0.0 12.227280355794244 0.0 20 6.992811389891192E-4 0.0 0.0 12.658212357696287 0.0 21 8.74101423736399E-4 0.0 0.0 13.160820676344718 0.0 22 8.74101423736399E-4 0.0 0.0 13.708532628457945 0.0 23 8.74101423736399E-4 0.0 0.0 14.243133059215127 0.0 24 8.74101423736399E-4 0.0 0.0 14.648890940113564 0.0 25 8.74101423736399E-4 0.0 0.0 15.04363514307292 0.0 26 0.0010489217084836788 0.0 0.0 15.40166708623535 0.0 27 0.0010489217084836788 0.0 0.0 15.767740762496153 0.0 28 0.0010489217084836788 0.0 0.0 16.139233867584124 0.0 29 0.0010489217084836788 0.0 0.0 16.5199924477637 0.0 30 0.0010489217084836788 0.0 0.0 16.98064389807278 0.0 31 0.0010489217084836788 0.0 0.0 17.372241335906686 0.0 32 0.0010489217084836788 0.0 0.0 17.759992727476156 0.0 33 0.0010489217084836788 0.0 0.0 18.152813907303294 0.0 34 0.0010489217084836788 0.0 0.0 18.51049620989623 0.0 35 0.0010489217084836788 0.0 0.0 18.88373751783167 0.0 36 0.0012237419932309586 0.0 0.0 19.252433498363683 0.0 37 0.0012237419932309586 0.0 0.0 19.624625884590642 0.0 38 0.0012237419932309586 0.0 0.0 20.01534922100081 0.0 39 0.0012237419932309586 0.0 0.0 20.38946463035999 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 25 3.888339E-5 45.000004 40 TTGTCGC 25 3.888339E-5 45.000004 38 TACGGGA 140 0.0 45.000004 4 TTGCGAC 25 3.888339E-5 45.000004 16 TGTCGCA 25 3.888339E-5 45.000004 39 CGGAACA 20 7.030312E-4 45.0 13 ACCGGTA 20 7.030312E-4 45.0 41 AACCCGT 20 7.030312E-4 45.0 43 GTCGTCG 20 7.030312E-4 45.0 42 ACCCGTT 20 7.030312E-4 45.0 44 ACGTAAG 20 7.030312E-4 45.0 1 GCTACGA 40 6.8048394E-9 45.0 10 GTGCGGT 20 7.030312E-4 45.0 31 TACGTTC 20 7.030312E-4 45.0 41 TGCGTTG 20 7.030312E-4 45.0 1 TGCGTCG 20 7.030312E-4 45.0 2 TACCGGA 20 7.030312E-4 45.0 21 TCCGATC 30 2.1635824E-6 44.999996 14 CCCCGTA 30 2.1635824E-6 44.999996 40 CATACGG 30 2.1635824E-6 44.999996 2 >>END_MODULE